Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
06:45:28 (1396552): wrapper (7.7.26015): starting
06:45:28 (1396552): wrapper: running run_atlas (--nthreads 4)
[2026-01-21 06:45:28] Arguments: --nthreads 4
[2026-01-21 06:45:28] Threads: 4
[2026-01-21 06:45:28] Checking for CVMFS
[2026-01-21 06:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-21 06:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-21 06:45:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-21 06:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-21 06:45:28] 2.13.3.0 80730 1766 38136 155371 1 50 18461229 33554433 0 130560 0 433548 99.980 60248 231 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-21 06:45:28] CVMFS is ok
[2026-01-21 06:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-21 06:45:28] Checking for apptainer binary...
[2026-01-21 06:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-21 06:45:28] Running /usr/bin/apptainer --version
[2026-01-21 06:45:28] apptainer version 1.4.5
[2026-01-21 06:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-21 06:45:28] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-21 06:45:28] apptainer works
[2026-01-21 06:45:28] Set ATHENA_PROC_NUMBER=4
[2026-01-21 06:45:28] Set ATHENA_CORE_NUMBER=4
[2026-01-21 06:45:28] Starting ATLAS job with PandaID=6976635408
[2026-01-21 06:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 07:39:50]  *** The last 200 lines of the pilot log: ***
[2026-01-21 07:39:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-21 07:39:50]  is_altstaged=None
[2026-01-21 07:39:50]  is_tar=False
[2026-01-21 07:39:50]  lfn=log.48299581._000011.job.log.tgz.1
[2026-01-21 07:39:50]  mtime=0
[2026-01-21 07:39:50]  protocol_id=None
[2026-01-21 07:39:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-21 07:39:50]  replicas=None
[2026-01-21 07:39:50]  scope=mc23_13p6TeV
[2026-01-21 07:39:50]  status=None
[2026-01-21 07:39:50]  status_code=0
[2026-01-21 07:39:50]  storage_token=
[2026-01-21 07:39:50]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/log.48299581._000011.job.log.tgz.1
[2026-01-21 07:39:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/7d/log.48299581._000011.job.log.tgz.1
[2026-01-21 07:39:50]  workdir=None
[2026-01-21 07:39:50] ]
[2026-01-21 07:39:50] 2026-01-21 05:39:31,841 | INFO     | transferring file log.48299581._000011.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/log.48299581._000011.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-21 07:39:50] 2026-01-21 05:39:31,841 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/log.48299581._000011.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48299581._000011.job
[2026-01-21 07:39:50] 2026-01-21 05:39:31,850 | INFO     | adding to output.list: log.48299581._000011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/7d/log.48299581._000011.job.log.tg
[2026-01-21 07:39:50] 2026-01-21 05:39:31,851 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-21 07:39:50] 2026-01-21 05:39:31,851 | INFO     | summary of transferred files:
[2026-01-21 07:39:50] 2026-01-21 05:39:31,851 | INFO     |  -- lfn=log.48299581._000011.job.log.tgz.1, status_code=0, status=transferred
[2026-01-21 07:39:50] 2026-01-21 05:39:31,851 | INFO     | stage-out finished correctly
[2026-01-21 07:39:50] 2026-01-21 05:39:31,948 | WARNING  | process 1405212 can no longer be monitored (due to stat problems) - aborting
[2026-01-21 07:39:50] 2026-01-21 05:39:31,948 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 07:39:50] 2026-01-21 05:39:32,042 | INFO     | number of running child processes to parent process 1405212: 1
[2026-01-21 07:39:50] 2026-01-21 05:39:32,042 | INFO     | maximum number of monitored processes: 6
[2026-01-21 07:39:50] 2026-01-21 05:39:32,715 | INFO     | time since job start (3233s) is within the limit (349056.0s)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,544 | INFO     | monitor loop #249: job 0:6976635408 is in state 'finished'
[2026-01-21 07:39:50] 2026-01-21 05:39:34,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,720 | INFO     | time since job start (3235s) is within the limit (349056.0s)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,736 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-21 07:39:50] 2026-01-21 05:39:34,763 | INFO     | job 6976635408 has state=finished
[2026-01-21 07:39:50] 2026-01-21 05:39:34,764 | INFO     | preparing for final server update for job 6976635408 in state='finished'
[2026-01-21 07:39:50] 2026-01-21 05:39:34,764 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/jobReport.json
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | this job has now completed (state=finished)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | log transfer has been attempted: DONE
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | job 6976635408 has finished - writing final server update
[2026-01-21 07:39:50] 2026-01-21 05:39:34,765 | INFO     | total number of processed events: 400 (read)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6976635408/memory_monitor_summary.json (trf name=prmon)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | INFO     | extracted standard info from prmon json
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | INFO     | extracted standard memory fields from prmon json
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-21 07:39:50] 2026-01-21 05:39:34,767 | INFO     | fitting pss+swap vs Time
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | sum of square deviations: 30168007.5
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | sum of deviations: -6184783991.500001
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | mean x: 1768972433.5
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | mean y: 2516230.152173913
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | intersect: 362661945697.46454
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | chi2: 0.10219106516948007
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | current memory leak: -205.01 B/s (using 46 data points, chi2=0.10)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | could have reported an average CPU frequency of 4196 MHz (5 samples)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | ..............................
