Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-20 21:30:12 (31976): vboxwrapper version 26210
2026-01-20 21:30:12 (31976): BOINC client version: 8.2.8
2026-01-20 21:30:13 (31976): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-20 21:30:13 (31976): Successfully copied 'init_data.xml' to the shared directory.
2026-01-20 21:30:14 (31976): Create VM. (boinc_992f502a4906c116, slot#32)
2026-01-20 21:30:14 (31976): Setting Memory Size for VM. (4096MB)
2026-01-20 21:30:14 (31976): Setting CPU Count for VM. (1)
2026-01-20 21:30:15 (31976): Setting Chipset Options for VM.
2026-01-20 21:30:15 (31976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-20 21:30:15 (31976): Setting Boot Options for VM.
2026-01-20 21:30:16 (31976): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-20 21:30:16 (31976): Enabling VM Network Access.
2026-01-20 21:30:16 (31976): Disabling USB Support for VM.
2026-01-20 21:30:16 (31976): Disabling COM Port Support for VM.
2026-01-20 21:30:17 (31976): Disabling LPT Port Support for VM.
2026-01-20 21:30:17 (31976): Disabling Audio Support for VM.
2026-01-20 21:30:17 (31976): Disabling Clipboard Support for VM.
2026-01-20 21:30:17 (31976): Disabling Drag and Drop Support for VM.
2026-01-20 21:30:18 (31976): Adding storage controller(s) to VM.
2026-01-20 21:30:18 (31976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-20 21:30:18 (31976): Adding VirtualBox Guest Additions to VM.
2026-01-20 21:30:19 (31976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-20 21:30:19 (31976): forwarding host port 51392 to guest port 80
2026-01-20 21:30:19 (31976): Enabling remote desktop for VM.
2026-01-20 21:30:20 (31976): Enabling shared directory for VM.
2026-01-20 21:30:20 (31976): Starting VM using VBoxManage interface. (boinc_992f502a4906c116, slot#32)
2026-01-20 21:30:25 (31976): Successfully started VM. (PID = '12604')
2026-01-20 21:30:25 (31976): Reporting VM Process ID to BOINC.
2026-01-20 21:30:25 (31976): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-20 21:30:25 (31976): Guest Log: CPUID EDX: 0x178bfbff
2026-01-20 21:30:25 (31976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-20 21:30:25 (31976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-20 21:30:25 (31976): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-20 21:30:25 (31976): Detected: Web Application Enabled (http://localhost:51392)
2026-01-20 21:30:25 (31976): Detected: Remote Desktop Enabled (localhost:51393)
2026-01-20 21:30:25 (31976): Preference change detected
2026-01-20 21:30:25 (31976): Setting CPU throttle for VM. (100%)
2026-01-20 21:30:25 (31976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-20 21:30:27 (31976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-20 21:30:27 (31976): Guest Log: BIOS: Booting from Hard Disk...
2026-01-20 21:30:29 (31976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-20 21:30:29 (31976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-20 21:30:29 (31976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-20 21:30:32 (31976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-20 21:30:32 (31976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-20 21:30:36 (31976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000094 main     Log opened 2026-01-20T21:30:34.991240000Z
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000187 main     OS Product: Linux
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000206 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000214 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000215 main     Process ID: 1241
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000215 main     Package type: LINUX_64BITS_GENERIC
2026-01-20 21:30:36 (31976): Guest Log: 00:00:00.000842 main     5.2.32 r132073 started. Verbose level = 0
2026-01-20 21:30:36 (31976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-20 21:30:36 (31976): Guest Log: [INFO] Mounting shared directory
2026-01-20 21:30:36 (31976): Guest Log: [INFO] Checking for init_data.xml
2026-01-20 21:30:46 (31976): Guest Log: 00:00:10.009904 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 103 861 000ns (GuestNow=1 768 941 045 896 570 000 ns GuestLast=1 768 944 635 000 431 000 ns fSetTimeLastLoop=true )
2026-01-20 21:31:37 (31976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-20 21:31:37 (31976): Guest Log: [INFO] Detected branch: prod
2026-01-20 21:31:37 (31976): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-20 21:31:37 (31976): Guest Log: Copying input files
2026-01-20 21:31:37 (31976): Guest Log: Copied input files into RunAtlas.
