Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
02:58:45 (1195512): wrapper (7.7.26015): starting
02:58:45 (1195512): wrapper: running run_atlas (--nthreads 4)
[2026-01-21 02:58:45] Arguments: --nthreads 4
[2026-01-21 02:58:45] Threads: 4
[2026-01-21 02:58:45] Checking for CVMFS
[2026-01-21 02:58:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 02:58:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 02:58:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 02:58:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 02:58:45] 2.13.3.0 80730 1539 47688 155365 3 50 18349491 33554433 0 130560 0 275865 99.973 50946 221 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-21 02:58:45] CVMFS is ok
[2026-01-21 02:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 02:58:45] Checking for apptainer binary...
[2026-01-21 02:58:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 02:58:45] Running /usr/bin/apptainer --version
[2026-01-21 02:58:45] apptainer version 1.4.5
[2026-01-21 02:58:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 02:58:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-21 02:58:45] apptainer works
[2026-01-21 02:58:45] Set ATHENA_PROC_NUMBER=4
[2026-01-21 02:58:45] Set ATHENA_CORE_NUMBER=4
[2026-01-21 02:58:45] Starting ATLAS job with PandaID=6976709729
[2026-01-21 02:58:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 03:55:03]  *** The last 200 lines of the pilot log: ***
[2026-01-21 03:55:03]  lfn=log.48298321._000323.job.log.tgz.1
[2026-01-21 03:55:03]  mtime=0
[2026-01-21 03:55:03]  protocol_id=None
[2026-01-21 03:55:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 03:55:03]  replicas=None
[2026-01-21 03:55:03]  scope=mc23_13p6TeV
[2026-01-21 03:55:03]  status=None
[2026-01-21 03:55:03]  status_code=0
[2026-01-21 03:55:03]  storage_token=
[2026-01-21 03:55:03]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/log.48298321._000323.job.log.tgz.1
[2026-01-21 03:55:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/f0/log.48298321._000323.job.log.tgz.1
[2026-01-21 03:55:03]  workdir=None
[2026-01-21 03:55:03] ]
[2026-01-21 03:55:03] 2026-01-21 01:54:10,308 | INFO     | transferring file log.48298321._000323.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/log.48298321._000323.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-21 03:55:03] 2026-01-21 01:54:10,309 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/log.48298321._000323.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298321._000323.job
[2026-01-21 03:55:03] 2026-01-21 01:54:10,317 | INFO     | adding to output.list: log.48298321._000323.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/f0/log.48298321._000323.job.log.tg
[2026-01-21 03:55:03] 2026-01-21 01:54:10,317 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 03:55:03] 2026-01-21 01:54:10,317 | INFO     | summary of transferred files:
[2026-01-21 03:55:03] 2026-01-21 01:54:10,317 | INFO     |  -- lfn=log.48298321._000323.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 03:55:03] 2026-01-21 01:54:10,318 | INFO     | stage-out finished correctly
[2026-01-21 03:55:03] 2026-01-21 01:54:11,412 | INFO     | time since job start (3319s) is within the limit (349056.0s)
[2026-01-21 03:55:03] 2026-01-21 01:54:11,744 | WARNING  | process 1204152 can no longer be monitored (due to stat problems) - aborting
[2026-01-21 03:55:03] 2026-01-21 01:54:11,744 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 03:55:03] 2026-01-21 01:54:11,830 | INFO     | number of running child processes to parent process 1204152: 1
[2026-01-21 03:55:03] 2026-01-21 01:54:11,830 | INFO     | maximum number of monitored processes: 6
[2026-01-21 03:55:03] 2026-01-21 01:54:13,180 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 03:55:03] 2026-01-21 01:54:13,417 | INFO     | time since job start (3321s) is within the limit (349056.0s)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,333 | INFO     | monitor loop #255: job 0:6976709729 is in state 'finished'
[2026-01-21 03:55:03] 2026-01-21 01:54:14,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,942 | INFO     | job 6976709729 has state=finished
[2026-01-21 03:55:03] 2026-01-21 01:54:14,942 | INFO     | preparing for final server update for job 6976709729 in state='finished'
[2026-01-21 03:55:03] 2026-01-21 01:54:14,942 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/jobReport.json
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | this job has now completed (state=finished)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | log transfer has been attempted: DONE
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | job 6976709729 has finished - writing final server update
[2026-01-21 03:55:03] 2026-01-21 01:54:14,943 | INFO     | total number of processed events: 400 (read)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976709729/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | INFO     | extracted standard info from prmon json
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 03:55:03] 2026-01-21 01:54:14,945 | INFO     | fitting pss+swap vs Time
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | sum of square deviations: 34277852.0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | sum of deviations: -4986110903.0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | mean x: 1768958886.5
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | mean y: 2482249.875
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | intersect: 257318057068.75192
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | chi2: 0.10789353908660144
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | current memory leak: -145.46 B/s (using 48 data points, chi2=0.11)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | could have reported an average CPU frequency of 3836 MHz (5 samples)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | ..............................