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . Timing measurements:
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . get job = 0 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . initial setup = 4 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . payload setup = 3 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . stage-in = 0 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . payload execution = 3214 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . stage-out = 0 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | . log creation = 0 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,768 | INFO     | ..............................
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | 
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | job summary report
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | --------------------------------------------------
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | PanDA job id: 6976635408
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | task id: 48299581
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | errors: (none)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | pilot state: finished 
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | transexitcode: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | exeerrorcode: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:34,794 | INFO     | exeerrordiag: 
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | exitcode: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | exitmsg: OK
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | cpuconsumptiontime: 12215 s
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | nevents: 400
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | neventsw: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | pid: 1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | pgrp: 1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | corecount: 4
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | event service: False
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | sizes: {0: 2284379, 11: 2284379, 3220: 2310022, 3221: 2319020, 3224: 2319302}
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | --------------------------------------------------
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | 
[2026-01-21 07:39:50] 2026-01-21 05:39:34,795 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,803 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 07:39:50] 2026-01-21 05:39:34,804 | INFO     | job 6976635408 has completed (purged errors)
[2026-01-21 07:39:50] 2026-01-21 05:39:34,804 | INFO     | overall cleanup function is called
[2026-01-21 07:39:50] 2026-01-21 05:39:35,805 | INFO     | --- collectZombieJob: --- 10, [1405212]
[2026-01-21 07:39:50] 2026-01-21 05:39:35,806 | INFO     | zombie collector waiting for pid 1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:35,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 07:39:50] 2026-01-21 05:39:35,806 | INFO     | collected zombie processes
[2026-01-21 07:39:50] 2026-01-21 05:39:35,806 | INFO     | will attempt to kill all subprocesses of pid=1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:35,893 | INFO     | process IDs to be killed: [1405212] (in reverse order)
[2026-01-21 07:39:50] 2026-01-21 05:39:35,923 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 07:39:50] 2026-01-21 05:39:35,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 07:39:50] 2026-01-21 05:39:35,926 | INFO     | did not find any defunct processes belonging to 1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:35,928 | INFO     | did not find any defunct processes belonging to 1405212
[2026-01-21 07:39:50] 2026-01-21 05:39:35,929 | INFO     | ready for new job
[2026-01-21 07:39:50] 2026-01-21 05:39:35,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 07:39:50] 2026-01-21 05:39:35,929 | INFO     | **************************************
[2026-01-21 07:39:50] 2026-01-21 05:39:35,929 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 07:39:50] 2026-01-21 05:39:35,930 | INFO     | **************************************
[2026-01-21 07:39:50] 2026-01-21 05:39:35,930 | INFO     | 
[2026-01-21 07:39:50] 2026-01-21 05:39:35,930 | INFO     | architecture information:
[2026-01-21 07:39:50] 2026-01-21 05:39:35,930 | INFO     | executing command: cat /etc/os-release
[2026-01-21 07:39:50] 2026-01-21 05:39:35,936 | INFO     | cat /etc/os-release:
[2026-01-21 07:39:50] NAME="CentOS Linux"
[2026-01-21 07:39:50] VERSION="7 (Core)"
[2026-01-21 07:39:50] ID="centos"
