Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:30:12 (843336): wrapper (7.7.26015): starting
20:30:12 (843336): wrapper: running run_atlas (--nthreads 4)
[2026-01-20 20:30:12] Arguments: --nthreads 4
[2026-01-20 20:30:12] Threads: 4
[2026-01-20 20:30:12] Checking for CVMFS
[2026-01-20 20:30:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 20:30:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 20:30:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 20:30:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 20:30:12] 2.13.3.0 80730 1150 14124 155356 2 1 18263439 33554433 0 130560 0 0 0.000 36243 223 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-20 20:30:12] CVMFS is ok
[2026-01-20 20:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 20:30:12] Checking for apptainer binary...
[2026-01-20 20:30:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-20 20:30:12] Running /usr/bin/apptainer --version
[2026-01-20 20:30:12] apptainer version 1.4.5
[2026-01-20 20:30:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 20:30:13] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-20 20:30:13] apptainer works
[2026-01-20 20:30:13] Set ATHENA_PROC_NUMBER=4
[2026-01-20 20:30:13] Set ATHENA_CORE_NUMBER=4
[2026-01-20 20:30:13] Starting ATLAS job with PandaID=6976712471
[2026-01-20 20:30:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-20 21:26:47]  *** The last 200 lines of the pilot log: ***
[2026-01-20 21:26:47]  ddmendpoint=NDGF-T1_DATADISK
[2026-01-20 21:26:47]  ddmendpoint_alt=None
[2026-01-20 21:26:47]  direct_access_lan=False
[2026-01-20 21:26:47]  direct_access_wan=False
[2026-01-20 21:26:47]  domain=
[2026-01-20 21:26:47]  filesize=234124
[2026-01-20 21:26:47]  filetype=log
[2026-01-20 21:26:47]  guid=79fc4dce-c8aa-4906-9828-699ef2e92239
[2026-01-20 21:26:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-20 21:26:47]  is_altstaged=None
[2026-01-20 21:26:47]  is_tar=False
[2026-01-20 21:26:47]  lfn=log.48299581._000127.job.log.tgz.1
[2026-01-20 21:26:47]  mtime=0
[2026-01-20 21:26:47]  protocol_id=None
[2026-01-20 21:26:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-20 21:26:47]  replicas=None
[2026-01-20 21:26:47]  scope=mc23_13p6TeV
[2026-01-20 21:26:47]  status=None
[2026-01-20 21:26:47]  status_code=0
[2026-01-20 21:26:47]  storage_token=
[2026-01-20 21:26:47]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6976712471/log.48299581._000127.job.log.tgz.1
[2026-01-20 21:26:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/8a/log.48299581._000127.job.log.tgz.1
[2026-01-20 21:26:47]  workdir=None
[2026-01-20 21:26:47] ]
[2026-01-20 21:26:47] 2026-01-20 19:26:09,927 | INFO     | transferring file log.48299581._000127.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6976712471/log.48299581._000127.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-20 21:26:47] 2026-01-20 19:26:09,927 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6976712471/log.48299581._000127.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48299581._000127.job
[2026-01-20 21:26:47] 2026-01-20 19:26:09,935 | INFO     | adding to output.list: log.48299581._000127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/8a/log.48299581._000127.job.log.tg
[2026-01-20 21:26:47] 2026-01-20 19:26:09,936 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-20 21:26:47] 2026-01-20 19:26:09,936 | INFO     | summary of transferred files:
[2026-01-20 21:26:47] 2026-01-20 19:26:09,936 | INFO     |  -- lfn=log.48299581._000127.job.log.tgz.1, status_code=0, status=transferred
[2026-01-20 21:26:47] 2026-01-20 19:26:09,936 | INFO     | stage-out finished correctly
[2026-01-20 21:26:47] 2026-01-20 19:26:10,965 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-20 21:26:47] 2026-01-20 19:26:11,277 | INFO     | job 6976712471 has state=finished
[2026-01-20 21:26:47] 2026-01-20 19:26:11,277 | INFO     | preparing for final server update for job 6976712471 in state='finished'
[2026-01-20 21:26:47] 2026-01-20 19:26:11,277 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6976712471/jobReport.json
[2026-01-20 21:26:47] 2026-01-20 19:26:11,278 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-20 21:26:47] 2026-01-20 19:26:11,278 | INFO     | this job has now completed (state=finished)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,279 | INFO     | log transfer has been attempted: DONE
[2026-01-20 21:26:47] 2026-01-20 19:26:11,279 | INFO     | job 6976712471 has finished - writing final server update
[2026-01-20 21:26:47] 2026-01-20 19:26:11,279 | INFO     | total number of processed events: 400 (read)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,280 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976712471/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | extracted standard info from prmon json
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | extracted standard memory fields from prmon json
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | fitting pss+swap vs Time
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | sum of square deviations: 34277852.0
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | sum of deviations: -6885034619.999998
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | mean x: 1768935592.5
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | mean y: 2632222.4166666665
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | intersect: 355310275038.3291
[2026-01-20 21:26:47] 2026-01-20 19:26:11,281 | INFO     | chi2: 0.0856969304241775
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | current memory leak: -200.86 B/s (using 48 data points, chi2=0.09)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | could have reported an average CPU frequency of 3877 MHz (5 samples)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | ..............................