2026-01-20 21:31:37 (31976): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-20 21:31:45 (31976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-20 21:31:46 (31976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-20 21:31:46 (31976): Guest Log: 2.6.3.0 1535 0 31544 155359 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-20 21:31:46 (31976): Guest Log: copied the webapp to /var/www
2026-01-20 21:31:46 (31976): Guest Log: core_number=1
2026-01-20 21:31:46 (31976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-20 21:31:46 (31976): Guest Log:  *** Starting ATLAS job. (PandaID=6976712655 taskID=48298244) ***
2026-01-20 23:10:28 (31976): Status Report: Elapsed Time: '6000.000000'
2026-01-20 23:10:28 (31976): Status Report: CPU Time: '5870.343750'
2026-01-21 00:50:30 (31976): Status Report: Elapsed Time: '12000.000000'
2026-01-21 00:50:30 (31976): Status Report: CPU Time: '11851.906250'
2026-01-21 02:30:33 (31976): Status Report: Elapsed Time: '18000.000000'
2026-01-21 02:30:33 (31976): Status Report: CPU Time: '17831.125000'
2026-01-21 03:19:46 (31976): Guest Log:  *** Job finished ***
2026-01-21 03:19:46 (31976): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:23,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:23,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:31,002 | INFO     | [monitor] cgroup control has ended
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:31,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528369465152)>', '<ExcThread(monitor, started 140528058341120)>']
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:32,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:32,734 | INFO     | [monitor] control thread has ended
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:36,896 | INFO     | all workflow threads have been joined
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:36,896 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:36,896 | INFO     | traces error code: 0
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:36,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,009 [wrapper] ==== pilot stdout END ====
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,010 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,012 [wrapper] pilotpid: 5863
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,014 [wrapper] Pilot exit status: 0
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,046 [wrapper] pandaids: 6976712655
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,057 [wrapper] cleanup supervisor_pilot 29810 5864
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,058 [wrapper] Test setup, not cleaning
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,060 [wrapper] apfmon messages muted
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,061 [wrapper] ==== wrapper stdout END ====
2026-01-21 03:19:46 (31976): Guest Log: 2026-01-21 02:19:37,062 [wrapper] ==== wrapper stderr END ====
2026-01-21 03:19:46 (31976): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 03:19:46 (31976): Guest Log:     "exeErrorCode": 0,
2026-01-21 03:19:46 (31976): Guest Log:     "exeErrorDiag": "",
2026-01-21 03:19:46 (31976): Guest Log:     "pilotErrorCode": 0,
2026-01-21 03:19:46 (31976): Guest Log:     "pilotErrorDiag": "",
2026-01-21 03:19:46 (31976): Guest Log:  *** Listing of results directory ***
2026-01-21 03:19:46 (31976): Guest Log: total 177896
2026-01-21 03:19:46 (31976): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 20 18:02 pilot3.tar.gz
2026-01-21 03:19:46 (31976): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 20 18:05 queuedata.json
2026-01-21 03:19:46 (31976): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 20 18:05 runpilot2-wrapper.sh
2026-01-21 03:19:46 (31976): Guest Log: -rwxr-xr-x. 1 atlas atlas      9356 Jan 20 20:31 init_data.xml
2026-01-21 03:19:46 (31976): Guest Log: -rwxr-xr-x. 1 atlas atlas    597771 Jan 20 20:31 input.tar.gz
2026-01-21 03:19:46 (31976): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 20 20:31 start_atlas.sh
2026-01-21 03:19:46 (31976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 20 20:31 EVNT.48298242._000009.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 03:19:46 (31976): Guest Log: -rw-r--r--. 1 atlas atlas      2617 Jan 20 20:31 pandaJob.out
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas        50 Jan 20 20:31 setup.sh.local
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas   1003869 Jan 20 20:31 agis_schedconf.cvmfs.json
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas       424 Jan 20 20:32 workernode_map.json
2026-01-21 03:19:46 (31976): Guest Log: drwx------. 5 atlas atlas      4096 Jan 20 20:32 pilot3
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas        95 Jan 21 02:18 pilot_heartbeat.json
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas 171384765 Jan 21 02:18 HITS.48298244._000209.pool.root.1
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas      1037 Jan 21 02:18 memory_monitor_summary.json
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 21 02:18 agis_ddmendpoints.agis.ALL.json
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas    447403 Jan 21 02:18 log.48298244._000209.job.log.tgz.1
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas      6346 Jan 21 02:18 heartbeat.json
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas      5059 Jan 21 02:19 pilotlog.txt
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas   3003948 Jan 21 02:19 log.48298244._000209.job.log.1
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas       357 Jan 21 02:19 output.list
2026-01-21 03:19:46 (31976): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 21 02:19 runtime_log
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas   3471360 Jan 21 02:19 result.tar.gz
2026-01-21 03:19:46 (31976): Guest Log: -rw-r--r--. 1 atlas atlas      9114 Jan 21 02:19 runtime_log.err
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas       655 Jan 21 02:19 j2eLDm9HV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKWpKDmX8qjgn.diag
2026-01-21 03:19:46 (31976): Guest Log: Looking for outputfile HITS.48298244._000209.pool.root.1
2026-01-21 03:19:46 (31976): Guest Log: HITS file was successfully produced
2026-01-21 03:19:46 (31976): Guest Log: -rw-------. 1 atlas atlas 171384765 Jan 21 02:18 /home/atlas/RunAtlas/HITS.48298244._000209.pool.root.1
2026-01-21 03:19:47 (31976): Guest Log: Successfully finished the ATLAS job!
2026-01-21 03:19:47 (31976): Guest Log: Copying the results back to the shared directory!
2026-01-21 03:19:47 (31976): Guest Log:  *** Contents of shared directory: ***
2026-01-21 03:19:47 (31976): Guest Log: total 425180
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root 259895772 Jan 20 20:30 ATLAS.root_0
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root 171384765 Jan 21  2026 HITS.pool.root.1
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root      9356 Jan 20 20:30 init_data.xml
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root    597771 Jan 20 20:25 input.tar.gz
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root   3471360 Jan 21  2026 result.tar.gz
2026-01-21 03:19:47 (31976): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 20 20:25 start_atlas.sh
2026-01-21 03:19:47 (31976): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 03:19:47 (31976): VM Completion File Detected.
2026-01-21 03:19:47 (31976): Powering off VM.
2026-01-21 03:19:47 (31976): Successfully stopped VM.
2026-01-21 03:19:47 (31976): Deregistering VM. (boinc_992f502a4906c116, slot#32)
2026-01-21 03:19:47 (31976): Removing network bandwidth throttle group from VM.
2026-01-21 03:19:48 (31976): Removing VM from VirtualBox.
2026-01-21 03:19:53 (31976): called boinc_finish(0)

</stderr_txt>
]]>

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