Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
15:34:51 (3169317): wrapper (7.7.26015): starting
15:34:51 (3169317): wrapper: running run_atlas (--nthreads 12)
[2026-01-20 15:34:51] Arguments: --nthreads 12
[2026-01-20 15:34:51] Threads: 12
[2026-01-20 15:34:51] Checking for CVMFS
[2026-01-20 15:34:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 15:34:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 15:34:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 15:34:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 15:34:52] 2.12.7.0 3035651 314 51744 155359 2 89 4154555 4194304 1457 130560 0 302298 99.985 15224 2372 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-20 15:34:52] CVMFS is ok
[2026-01-20 15:34:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 15:34:52] Checking for apptainer binary...
[2026-01-20 15:34:52] apptainer is not installed, using version from CVMFS
[2026-01-20 15:34:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 15:34:52] Trebeth
[2026-01-20 15:34:52] apptainer works
[2026-01-20 15:34:52] Set ATHENA_PROC_NUMBER=12
[2026-01-20 15:34:52] Set ATHENA_CORE_NUMBER=12
[2026-01-20 15:34:52] Starting ATLAS job with PandaID=6976469415
[2026-01-20 15:34:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-20 18:23:26]  *** The last 200 lines of the pilot log: ***
[2026-01-20 18:23:26] 2026-01-20 23:22:34,369 | INFO     | mean y: 3151812.13125
[2026-01-20 18:23:26] 2026-01-20 23:22:34,369 | INFO     | intersect: -212111195876.31323
[2026-01-20 18:23:26] 2026-01-20 23:22:34,369 | INFO     | chi2: 6.107426184270136
[2026-01-20 18:23:26] 2026-01-20 23:22:34,369 | INFO     | current chi2=6.107426184270136 (change=31.961401288910995 %)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,369 | INFO     | sum of square deviations: 1154790061.8967798
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | sum of deviations: 158256747492.41284
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | mean x: 1768946021.5741935
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | mean y: 3159383.7032258064
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | intersect: -242419816965.91348
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | chi2: 5.820460016812987
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | current chi2=5.820460016812987 (change=4.6986432385583194 %)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | right removable region: 154
[2026-01-20 18:23:26] 2026-01-20 23:22:34,370 | INFO     | sum of square deviations: 1270105439.375
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | sum of deviations: 36324134854.125
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | mean x: 1768946479.0625
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | mean y: 3160962.1875
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | intersect: -50587481722.41907
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | chi2: 5.55868021322321
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | current chi2=5.55868021322321 (change=38.07459951544846 %)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,371 | INFO     | sum of square deviations: 1154689777.7419307
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | sum of deviations: -15601236354.258057
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | mean x: 1768946631.580645
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | mean y: 3229550.980645161
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | intersect: 23903808762.245037
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | chi2: 3.337348893258702
[2026-01-20 18:23:26] 2026-01-20 23:22:34,372 | INFO     | current chi2=3.337348893258702 (change=39.961487884845695 %)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | sum of square deviations: 1046492886.693334
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | sum of deviations: -26188606816.146667
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | mean x: 1768946784.0933332
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | mean y: 3244417.6533333333
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | intersect: 44271344465.31559
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | chi2: 3.250417117531666
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | current chi2=3.250417117531666 (change=2.6048153341903992 %)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,373 | INFO     | left removable region: 30
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | sum of square deviations: 591212394.0887076
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | sum of deviations: 21694304759.96774
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | mean x: 1768946906.153226
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | mean y: 3363339.580645161
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | intersect: -64907443115.082504
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | chi2: 0.0025557427281910506
[2026-01-20 18:23:26] 2026-01-20 23:22:34,374 | INFO     | current memory leak: 36.69 B/s (using 124 data points, chi2=0.00)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | could have reported an average CPU frequency of 2497 MHz (9 samples)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | ..............................
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . Timing measurements:
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . get job = 0 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . initial setup = 5 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . payload setup = 4 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . stage-in = 0 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . payload execution = 10025 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . stage-out = 0 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | . log creation = 0 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,375 | INFO     | ..............................