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . Timing measurements:
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . get job = 0 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . initial setup = 3 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . payload setup = 2 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . stage-in = 0 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . payload execution = 3300 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . stage-out = 0 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | . log creation = 0 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,946 | INFO     | ..............................
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | 
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | job summary report
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | --------------------------------------------------
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | PanDA job id: 6976709729
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | task id: 48298321
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | errors: (none)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | pilot state: finished 
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | transexitcode: 0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | exeerrorcode: 0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | exeerrordiag: 
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | exitcode: 0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | exitmsg: OK
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | cpuconsumptiontime: 12540 s
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | nevents: 400
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | neventsw: 0
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | pid: 1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | pgrp: 1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | corecount: 4
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | event service: False
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | sizes: {0: 2284388, 10: 2284388, 3307: 2319093, 3310: 2319093, 3312: 2319319}
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | --------------------------------------------------
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | 
[2026-01-21 03:55:03] 2026-01-21 01:54:14,975 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | job 6976709729 has completed (purged errors)
[2026-01-21 03:55:03] 2026-01-21 01:54:14,985 | INFO     | overall cleanup function is called
[2026-01-21 03:55:03] 2026-01-21 01:54:15,991 | INFO     | --- collectZombieJob: --- 10, [1204152]
[2026-01-21 03:55:03] 2026-01-21 01:54:15,991 | INFO     | zombie collector waiting for pid 1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:15,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 03:55:03] 2026-01-21 01:54:15,991 | INFO     | collected zombie processes
[2026-01-21 03:55:03] 2026-01-21 01:54:15,991 | INFO     | will attempt to kill all subprocesses of pid=1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:16,077 | INFO     | process IDs to be killed: [1204152] (in reverse order)
[2026-01-21 03:55:03] 2026-01-21 01:54:16,113 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 03:55:03] 2026-01-21 01:54:16,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 03:55:03] 2026-01-21 01:54:16,116 | INFO     | did not find any defunct processes belonging to 1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:16,118 | INFO     | did not find any defunct processes belonging to 1204152
[2026-01-21 03:55:03] 2026-01-21 01:54:16,118 | INFO     | ready for new job
[2026-01-21 03:55:03] 2026-01-21 01:54:16,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 03:55:03] 2026-01-21 01:54:16,119 | INFO     | **************************************
[2026-01-21 03:55:03] 2026-01-21 01:54:16,119 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 03:55:03] 2026-01-21 01:54:16,119 | INFO     | **************************************
[2026-01-21 03:55:03] 2026-01-21 01:54:16,119 | INFO     | 
[2026-01-21 03:55:03] 2026-01-21 01:54:16,120 | INFO     | architecture information:
[2026-01-21 03:55:03] 2026-01-21 01:54:16,120 | INFO     | executing command: cat /etc/os-release
[2026-01-21 03:55:03] 2026-01-21 01:54:16,127 | INFO     | cat /etc/os-release:
[2026-01-21 03:55:03] NAME="CentOS Linux"
[2026-01-21 03:55:03] VERSION="7 (Core)"
[2026-01-21 03:55:03] ID="centos"
[2026-01-21 03:55:03] ID_LIKE="rhel fedora"
[2026-01-21 03:55:03] VERSION_ID="7"
[2026-01-21 03:55:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 03:55:03] ANSI_COLOR="0;31"