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . Timing measurements:
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . get job = 0 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . initial setup = 6 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . payload setup = 3 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . stage-in = 0 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . payload execution = 3315 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . stage-out = 0 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | . log creation = 0 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,282 | INFO     | ..............................
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | 
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | job summary report
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | --------------------------------------------------
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | PanDA job id: 6976712471
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | task id: 48299581
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | errors: (none)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | pilot state: finished 
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | transexitcode: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | exeerrorcode: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | exeerrordiag: 
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | exitcode: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | exitmsg: OK
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | cpuconsumptiontime: 12529 s
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | nevents: 400
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | neventsw: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | pid: 852310
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | pgrp: 852310
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | corecount: 4
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | event service: False
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | sizes: {0: 2284384, 11: 2284384, 3322: 2319150, 3323: 2319376}
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | --------------------------------------------------
[2026-01-20 21:26:47] 2026-01-20 19:26:11,309 | INFO     | 
[2026-01-20 21:26:47] 2026-01-20 19:26:11,310 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-20 21:26:47] 2026-01-20 19:26:11,317 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | job 6976712471 has completed (purged errors)
[2026-01-20 21:26:47] 2026-01-20 19:26:11,318 | INFO     | overall cleanup function is called
[2026-01-20 21:26:47] 2026-01-20 19:26:12,323 | INFO     | --- collectZombieJob: --- 10, [852310]
[2026-01-20 21:26:47] 2026-01-20 19:26:12,323 | INFO     | zombie collector waiting for pid 852310
[2026-01-20 21:26:47] 2026-01-20 19:26:12,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-20 21:26:47] 2026-01-20 19:26:12,323 | INFO     | collected zombie processes
[2026-01-20 21:26:47] 2026-01-20 19:26:12,323 | INFO     | will attempt to kill all subprocesses of pid=852310
[2026-01-20 21:26:47] 2026-01-20 19:26:12,410 | INFO     | process IDs to be killed: [852310] (in reverse order)
[2026-01-20 21:26:47] 2026-01-20 19:26:12,439 | WARNING  | found no corresponding commands to process id(s)
[2026-01-20 21:26:47] 2026-01-20 19:26:12,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-20 21:26:47] 2026-01-20 19:26:12,442 | INFO     | did not find any defunct processes belonging to 852310
[2026-01-20 21:26:47] 2026-01-20 19:26:12,444 | INFO     | did not find any defunct processes belonging to 852310
[2026-01-20 21:26:47] 2026-01-20 19:26:12,444 | INFO     | ready for new job
[2026-01-20 21:26:47] 2026-01-20 19:26:12,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | **************************************
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | **************************************
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | 
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | architecture information:
[2026-01-20 21:26:47] 2026-01-20 19:26:12,445 | INFO     | executing command: cat /etc/os-release
[2026-01-20 21:26:47] 2026-01-20 19:26:12,451 | INFO     | cat /etc/os-release:
[2026-01-20 21:26:47] NAME="CentOS Linux"
[2026-01-20 21:26:47] VERSION="7 (Core)"
[2026-01-20 21:26:47] ID="centos"
[2026-01-20 21:26:47] ID_LIKE="rhel fedora"
[2026-01-20 21:26:47] VERSION_ID="7"
[2026-01-20 21:26:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-20 21:26:47] ANSI_COLOR="0;31"