[2026-01-20 18:23:26] 2026-01-20 23:22:34,573 | INFO     | 
[2026-01-20 18:23:26] 2026-01-20 23:22:34,574 | INFO     | job summary report
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | --------------------------------------------------
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | PanDA job id: 6976469415
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | task id: 47961985
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | errors: (none)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-20 18:23:26] 2026-01-20 23:22:34,575 | INFO     | pilot state: finished 
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | transexitcode: 0
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | exeerrorcode: 0
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | exeerrordiag: 
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | exitcode: 0
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | exitmsg: OK
[2026-01-20 18:23:26] 2026-01-20 23:22:34,576 | INFO     | cpuconsumptiontime: 109004 s
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | nevents: 350
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | neventsw: 0
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | pid: 3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | pgrp: 3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | corecount: 12
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | event service: False
[2026-01-20 18:23:26] 2026-01-20 23:22:34,577 | INFO     | sizes: {0: 2284330, 1: 2284847, 11: 2284847, 10033: 2314251, 10034: 2314250, 10035: 2323314, 10036: 2323498, 10039: 2323808}
[2026-01-20 18:23:26] 2026-01-20 23:22:34,578 | INFO     | --------------------------------------------------
[2026-01-20 18:23:26] 2026-01-20 23:22:34,578 | INFO     | 
[2026-01-20 18:23:26] 2026-01-20 23:22:34,578 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-20 18:23:26] 2026-01-20 23:22:34,596 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,599 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,600 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-20 18:23:26] 2026-01-20 23:22:34,600 | INFO     | job 6976469415 has completed (purged errors)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,600 | INFO     | overall cleanup function is called
[2026-01-20 18:23:26] 2026-01-20 23:22:34,716 | WARNING  | process 3178118 can no longer be monitored (due to stat problems) - aborting
[2026-01-20 18:23:26] 2026-01-20 23:22:34,824 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,825 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,825 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-20 18:23:26] 2026-01-20 23:22:34,825 | WARNING  | maxPSS not found in memory monitor output
[2026-01-20 18:23:26] 2026-01-20 23:22:34,826 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/3/PanDA_Pilot-6976469415/payload.stdout) since it has not been created yet
[2026-01-20 18:23:26] 2026-01-20 23:22:34,826 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-20 18:23:26] 2026-01-20 23:22:34,839 | INFO     | sufficient remaining disk space (384962658304 B)
[2026-01-20 18:23:26] 2026-01-20 23:22:34,839 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-20 18:23:26] 2026-01-20 23:22:34,839 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/3/PanDA_Pilot-6976469415/HITS.47961985._001380.pool.root.1 since it does not exist
[2026-01-20 18:23:26] 2026-01-20 23:22:34,971 | INFO     | number of running child processes to parent process 3178118: 1
[2026-01-20 18:23:26] 2026-01-20 23:22:34,971 | INFO     | maximum number of monitored processes: 17
[2026-01-20 18:23:26] 2026-01-20 23:22:34,971 | INFO     | aborting job monitoring since job object (job id=6976469415) has expired
[2026-01-20 18:23:26] 2026-01-20 23:22:35,623 | INFO     | --- collectZombieJob: --- 10, [3178118]
[2026-01-20 18:23:26] 2026-01-20 23:22:35,623 | INFO     | zombie collector waiting for pid 3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:35,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-20 18:23:26] 2026-01-20 23:22:35,624 | INFO     | collected zombie processes
[2026-01-20 18:23:26] 2026-01-20 23:22:35,624 | INFO     | will attempt to kill all subprocesses of pid=3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:35,798 | INFO     | process IDs to be killed: [3178118] (in reverse order)
[2026-01-20 18:23:26] 2026-01-20 23:22:35,846 | WARNING  | found no corresponding commands to process id(s)
[2026-01-20 18:23:26] 2026-01-20 23:22:35,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-20 18:23:26] 2026-01-20 23:22:35,849 | INFO     | did not find any defunct processes belonging to 3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:35,852 | INFO     | did not find any defunct processes belonging to 3178118
[2026-01-20 18:23:26] 2026-01-20 23:22:35,852 | INFO     | ready for new job
[2026-01-20 18:23:26] 2026-01-20 23:22:35,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-20 18:23:26] 2026-01-20 23:22:35,854 | INFO     | **************************************
[2026-01-20 18:23:26] 2026-01-20 23:22:35,854 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-20 18:23:26] 2026-01-20 23:22:35,854 | INFO     | **************************************
