Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
05:49:05 (1346470): wrapper (7.7.26015): starting
05:49:05 (1346470): wrapper: running run_atlas (--nthreads 4)
[2026-01-21 05:49:05] Arguments: --nthreads 4
[2026-01-21 05:49:05] Threads: 4
[2026-01-21 05:49:05] Checking for CVMFS
[2026-01-21 05:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 05:49:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 05:49:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 05:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 05:49:05] 2.13.3.0 80730 1709 48444 155369 2 50 18399848 33554433 0 130560 0 394135 99.979 56486 226 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-21 05:49:05] CVMFS is ok
[2026-01-21 05:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 05:49:05] Checking for apptainer binary...
[2026-01-21 05:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 05:49:05] Running /usr/bin/apptainer --version
[2026-01-21 05:49:05] apptainer version 1.4.5
[2026-01-21 05:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 05:49:05] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-21 05:49:05] apptainer works
[2026-01-21 05:49:05] Set ATHENA_PROC_NUMBER=4
[2026-01-21 05:49:05] Set ATHENA_CORE_NUMBER=4
[2026-01-21 05:49:05] Starting ATLAS job with PandaID=6976709783
[2026-01-21 05:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 06:45:23]  *** The last 200 lines of the pilot log: ***
[2026-01-21 06:45:23]  filesize=235775
[2026-01-21 06:45:23]  filetype=log
[2026-01-21 06:45:23]  guid=ccc287d5-d38f-4c06-8f94-2efe67201721
[2026-01-21 06:45:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-21 06:45:23]  is_altstaged=None
[2026-01-21 06:45:23]  is_tar=False
[2026-01-21 06:45:23]  lfn=log.48298321._000377.job.log.tgz.1
[2026-01-21 06:45:23]  mtime=0
[2026-01-21 06:45:23]  protocol_id=None
[2026-01-21 06:45:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 06:45:23]  replicas=None
[2026-01-21 06:45:23]  scope=mc23_13p6TeV
[2026-01-21 06:45:23]  status=None
[2026-01-21 06:45:23]  status_code=0
[2026-01-21 06:45:23]  storage_token=
[2026-01-21 06:45:23]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6976709783/log.48298321._000377.job.log.tgz.1
[2026-01-21 06:45:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/55/log.48298321._000377.job.log.tgz.1
[2026-01-21 06:45:23]  workdir=None
[2026-01-21 06:45:23] ]
[2026-01-21 06:45:23] 2026-01-21 04:44:40,476 | INFO     | transferring file log.48298321._000377.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6976709783/log.48298321._000377.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-21 06:45:23] 2026-01-21 04:44:40,476 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6976709783/log.48298321._000377.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48298321._000377.job
[2026-01-21 06:45:23] 2026-01-21 04:44:40,485 | INFO     | adding to output.list: log.48298321._000377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/55/log.48298321._000377.job.log.tg
[2026-01-21 06:45:23] 2026-01-21 04:44:40,485 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 06:45:23] 2026-01-21 04:44:40,485 | INFO     | summary of transferred files:
[2026-01-21 06:45:23] 2026-01-21 04:44:40,485 | INFO     |  -- lfn=log.48298321._000377.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 06:45:23] 2026-01-21 04:44:40,485 | INFO     | stage-out finished correctly
[2026-01-21 06:45:23] 2026-01-21 04:44:40,991 | INFO     | time since job start (3327s) is within the limit (349056.0s)
[2026-01-21 06:45:23] 2026-01-21 04:44:41,226 | INFO     | monitor loop #255: job 0:6976709783 is in state 'finished'
[2026-01-21 06:45:23] 2026-01-21 04:44:41,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 06:45:23] 2026-01-21 04:44:42,792 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 06:45:23] 2026-01-21 04:44:42,996 | INFO     | time since job start (3329s) is within the limit (349056.0s)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,606 | INFO     | job 6976709783 has state=finished
[2026-01-21 06:45:23] 2026-01-21 04:44:43,607 | INFO     | preparing for final server update for job 6976709783 in state='finished'
[2026-01-21 06:45:23] 2026-01-21 04:44:43,607 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6976709783/jobReport.json
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | this job has now completed (state=finished)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | log transfer has been attempted: DONE
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | job 6976709783 has finished - writing final server update
[2026-01-21 06:45:23] 2026-01-21 04:44:43,608 | INFO     | total number of processed events: 400 (read)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976709783/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | INFO     | extracted standard info from prmon json
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 06:45:23] 2026-01-21 04:44:43,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | fitting pss+swap vs Time
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | sum of square deviations: 34277852.0
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | sum of deviations: -6338924342.5
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | mean x: 1768969107.5
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | mean y: 2511257.1041666665
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | intersect: 327133900256.1071
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | chi2: 0.08134714308282576
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | current memory leak: -184.93 B/s (using 48 data points, chi2=0.08)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | could have reported an average CPU frequency of 4035 MHz (5 samples)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | ..............................