[2026-01-21 03:55:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 03:55:03] HOME_URL="https://www.centos.org/"
[2026-01-21 03:55:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 03:55:03] 
[2026-01-21 03:55:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 03:55:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 03:55:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 03:55:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 03:55:03] 
[2026-01-21 03:55:03] 2026-01-21 01:54:16,127 | INFO     | **************************************
[2026-01-21 03:55:03] 2026-01-21 01:54:16,630 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | INFO     | sufficient remaining disk space (74119643136 B)
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | INFO     | update_server=False
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 03:55:03] 2026-01-21 01:54:16,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 03:55:03] 2026-01-21 01:54:16,836 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-21 03:55:03] 2026-01-21 01:54:16,836 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-21 03:55:03] 2026-01-21 01:54:16,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 03:55:03] 2026-01-21 01:54:16,836 | INFO     | will abort loop
[2026-01-21 03:55:03] 2026-01-21 01:54:17,021 | INFO     | all payload control threads have been joined
[2026-01-21 03:55:03] 2026-01-21 01:54:17,443 | INFO     | all job control threads have been joined
[2026-01-21 03:55:03] 2026-01-21 01:54:17,463 | INFO     | all data control threads have been joined
[2026-01-21 03:55:03] 2026-01-21 01:54:17,640 | INFO     | [job] retrieve thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:17,642 | INFO     | [job] queue monitor thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:17,685 | INFO     | [payload] failed_post thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:17,841 | INFO     | [job] job monitor thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,027 | INFO     | [payload] control thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,449 | INFO     | [job] control thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,469 | INFO     | [data] control thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,549 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,643 | INFO     | [data] copytool_out thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,730 | INFO     | [job] validate thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,829 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:18,873 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:19,037 | INFO     | [data] copytool_in thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:19,080 | INFO     | [payload] validate_post thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:19,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 03:55:03] 2026-01-21 01:54:23,217 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:27,599 | INFO     | job.realtimelogging is not enabled
[2026-01-21 03:55:03] 2026-01-21 01:54:28,604 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 03:55:03] 2026-01-21 01:54:46,585 | INFO     | PID=1199547 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-21 03:55:03] 2026-01-21 01:54:46,585 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 03:55:03] 2026-01-21 01:54:46,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 03:55:03] 2026-01-21 01:54:46,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 03:55:03] 2026-01-21 01:54:57,533 | INFO     | [monitor] cgroup control has ended
[2026-01-21 03:55:03] 2026-01-21 01:54:58,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596327851840)>', '<ExcThread(monitor, started 140595586643712)>']
[2026-01-21 03:55:03] 2026-01-21 01:54:59,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 03:55:03] 2026-01-21 01:54:59,650 | INFO     | [monitor] control thread has ended
[2026-01-21 03:55:03] 2026-01-21 01:55:03,767 | INFO     | all workflow threads have been joined
[2026-01-21 03:55:03] 2026-01-21 01:55:03,767 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 03:55:03] 2026-01-21 01:55:03,767 | INFO     | traces error code: 0
[2026-01-21 03:55:03] 2026-01-21 01:55:03,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 03:55:03] 2026-01-21 01:55:03,822 [wrapper] ==== pilot stdout END ====
[2026-01-21 03:55:03] 2026-01-21 01:55:03,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 03:55:03] 2026-01-21 01:55:03,824 [wrapper] pilotpid: 1199547
[2026-01-21 03:55:03] 2026-01-21 01:55:03,826 [wrapper] Pilot exit status: 0
[2026-01-21 03:55:03] 2026-01-21 01:55:03,831 [wrapper] pandaids: 6976709729
[2026-01-21 03:55:03] 2026-01-21 01:55:03,854 [wrapper] cleanup supervisor_pilot 1238357 1199548