[2026-01-21 07:39:50] ID_LIKE="rhel fedora"
[2026-01-21 07:39:50] VERSION_ID="7"
[2026-01-21 07:39:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 07:39:50] ANSI_COLOR="0;31"
[2026-01-21 07:39:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 07:39:50] HOME_URL="https://www.centos.org/"
[2026-01-21 07:39:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 07:39:50] 
[2026-01-21 07:39:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 07:39:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 07:39:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 07:39:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 07:39:50] 
[2026-01-21 07:39:50] 2026-01-21 05:39:35,937 | INFO     | **************************************
[2026-01-21 07:39:50] 2026-01-21 05:39:36,439 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | INFO     | sufficient remaining disk space (73123495936 B)
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | INFO     | update_server=False
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 07:39:50] 2026-01-21 05:39:36,446 | INFO     | aborting loop
[2026-01-21 07:39:50] 2026-01-21 05:39:36,447 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-21 07:39:50] 2026-01-21 05:39:36,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 07:39:50] 2026-01-21 05:39:36,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 07:39:50] 2026-01-21 05:39:36,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 07:39:50] 2026-01-21 05:39:36,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 07:39:50] 2026-01-21 05:39:36,837 | INFO     | all payload control threads have been joined
[2026-01-21 07:39:50] 2026-01-21 05:39:37,340 | INFO     | all data control threads have been joined
[2026-01-21 07:39:50] 2026-01-21 05:39:37,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 07:39:50] 2026-01-21 05:39:37,447 | INFO     | [job] retrieve thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:37,451 | INFO     | [job] queue monitor thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:37,452 | INFO     | [job] job monitor thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:37,459 | INFO     | [data] copytool_in thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:37,623 | INFO     | all job control threads have been joined
[2026-01-21 07:39:50] 2026-01-21 05:39:37,843 | INFO     | [payload] control thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,230 | INFO     | [payload] failed_post thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,314 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,342 | INFO     | [data] control thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,628 | INFO     | [job] control thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,643 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,706 | INFO     | [job] validate thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,797 | INFO     | [payload] validate_post thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,823 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:38,894 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:39,395 | INFO     | [data] copytool_out thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:40,451 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 07:39:50] 2026-01-21 05:39:44,114 | INFO     | [monitor] cgroup control has ended
[2026-01-21 07:39:50] 2026-01-21 05:39:45,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115946276672)>', '<ExcThread(monitor, started 140115313682176)>']
[2026-01-21 07:39:50] 2026-01-21 05:39:45,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 07:39:50] 2026-01-21 05:39:45,492 | INFO     | [monitor] control thread has ended
[2026-01-21 07:39:50] 2026-01-21 05:39:50,054 | INFO     | all workflow threads have been joined
[2026-01-21 07:39:50] 2026-01-21 05:39:50,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 07:39:50] 2026-01-21 05:39:50,054 | INFO     | traces error code: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:50,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 07:39:50] 2026-01-21 05:39:50,112 [wrapper] ==== pilot stdout END ====
[2026-01-21 07:39:50] 2026-01-21 05:39:50,114 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 07:39:50] 2026-01-21 05:39:50,116 [wrapper] pilotpid: 1400411
[2026-01-21 07:39:50] 2026-01-21 05:39:50,117 [wrapper] Pilot exit status: 0
[2026-01-21 07:39:50] 2026-01-21 05:39:50,123 [wrapper] pandaids: 6976635408
[2026-01-21 07:39:50] 2026-01-21 05:39:50,145 [wrapper] cleanup supervisor_pilot 1439458 1400412
[2026-01-21 07:39:50] 2026-01-21 05:39:50,146 [wrapper] Test setup, not cleaning