[2026-01-20 18:23:26] 2026-01-20 23:22:35,854 | INFO     | 
[2026-01-20 18:23:26] 2026-01-20 23:22:35,878 | INFO     | architecture information:
[2026-01-20 18:23:26] 2026-01-20 23:22:35,879 | INFO     | executing command: cat /etc/os-release
[2026-01-20 18:23:26] 2026-01-20 23:22:35,889 | INFO     | cat /etc/os-release:
[2026-01-20 18:23:26] NAME="CentOS Linux"
[2026-01-20 18:23:26] VERSION="7 (Core)"
[2026-01-20 18:23:26] ID="centos"
[2026-01-20 18:23:26] ID_LIKE="rhel fedora"
[2026-01-20 18:23:26] VERSION_ID="7"
[2026-01-20 18:23:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-20 18:23:26] ANSI_COLOR="0;31"
[2026-01-20 18:23:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-20 18:23:26] HOME_URL="https://www.centos.org/"
[2026-01-20 18:23:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-20 18:23:26] 
[2026-01-20 18:23:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-20 18:23:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-20 18:23:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-20 18:23:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-20 18:23:26] 
[2026-01-20 18:23:26] 2026-01-20 23:22:35,889 | INFO     | **************************************
[2026-01-20 18:23:26] 2026-01-20 23:22:36,393 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-20 18:23:26] 2026-01-20 23:22:36,408 | INFO     | sufficient remaining disk space (384962658304 B)
[2026-01-20 18:23:26] 2026-01-20 23:22:36,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-20 18:23:26] 2026-01-20 23:22:36,408 | INFO     | current server update state: UPDATING_FINAL
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | INFO     | update_server=False
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-20 18:23:26] 2026-01-20 23:22:36,409 | INFO     | aborting loop
[2026-01-20 18:23:26] 2026-01-20 23:22:36,418 | INFO     | all payload control threads have been joined
[2026-01-20 18:23:26] 2026-01-20 23:22:37,102 | INFO     | all data control threads have been joined
[2026-01-20 18:23:26] 2026-01-20 23:22:37,406 | INFO     | all job control threads have been joined
[2026-01-20 18:23:26] 2026-01-20 23:22:37,410 | INFO     | [job] retrieve thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:37,414 | INFO     | [job] queue monitor thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:37,415 | INFO     | [job] job monitor thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:37,422 | INFO     | [payload] control thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:37,622 | INFO     | [payload] execute_payloads thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:37,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-20 18:23:26] 2026-01-20 23:22:38,106 | INFO     | [data] control thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,191 | INFO     | [payload] validate_post thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,246 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,410 | INFO     | [job] control thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,415 | INFO     | [data] copytool_out thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,422 | INFO     | [job] validate thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,458 | INFO     | [job] create_data_payload thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,586 | INFO     | [payload] validate_pre thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,634 | INFO     | [payload] failed_post thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:38,762 | INFO     | [data] copytool_in thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:22:41,685 | INFO     | [data] queue_monitor thread has finished
[2026-01-20 18:23:26] 2026-01-20 23:23:06,639 | INFO     | PID=3173296 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-20 18:23:26] 2026-01-20 23:23:06,639 | INFO     | .. there are 3 such processes running
[2026-01-20 18:23:26] 2026-01-20 23:23:06,639 | INFO     | found 0 job(s) in 20 queues
[2026-01-20 18:23:26] 2026-01-20 23:23:06,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-20 18:23:26] 2026-01-20 23:23:06,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-20 18:23:26] 2026-01-20 23:23:20,822 | INFO     | [monitor] cgroup control has ended
[2026-01-20 18:23:26] 2026-01-20 23:23:21,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194214352704)>', '<ExcThread(monitor, started 140193629726464)>']
[2026-01-20 18:23:26] 2026-01-20 23:23:21,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-20 18:23:26] 2026-01-20 23:23:21,699 | INFO     | [monitor] control thread has ended
[2026-01-20 18:23:26] 2026-01-20 23:23:26,594 | INFO     | all workflow threads have been joined
[2026-01-20 18:23:26] 2026-01-20 23:23:26,595 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-20 18:23:26] 2026-01-20 23:23:26,595 | INFO     | traces error code: 0
[2026-01-20 18:23:26] 2026-01-20 23:23:26,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-20 18:23:26] 2026-01-20 23:23:26,689 [wrapper] ==== pilot stdout END ====