[2026-01-20 21:26:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-20 21:26:47] HOME_URL="https://www.centos.org/"
[2026-01-20 21:26:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-20 21:26:47] 
[2026-01-20 21:26:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-20 21:26:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-20 21:26:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-20 21:26:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-20 21:26:47] 
[2026-01-20 21:26:47] 2026-01-20 19:26:12,451 | INFO     | **************************************
[2026-01-20 21:26:47] 2026-01-20 19:26:12,953 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | INFO     | sufficient remaining disk space (73855401984 B)
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | INFO     | current server update state: UPDATING_FINAL
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | INFO     | update_server=False
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-20 21:26:47] 2026-01-20 19:26:12,959 | INFO     | aborting loop
[2026-01-20 21:26:47] 2026-01-20 19:26:12,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-20 21:26:47] 2026-01-20 19:26:13,327 | INFO     | all payload control threads have been joined
[2026-01-20 21:26:47] 2026-01-20 19:26:13,719 | INFO     | all job control threads have been joined
[2026-01-20 21:26:47] 2026-01-20 19:26:13,929 | INFO     | all data control threads have been joined
[2026-01-20 21:26:47] 2026-01-20 19:26:13,964 | INFO     | [job] retrieve thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:13,964 | INFO     | [job] queue monitor thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:13,965 | INFO     | [job] job monitor thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:14,332 | INFO     | [payload] control thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:14,724 | INFO     | [job] control thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:14,805 | INFO     | [payload] failed_post thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:14,934 | INFO     | [data] control thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:14,973 | INFO     | [data] copytool_out thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,061 | INFO     | [job] validate thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,173 | INFO     | [payload] execute_payloads thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,184 | INFO     | [job] create_data_payload thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,220 | INFO     | [payload] validate_pre thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,300 | INFO     | [data] copytool_in thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:15,504 | INFO     | [payload] validate_post thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:16,961 | INFO     | [data] queue_monitor thread has finished
[2026-01-20 21:26:47] 2026-01-20 19:26:41,848 | INFO     | [monitor] cgroup control has ended
[2026-01-20 21:26:47] 2026-01-20 19:26:42,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790488504128)>', '<ExcThread(monitor, started 139789575649024)>']
[2026-01-20 21:26:47] 2026-01-20 19:26:42,552 | INFO     | PID=847447 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-20 21:26:47] 2026-01-20 19:26:42,552 | INFO     | found 0 job(s) in 20 queues
[2026-01-20 21:26:47] 2026-01-20 19:26:42,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-20 21:26:47] 2026-01-20 19:26:42,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-20 21:26:47] 2026-01-20 19:26:42,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-20 21:26:47] 2026-01-20 19:26:42,553 | INFO     | [monitor] control thread has ended
[2026-01-20 21:26:47] 2026-01-20 19:26:47,304 | INFO     | all workflow threads have been joined
[2026-01-20 21:26:47] 2026-01-20 19:26:47,304 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-20 21:26:47] 2026-01-20 19:26:47,304 | INFO     | traces error code: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:47,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-20 21:26:47] 2026-01-20 19:26:47,344 [wrapper] ==== pilot stdout END ====
[2026-01-20 21:26:47] 2026-01-20 19:26:47,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-20 21:26:47] 2026-01-20 19:26:47,347 [wrapper] pilotpid: 847447
[2026-01-20 21:26:47] 2026-01-20 19:26:47,348 [wrapper] Pilot exit status: 0
[2026-01-20 21:26:47] 2026-01-20 19:26:47,354 [wrapper] pandaids: 6976712471
[2026-01-20 21:26:47] 2026-01-20 19:26:47,377 [wrapper] cleanup supervisor_pilot  886144 847448
[2026-01-20 21:26:47] 2026-01-20 19:26:47,379 [wrapper] Test setup, not cleaning