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . Timing measurements:
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . get job = 0 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . initial setup = 3 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . payload setup = 2 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . stage-in = 0 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,611 | INFO     | . payload execution = 3310 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,612 | INFO     | . stage-out = 0 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,612 | INFO     | . log creation = 0 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,612 | INFO     | ..............................
[2026-01-21 06:45:23] 2026-01-21 04:44:43,640 | INFO     | 
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | job summary report
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | --------------------------------------------------
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | PanDA job id: 6976709783
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | task id: 48298321
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | errors: (none)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | pilot state: finished 
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | transexitcode: 0
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | exeerrorcode: 0
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | exeerrordiag: 
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | exitcode: 0
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | exitmsg: OK
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | cpuconsumptiontime: 12445 s
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | nevents: 400
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | neventsw: 0
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | pid: 1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | pgrp: 1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | corecount: 4
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | event service: False
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | sizes: {0: 2284124, 1: 2284386, 11: 2284414, 3316: 2319154, 3319: 2319154, 3320: 2319380}
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | --------------------------------------------------
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | 
[2026-01-21 06:45:23] 2026-01-21 04:44:43,641 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-21 06:45:23] 2026-01-21 04:44:43,651 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | job 6976709783 has completed (purged errors)
[2026-01-21 06:45:23] 2026-01-21 04:44:43,652 | INFO     | overall cleanup function is called
[2026-01-21 06:45:23] 2026-01-21 04:44:44,659 | INFO     | --- collectZombieJob: --- 10, [1355221]
[2026-01-21 06:45:23] 2026-01-21 04:44:44,659 | INFO     | zombie collector waiting for pid 1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:44,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 06:45:23] 2026-01-21 04:44:44,659 | INFO     | collected zombie processes
[2026-01-21 06:45:23] 2026-01-21 04:44:44,660 | INFO     | will attempt to kill all subprocesses of pid=1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:44,760 | INFO     | process IDs to be killed: [1355221] (in reverse order)
[2026-01-21 06:45:23] 2026-01-21 04:44:44,796 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 06:45:23] 2026-01-21 04:44:44,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 06:45:23] 2026-01-21 04:44:44,799 | INFO     | did not find any defunct processes belonging to 1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:44,801 | INFO     | did not find any defunct processes belonging to 1355221
[2026-01-21 06:45:23] 2026-01-21 04:44:44,801 | INFO     | ready for new job
[2026-01-21 06:45:23] 2026-01-21 04:44:44,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | **************************************
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | **************************************
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | 
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | architecture information:
[2026-01-21 06:45:23] 2026-01-21 04:44:44,802 | INFO     | executing command: cat /etc/os-release
[2026-01-21 06:45:23] 2026-01-21 04:44:44,809 | INFO     | cat /etc/os-release:
[2026-01-21 06:45:23] NAME="CentOS Linux"
[2026-01-21 06:45:23] VERSION="7 (Core)"
[2026-01-21 06:45:23] ID="centos"
[2026-01-21 06:45:23] ID_LIKE="rhel fedora"
[2026-01-21 06:45:23] VERSION_ID="7"