[2026-01-20 18:23:26] 2026-01-20 23:23:26,692 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-20 18:23:26] 2026-01-20 23:23:26,694 [wrapper] pilotpid: 3173296
[2026-01-20 18:23:26] 2026-01-20 23:23:26,696 [wrapper] Pilot exit status: 0
[2026-01-20 18:23:26] 2026-01-20 23:23:26,704 [wrapper] pandaids: 6976469415
[2026-01-20 18:23:26] 2026-01-20 23:23:26,734 [wrapper] cleanup supervisor_pilot 3246217 3173297
[2026-01-20 18:23:26] 2026-01-20 23:23:26,736 [wrapper] Test setup, not cleaning
[2026-01-20 18:23:26] 2026-01-20 23:23:26,738 [wrapper] apfmon messages muted
[2026-01-20 18:23:26] 2026-01-20 23:23:26,740 [wrapper] ==== wrapper stdout END ====
[2026-01-20 18:23:26] 2026-01-20 23:23:26,743 [wrapper] ==== wrapper stderr END ====
[2026-01-20 18:23:26]  *** Error codes and diagnostics ***
[2026-01-20 18:23:26]     "exeErrorCode": 0,
[2026-01-20 18:23:26]     "exeErrorDiag": "",
[2026-01-20 18:23:26]     "pilotErrorCode": 0,
[2026-01-20 18:23:26]     "pilotErrorDiag": "",
[2026-01-20 18:23:26]  *** Listing of results directory ***
[2026-01-20 18:23:26] total 745240
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc    584422 Jan 20 09:43 pilot3.tar.gz
[2026-01-20 18:23:26] -rwx------ 1 boinc boinc     36322 Jan 20 09:55 runpilot2-wrapper.sh
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc      5111 Jan 20 09:57 queuedata.json
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc       100 Jan 20 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-20 18:23:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 20 15:34 run_atlas
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc       105 Jan 20 15:34 job.xml
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc     15845 Jan 20 15:34 start_atlas.sh
[2026-01-20 18:23:26] drwxrwx--x 2 boinc boinc      4096 Jan 20 15:34 shared
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc    597967 Jan 20 15:34 input.tar.gz
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc      7579 Jan 20 15:34 init_data.xml
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc 412485801 Jan 20 15:34 EVNT.47961981._000045.pool.root.1
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc         0 Jan 20 15:34 boinc_lockfile
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc      2876 Jan 20 15:34 pandaJob.out
[2026-01-20 18:23:26] -rw------- 1 boinc boinc        50 Jan 20 15:34 setup.sh.local
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   1003869 Jan 20 15:34 agis_schedconf.cvmfs.json
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   1516246 Jan 20 15:35 agis_ddmendpoints.agis.ALL.json
[2026-01-20 18:23:26] -rw------- 1 boinc boinc       430 Jan 20 15:35 workernode_map.json
[2026-01-20 18:23:26] drwx------ 5 boinc boinc      4096 Jan 20 15:35 pilot3
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc       531 Jan 20 18:14 boinc_task_state.xml
[2026-01-20 18:23:26] -rw------- 1 boinc boinc 340179571 Jan 20 18:22 HITS.47961985._001380.pool.root.1
[2026-01-20 18:23:26] -rw------- 1 boinc boinc      1039 Jan 20 18:22 memory_monitor_summary.json
[2026-01-20 18:23:26] -rw------- 1 boinc boinc        95 Jan 20 18:22 pilot_heartbeat.json
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   1785690 Jan 20 18:22 log.47961985._001380.job.log.tgz.1
[2026-01-20 18:23:26] -rw------- 1 boinc boinc      6903 Jan 20 18:22 heartbeat.json
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc      8192 Jan 20 18:23 boinc_mmap_file
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc        29 Jan 20 18:23 wrapper_checkpoint.txt
[2026-01-20 18:23:26] -rw------- 1 boinc boinc      4827 Jan 20 18:23 pilotlog.txt
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   1473755 Jan 20 18:23 log.47961985._001380.job.log.1
[2026-01-20 18:23:26] -rw------- 1 boinc boinc       353 Jan 20 18:23 output.list
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc       620 Jan 20 18:23 runtime_log
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   3276800 Jan 20 18:23 result.tar.gz
[2026-01-20 18:23:26] -rw------- 1 boinc boinc       656 Jan 20 18:23 TmIMDmGKS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLXvKDmx0uh0m.diag
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc      9404 Jan 20 18:23 runtime_log.err
[2026-01-20 18:23:26] -rw-r--r-- 1 boinc boinc     21291 Jan 20 18:23 stderr.txt
[2026-01-20 18:23:26] HITS file was successfully produced:
[2026-01-20 18:23:26] -rw------- 1 boinc boinc 340179571 Jan 20 18:22 shared/HITS.pool.root.1
[2026-01-20 18:23:26]  *** Contents of shared directory: ***
[2026-01-20 18:23:26] total 738836
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc     15845 Jan 20 15:34 start_atlas.sh
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc    597967 Jan 20 15:34 input.tar.gz
[2026-01-20 18:23:26] -rw-r--r-- 2 boinc boinc 412485801 Jan 20 15:34 ATLAS.root_0
[2026-01-20 18:23:26] -rw------- 1 boinc boinc 340179571 Jan 20 18:22 HITS.pool.root.1
[2026-01-20 18:23:26] -rw------- 1 boinc boinc   3276800 Jan 20 18:23 result.tar.gz
18:23:27 (3169317): run_atlas exited; CPU time 109014.691603
18:23:27 (3169317): called boinc_finish(0)

</stderr_txt>
]]>

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