[2026-01-20 21:26:47] 2026-01-20 19:26:47,380 [wrapper] apfmon messages muted
[2026-01-20 21:26:47] 2026-01-20 19:26:47,382 [wrapper] ==== wrapper stdout END ====
[2026-01-20 21:26:47] 2026-01-20 19:26:47,383 [wrapper] ==== wrapper stderr END ====
[2026-01-20 21:26:47]  *** Error codes and diagnostics ***
[2026-01-20 21:26:47]     "exeErrorCode": 0,
[2026-01-20 21:26:47]     "exeErrorDiag": "",
[2026-01-20 21:26:47]     "pilotErrorCode": 0,
[2026-01-20 21:26:47]     "pilotErrorDiag": "",
[2026-01-20 21:26:47]  *** Listing of results directory ***
[2026-01-20 21:26:47] total 427352
[2026-01-20 21:26:47] -rw-r--r-- 1 ek ek      5111 Jan 20 20:02 queuedata.json
[2026-01-20 21:26:47] -rw-r--r-- 1 ek ek    584422 Jan 20 20:02 pilot3.tar.gz
[2026-01-20 21:26:47] -rwx------ 1 ek ek     36322 Jan 20 20:03 runpilot2-wrapper.sh
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek       100 Jan 20 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-20 21:26:47] -rwxr-xr-x 1 ek ek      7986 Jan 20 20:30 run_atlas
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek       105 Jan 20 20:30 job.xml
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek 259605984 Jan 20 20:30 EVNT.48299579._000010.pool.root.1
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek    597779 Jan 20 20:30 input.tar.gz
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek     15845 Jan 20 20:30 start_atlas.sh
[2026-01-20 21:26:47] drwxrwx--x 2 ek ek      4096 Jan 20 20:30 shared
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek         0 Jan 20 20:30 boinc_setup_complete
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek      9841 Jan 20 20:30 init_data.xml
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek         0 Jan 20 20:30 boinc_lockfile
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek      2631 Jan 20 20:30 pandaJob.out
[2026-01-20 21:26:47] -rw------- 1 ek ek        50 Jan 20 20:30 setup.sh.local
[2026-01-20 21:26:47] -rw------- 1 ek ek   1003869 Jan 20 20:30 agis_schedconf.cvmfs.json
[2026-01-20 21:26:47] -rw------- 1 ek ek   1516246 Jan 20 20:30 agis_ddmendpoints.agis.ALL.json
[2026-01-20 21:26:47] -rw------- 1 ek ek       433 Jan 20 20:30 workernode_map.json
[2026-01-20 21:26:47] drwx------ 5 ek ek      4096 Jan 20 20:30 pilot3
[2026-01-20 21:26:47] -rw------- 1 ek ek 172573769 Jan 20 21:25 HITS.48299581._000127.pool.root.1
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek       529 Jan 20 21:25 boinc_task_state.xml
[2026-01-20 21:26:47] -rw------- 1 ek ek        95 Jan 20 21:25 pilot_heartbeat.json
[2026-01-20 21:26:47] -rw------- 1 ek ek      1040 Jan 20 21:26 memory_monitor_summary.json
[2026-01-20 21:26:47] -rw------- 1 ek ek    234124 Jan 20 21:26 log.48299581._000127.job.log.tgz.1
[2026-01-20 21:26:47] -rw------- 1 ek ek      6344 Jan 20 21:26 heartbeat.json
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek      8192 Jan 20 21:26 boinc_mmap_file
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek        27 Jan 20 21:26 wrapper_checkpoint.txt
[2026-01-20 21:26:47] -rw------- 1 ek ek      4743 Jan 20 21:26 pilotlog.txt
[2026-01-20 21:26:47] -rw------- 1 ek ek    503621 Jan 20 21:26 log.48299581._000127.job.log.1
[2026-01-20 21:26:47] -rw------- 1 ek ek       357 Jan 20 21:26 output.list
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek       620 Jan 20 21:26 runtime_log
[2026-01-20 21:26:47] -rw------- 1 ek ek    757760 Jan 20 21:26 result.tar.gz
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek      9501 Jan 20 21:26 runtime_log.err
[2026-01-20 21:26:47] -rw------- 1 ek ek       665 Jan 20 21:26 9XxLDmQFV28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyTpKDmqRyhmn.diag
[2026-01-20 21:26:47] -rw-rw-r-- 1 ek ek     20618 Jan 20 21:26 stderr.txt
[2026-01-20 21:26:47] HITS file was successfully produced:
[2026-01-20 21:26:47] -rw------- 1 ek ek 172573769 Jan 20 21:25 shared/HITS.pool.root.1
[2026-01-20 21:26:47]  *** Contents of shared directory: ***
[2026-01-20 21:26:47] total 423404
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek 259605984 Jan 20 20:30 ATLAS.root_0
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek    597779 Jan 20 20:30 input.tar.gz
[2026-01-20 21:26:47] -rw-r--r-- 2 ek ek     15845 Jan 20 20:30 start_atlas.sh
[2026-01-20 21:26:47] -rw------- 1 ek ek 172573769 Jan 20 21:25 HITS.pool.root.1
[2026-01-20 21:26:47] -rw------- 1 ek ek    757760 Jan 20 21:26 result.tar.gz
21:26:49 (843336): run_atlas exited; CPU time 12560.395526
21:26:49 (843336): called boinc_finish(0)

</stderr_txt>
]]>

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