[2026-01-21 06:45:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 06:45:23] ANSI_COLOR="0;31"
[2026-01-21 06:45:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 06:45:23] HOME_URL="https://www.centos.org/"
[2026-01-21 06:45:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 06:45:23] 
[2026-01-21 06:45:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 06:45:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 06:45:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 06:45:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 06:45:23] 
[2026-01-21 06:45:23] 2026-01-21 04:44:44,809 | INFO     | **************************************
[2026-01-21 06:45:23] 2026-01-21 04:44:45,312 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | INFO     | sufficient remaining disk space (74875666432 B)
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | INFO     | update_server=False
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 06:45:23] 2026-01-21 04:44:45,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 06:45:23] 2026-01-21 04:44:45,320 | INFO     | aborting loop
[2026-01-21 06:45:23] 2026-01-21 04:44:45,470 | INFO     | all payload control threads have been joined
[2026-01-21 06:45:23] 2026-01-21 04:44:46,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 06:45:23] 2026-01-21 04:44:46,185 | INFO     | all data control threads have been joined
[2026-01-21 06:45:23] 2026-01-21 04:44:46,324 | INFO     | [job] retrieve thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:46,324 | INFO     | [job] queue monitor thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:46,325 | INFO     | [job] job monitor thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:46,372 | INFO     | [payload] failed_post thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:46,475 | INFO     | [payload] control thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:46,881 | INFO     | all job control threads have been joined
[2026-01-21 06:45:23] 2026-01-21 04:44:46,899 | INFO     | [job] validate thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,051 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,148 | INFO     | [data] copytool_in thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,149 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,156 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,190 | INFO     | [data] control thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,481 | INFO     | [payload] validate_post thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:47,886 | INFO     | [job] control thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:48,029 | INFO     | [data] copytool_out thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:49,325 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:44:55,947 | INFO     | job.realtimelogging is not enabled
[2026-01-21 06:45:23] 2026-01-21 04:44:56,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 06:45:23] 2026-01-21 04:45:16,160 | INFO     | PID=1350315 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-21 06:45:23] 2026-01-21 04:45:16,160 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 06:45:23] 2026-01-21 04:45:16,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 06:45:23] 2026-01-21 04:45:16,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 06:45:23] 2026-01-21 04:45:17,871 | INFO     | [monitor] cgroup control has ended
[2026-01-21 06:45:23] 2026-01-21 04:45:18,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678775617344)>', '<ExcThread(monitor, started 139678267188992)>']
[2026-01-21 06:45:23] 2026-01-21 04:45:19,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 06:45:23] 2026-01-21 04:45:19,175 | INFO     | [monitor] control thread has ended
[2026-01-21 06:45:23] 2026-01-21 04:45:23,284 | INFO     | all workflow threads have been joined
[2026-01-21 06:45:23] 2026-01-21 04:45:23,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 06:45:23] 2026-01-21 04:45:23,285 | INFO     | traces error code: 0
[2026-01-21 06:45:23] 2026-01-21 04:45:23,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 06:45:23] 2026-01-21 04:45:23,353 [wrapper] ==== pilot stdout END ====
[2026-01-21 06:45:23] 2026-01-21 04:45:23,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 06:45:23] 2026-01-21 04:45:23,356 [wrapper] pilotpid: 1350315
[2026-01-21 06:45:23] 2026-01-21 04:45:23,357 [wrapper] Pilot exit status: 0
[2026-01-21 06:45:23] 2026-01-21 04:45:23,363 [wrapper] pandaids: 6976709783
[2026-01-21 06:45:23] 2026-01-21 04:45:23,385 [wrapper] cleanup supervisor_pilot 1389398 1350316
[2026-01-21 06:45:23] 2026-01-21 04:45:23,386 [wrapper] Test setup, not cleaning