[2026-01-21 03:55:03] 2026-01-21 01:55:03,855 [wrapper] Test setup, not cleaning
[2026-01-21 03:55:03] 2026-01-21 01:55:03,857 [wrapper] apfmon messages muted
[2026-01-21 03:55:03] 2026-01-21 01:55:03,858 [wrapper] ==== wrapper stdout END ====
[2026-01-21 03:55:03] 2026-01-21 01:55:03,859 [wrapper] ==== wrapper stderr END ====
[2026-01-21 03:55:03]  *** Error codes and diagnostics ***
[2026-01-21 03:55:03]     "exeErrorCode": 0,
[2026-01-21 03:55:03]     "exeErrorDiag": "",
[2026-01-21 03:55:03]     "pilotErrorCode": 0,
[2026-01-21 03:55:03]     "pilotErrorDiag": "",
[2026-01-21 03:55:03]  *** Listing of results directory ***
[2026-01-21 03:55:03] total 435404
[2026-01-21 03:55:03] -rw-r--r-- 1 ek ek    584422 Jan 20 20:02 pilot3.tar.gz
[2026-01-21 03:55:03] -rwx------ 1 ek ek     36322 Jan 20 20:03 runpilot2-wrapper.sh
[2026-01-21 03:55:03] -rw-r--r-- 1 ek ek      5111 Jan 20 20:03 queuedata.json
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek       100 Jan 21 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 03:55:03] -rwxr-xr-x 1 ek ek      7986 Jan 21 02:58 run_atlas
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek       105 Jan 21 02:58 job.xml
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek 264552480 Jan 21 02:58 EVNT.48298318._000017.pool.root.1
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek    597781 Jan 21 02:58 input.tar.gz
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek     15845 Jan 21 02:58 start_atlas.sh
[2026-01-21 03:55:03] drwxrwx--x 2 ek ek      4096 Jan 21 02:58 shared
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek         0 Jan 21 02:58 boinc_setup_complete
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek      9841 Jan 21 02:58 init_data.xml
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek         0 Jan 21 02:58 boinc_lockfile
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek      2633 Jan 21 02:58 pandaJob.out
[2026-01-21 03:55:03] -rw------- 1 ek ek        50 Jan 21 02:58 setup.sh.local
[2026-01-21 03:55:03] -rw------- 1 ek ek   1002345 Jan 21 02:58 agis_schedconf.cvmfs.json
[2026-01-21 03:55:03] -rw------- 1 ek ek   1516246 Jan 21 02:58 agis_ddmendpoints.agis.ALL.json
[2026-01-21 03:55:03] -rw------- 1 ek ek       433 Jan 21 02:58 workernode_map.json
[2026-01-21 03:55:03] drwx------ 5 ek ek      4096 Jan 21 02:58 pilot3
[2026-01-21 03:55:03] -rw------- 1 ek ek 175833073 Jan 21 03:53 HITS.48298321._000323.pool.root.1
[2026-01-21 03:55:03] -rw------- 1 ek ek      1019 Jan 21 03:54 memory_monitor_summary.json
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek       529 Jan 21 03:54 boinc_task_state.xml
[2026-01-21 03:55:03] -rw------- 1 ek ek    260337 Jan 21 03:54 log.48298321._000323.job.log.tgz.1
[2026-01-21 03:55:03] -rw------- 1 ek ek        95 Jan 21 03:54 pilot_heartbeat.json
[2026-01-21 03:55:03] -rw------- 1 ek ek      6309 Jan 21 03:54 heartbeat.json
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek      8192 Jan 21 03:54 boinc_mmap_file
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek        27 Jan 21 03:54 wrapper_checkpoint.txt
[2026-01-21 03:55:03] -rw------- 1 ek ek      5002 Jan 21 03:55 pilotlog.txt
[2026-01-21 03:55:03] -rw------- 1 ek ek    502299 Jan 21 03:55 log.48298321._000323.job.log.1
[2026-01-21 03:55:03] -rw------- 1 ek ek       357 Jan 21 03:55 output.list
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek       620 Jan 21 03:55 runtime_log
[2026-01-21 03:55:03] -rw------- 1 ek ek    778240 Jan 21 03:55 result.tar.gz
[2026-01-21 03:55:03] -rw------- 1 ek ek       660 Jan 21 03:55 vuyMDmAGV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFUpKDmwGpV0m.diag
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek      9501 Jan 21 03:55 runtime_log.err
[2026-01-21 03:55:03] -rw-rw-r-- 1 ek ek     21469 Jan 21 03:55 stderr.txt
[2026-01-21 03:55:03] HITS file was successfully produced:
[2026-01-21 03:55:03] -rw------- 1 ek ek 175833073 Jan 21 03:53 shared/HITS.pool.root.1
[2026-01-21 03:55:03]  *** Contents of shared directory: ***
[2026-01-21 03:55:03] total 431436
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek 264552480 Jan 21 02:58 ATLAS.root_0
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek    597781 Jan 21 02:58 input.tar.gz
[2026-01-21 03:55:03] -rw-r--r-- 2 ek ek     15845 Jan 21 02:58 start_atlas.sh
[2026-01-21 03:55:03] -rw------- 1 ek ek 175833073 Jan 21 03:53 HITS.pool.root.1
[2026-01-21 03:55:03] -rw------- 1 ek ek    778240 Jan 21 03:55 result.tar.gz
03:55:05 (1195512): run_atlas exited; CPU time 12570.854457
03:55:05 (1195512): called boinc_finish(0)

</stderr_txt>
]]>

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