[2026-01-21 07:39:50] 2026-01-21 05:39:50,148 [wrapper] apfmon messages muted
[2026-01-21 07:39:50] 2026-01-21 05:39:50,149 [wrapper] ==== wrapper stdout END ====
[2026-01-21 07:39:50] 2026-01-21 05:39:50,150 [wrapper] ==== wrapper stderr END ====
[2026-01-21 07:39:50]  *** Error codes and diagnostics ***
[2026-01-21 07:39:50]     "exeErrorCode": 0,
[2026-01-21 07:39:50]     "exeErrorDiag": "",
[2026-01-21 07:39:50]     "pilotErrorCode": 0,
[2026-01-21 07:39:50]     "pilotErrorDiag": "",
[2026-01-21 07:39:50]  *** Listing of results directory ***
[2026-01-21 07:39:50] total 424628
[2026-01-21 07:39:50] -rw-r--r-- 1 ek ek    584422 Jan 20 18:46 pilot3.tar.gz
[2026-01-21 07:39:50] -rw-r--r-- 1 ek ek      5111 Jan 20 19:05 queuedata.json
[2026-01-21 07:39:50] -rwx------ 1 ek ek     36322 Jan 20 19:05 runpilot2-wrapper.sh
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek       100 Jan 21 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 07:39:50] -rwxr-xr-x 1 ek ek      7986 Jan 21 06:45 run_atlas
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek       105 Jan 21 06:45 job.xml
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek 258121212 Jan 21 06:45 EVNT.48299579._000007.pool.root.1
[2026-01-21 07:39:50] drwxrwx--x 2 ek ek      4096 Jan 21 06:45 shared
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek    597777 Jan 21 06:45 input.tar.gz
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek     15845 Jan 21 06:45 start_atlas.sh
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek         0 Jan 21 06:45 boinc_setup_complete
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek      9841 Jan 21 06:45 init_data.xml
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek         0 Jan 21 06:45 boinc_lockfile
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek      2628 Jan 21 06:45 pandaJob.out
[2026-01-21 07:39:50] -rw------- 1 ek ek        50 Jan 21 06:45 setup.sh.local
[2026-01-21 07:39:50] -rw------- 1 ek ek   1002651 Jan 21 06:45 agis_schedconf.cvmfs.json
[2026-01-21 07:39:50] -rw------- 1 ek ek   1516246 Jan 21 06:45 agis_ddmendpoints.agis.ALL.json
[2026-01-21 07:39:50] -rw------- 1 ek ek       432 Jan 21 06:45 workernode_map.json
[2026-01-21 07:39:50] drwx------ 5 ek ek      4096 Jan 21 06:45 pilot3
[2026-01-21 07:39:50] -rw------- 1 ek ek        95 Jan 21 07:39 pilot_heartbeat.json
[2026-01-21 07:39:50] -rw------- 1 ek ek 171280346 Jan 21 07:39 HITS.48299581._000011.pool.root.1
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek       529 Jan 21 07:39 boinc_task_state.xml
[2026-01-21 07:39:50] -rw------- 1 ek ek      1050 Jan 21 07:39 memory_monitor_summary.json
[2026-01-21 07:39:50] -rw------- 1 ek ek    245256 Jan 21 07:39 log.48299581._000011.job.log.tgz.1
[2026-01-21 07:39:50] -rw------- 1 ek ek      6362 Jan 21 07:39 heartbeat.json
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek      8192 Jan 21 07:39 boinc_mmap_file
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek        27 Jan 21 07:39 wrapper_checkpoint.txt
[2026-01-21 07:39:50] -rw------- 1 ek ek      4548 Jan 21 07:39 pilotlog.txt
[2026-01-21 07:39:50] -rw------- 1 ek ek    489720 Jan 21 07:39 log.48299581._000011.job.log.1
[2026-01-21 07:39:50] -rw------- 1 ek ek       357 Jan 21 07:39 output.list
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek       620 Jan 21 07:39 runtime_log
[2026-01-21 07:39:50] -rw------- 1 ek ek    757760 Jan 21 07:39 result.tar.gz
[2026-01-21 07:39:50] -rw------- 1 ek ek       665 Jan 21 07:39 xqHNDmmLU28n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqMpKDmXQeHhn.diag
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek      9501 Jan 21 07:39 runtime_log.err
[2026-01-21 07:39:50] -rw-rw-r-- 1 ek ek     21231 Jan 21 07:39 stderr.txt
[2026-01-21 07:39:50] HITS file was successfully produced:
[2026-01-21 07:39:50] -rw------- 1 ek ek 171280346 Jan 21 07:39 shared/HITS.pool.root.1
[2026-01-21 07:39:50]  *** Contents of shared directory: ***
[2026-01-21 07:39:50] total 420688
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek 258121212 Jan 21 06:45 ATLAS.root_0
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek    597777 Jan 21 06:45 input.tar.gz
[2026-01-21 07:39:50] -rw-r--r-- 2 ek ek     15845 Jan 21 06:45 start_atlas.sh
[2026-01-21 07:39:50] -rw------- 1 ek ek 171280346 Jan 21 07:39 HITS.pool.root.1
[2026-01-21 07:39:50] -rw------- 1 ek ek    757760 Jan 21 07:39 result.tar.gz
07:39:51 (1396552): run_atlas exited; CPU time 12244.194698
07:39:51 (1396552): called boinc_finish(0)

</stderr_txt>
]]>

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