[2026-01-21 06:45:23] 2026-01-21 04:45:23,388 [wrapper] apfmon messages muted
[2026-01-21 06:45:23] 2026-01-21 04:45:23,389 [wrapper] ==== wrapper stdout END ====
[2026-01-21 06:45:23] 2026-01-21 04:45:23,390 [wrapper] ==== wrapper stderr END ====
[2026-01-21 06:45:23]  *** Error codes and diagnostics ***
[2026-01-21 06:45:23]     "exeErrorCode": 0,
[2026-01-21 06:45:23]     "exeErrorDiag": "",
[2026-01-21 06:45:23]     "pilotErrorCode": 0,
[2026-01-21 06:45:23]     "pilotErrorDiag": "",
[2026-01-21 06:45:23]  *** Listing of results directory ***
[2026-01-21 06:45:23] total 430136
[2026-01-21 06:45:23] -rw-r--r-- 1 ek ek    584422 Jan 20 20:02 pilot3.tar.gz
[2026-01-21 06:45:23] -rwx------ 1 ek ek     36322 Jan 20 20:03 runpilot2-wrapper.sh
[2026-01-21 06:45:23] -rw-r--r-- 1 ek ek      5111 Jan 20 20:03 queuedata.json
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek       100 Jan 21 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 06:45:23] -rwxr-xr-x 1 ek ek      7986 Jan 21 05:49 run_atlas
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek       105 Jan 21 05:49 job.xml
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek 262170439 Jan 21 05:49 EVNT.48298318._000020.pool.root.1
[2026-01-21 06:45:23] drwxrwx--x 2 ek ek      4096 Jan 21 05:49 shared
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek    597778 Jan 21 05:49 input.tar.gz
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek     15845 Jan 21 05:49 start_atlas.sh
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek         0 Jan 21 05:49 boinc_setup_complete
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek      9841 Jan 21 05:49 init_data.xml
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek         0 Jan 21 05:49 boinc_lockfile
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek      2632 Jan 21 05:49 pandaJob.out
[2026-01-21 06:45:23] -rw------- 1 ek ek        50 Jan 21 05:49 setup.sh.local
[2026-01-21 06:45:23] -rw------- 1 ek ek   1002345 Jan 21 05:49 agis_schedconf.cvmfs.json
[2026-01-21 06:45:23] -rw------- 1 ek ek   1516246 Jan 21 05:49 agis_ddmendpoints.agis.ALL.json
[2026-01-21 06:45:23] -rw------- 1 ek ek       432 Jan 21 05:49 workernode_map.json
[2026-01-21 06:45:23] drwx------ 5 ek ek      4096 Jan 21 05:49 pilot3
[2026-01-21 06:45:23] -rw------- 1 ek ek 172863607 Jan 21 06:44 HITS.48298321._000377.pool.root.1
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek       529 Jan 21 06:44 boinc_task_state.xml
[2026-01-21 06:45:23] -rw------- 1 ek ek        95 Jan 21 06:44 pilot_heartbeat.json
[2026-01-21 06:45:23] -rw------- 1 ek ek      1054 Jan 21 06:44 memory_monitor_summary.json
[2026-01-21 06:45:23] -rw------- 1 ek ek    235775 Jan 21 06:44 log.48298321._000377.job.log.tgz.1
[2026-01-21 06:45:23] -rw------- 1 ek ek      6374 Jan 21 06:44 heartbeat.json
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek      8192 Jan 21 06:45 boinc_mmap_file
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek        27 Jan 21 06:45 wrapper_checkpoint.txt
[2026-01-21 06:45:23] -rw------- 1 ek ek      4816 Jan 21 06:45 pilotlog.txt
[2026-01-21 06:45:23] -rw------- 1 ek ek    502987 Jan 21 06:45 log.48298321._000377.job.log.1
[2026-01-21 06:45:23] -rw------- 1 ek ek       357 Jan 21 06:45 output.list
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek       620 Jan 21 06:45 runtime_log
[2026-01-21 06:45:23] -rw------- 1 ek ek    757760 Jan 21 06:45 result.tar.gz
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek      9501 Jan 21 06:45 runtime_log.err
[2026-01-21 06:45:23] -rw------- 1 ek ek       668 Jan 21 06:45 rBrNDmAGV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhUpKDmNfvdrn.diag
[2026-01-21 06:45:23] -rw-rw-r-- 1 ek ek     21030 Jan 21 06:45 stderr.txt
[2026-01-21 06:45:23] HITS file was successfully produced:
[2026-01-21 06:45:23] -rw------- 1 ek ek 172863607 Jan 21 06:44 shared/HITS.pool.root.1
[2026-01-21 06:45:23]  *** Contents of shared directory: ***
[2026-01-21 06:45:23] total 426192
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek 262170439 Jan 21 05:49 ATLAS.root_0
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek    597778 Jan 21 05:49 input.tar.gz
[2026-01-21 06:45:23] -rw-r--r-- 2 ek ek     15845 Jan 21 05:49 start_atlas.sh
[2026-01-21 06:45:23] -rw------- 1 ek ek 172863607 Jan 21 06:44 HITS.pool.root.1
[2026-01-21 06:45:23] -rw------- 1 ek ek    757760 Jan 21 06:45 result.tar.gz
06:45:24 (1346470): run_atlas exited; CPU time 12472.839065
06:45:24 (1346470): called boinc_finish(0)

</stderr_txt>
]]>

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