Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:20:19 (3339181): wrapper (7.7.26015): starting
21:20:19 (3339181): wrapper: running run_atlas (--nthreads 12)
[2026-01-20 21:20:19] Arguments: --nthreads 12
[2026-01-20 21:20:19] Threads: 12
[2026-01-20 21:20:19] Checking for CVMFS
[2026-01-20 21:20:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 21:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 21:20:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 21:20:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 21:20:19] 2.12.7.0 3035651 659 55468 155367 1 90 2096516 4194304 1724 130560 0 769471 99.990 25011 2321 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-20 21:20:19] CVMFS is ok
[2026-01-20 21:20:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 21:20:19] Checking for apptainer binary...
[2026-01-20 21:20:19] apptainer is not installed, using version from CVMFS
[2026-01-20 21:20:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 21:20:19] Trebeth
[2026-01-20 21:20:19] apptainer works
[2026-01-20 21:20:19] Set ATHENA_PROC_NUMBER=12
[2026-01-20 21:20:19] Set ATHENA_CORE_NUMBER=12
[2026-01-20 21:20:19] Starting ATLAS job with PandaID=6976469927
[2026-01-20 21:20:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-21 00:13:03]  *** The last 200 lines of the pilot log: ***
[2026-01-21 00:13:03] 2026-01-21 05:12:07,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-21 00:13:03] 2026-01-21 05:12:07,401 | INFO     | fitting pss+swap vs Time
[2026-01-21 00:13:03] 2026-01-21 05:12:07,402 | INFO     | sum of square deviations: 1496585143.0059154
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | sum of deviations: 101595231331.4793
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | mean x: 1768967184.4142013
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | mean y: 3085488.550295858
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | intersect: -120082718622.39296
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | chi2: 9.345955992350914
[2026-01-21 00:13:03] 2026-01-21 05:12:07,403 | INFO     | sum of square deviations: 1367655237.1219487
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | sum of deviations: 160836266230.8536
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | mean x: 1768967031.9268293
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | mean y: 3155460.737804878
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | intersect: -208027380874.80023
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | chi2: 6.143140642598567
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | current chi2=6.143140642598567 (change=34.269531681656254 %)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,404 | INFO     | sum of square deviations: 1246353381.1823869
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | sum of deviations: 166702770451.02512
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | mean x: 1768966879.4402516
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | mean y: 3162540.371069182
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | intersect: -236600423642.41565
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | chi2: 5.85291881989042
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | current chi2=5.85291881989042 (change=4.724323267086753 %)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | right removable region: 158
[2026-01-21 00:13:03] 2026-01-21 05:12:07,405 | INFO     | sum of square deviations: 1367612537.1219487
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | sum of deviations: 38111282181.36584
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | mean x: 1768967336.9268293
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | mean y: 3160450.0304878047
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | intersect: -49292682866.171936
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | chi2: 5.928165670023437
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | current chi2=5.928165670023437 (change=36.56972411516518 %)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,406 | INFO     | sum of square deviations: 1246267981.1823869
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | sum of deviations: -15214764109.226418
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | mean x: 1768967489.4402516
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | mean y: 3227448.6603773586
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | intersect: 21599243293.65469
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | chi2: 3.7243840347508153
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | current chi2=3.7243840347508153 (change=37.17476463952987 %)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,407 | INFO     | sum of square deviations: 1132367407.0649304
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | sum of deviations: -26590882437.77923
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | mean x: 1768967641.922078
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | mean y: 3242649.935064935
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | intersect: 41543126533.124504
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | chi2: 3.6386588013444414
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | current chi2=3.6386588013444414 (change=2.3017291612922883 %)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | left removable region: 30
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | sum of square deviations: 650208913.71875
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | sum of deviations: 23494451448.53125
[2026-01-21 00:13:03] 2026-01-21 05:12:07,408 | INFO     | mean x: 1768967763.953125
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | mean y: 3365569.421875
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | intersect: -63915978455.73694
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | chi2: 0.0025878950741999194
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | current memory leak: 36.13 B/s (using 128 data points, chi2=0.00)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | could have reported an average CPU frequency of 2873 MHz (9 samples)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | ..............................
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . Timing measurements:
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . get job = 0 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . initial setup = 14 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . payload setup = 4 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . stage-in = 0 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . payload execution = 10264 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . stage-out = 0 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,409 | INFO     | . log creation = 0 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,410 | INFO     | ..............................
[2026-01-21 00:13:03] 2026-01-21 05:12:07,488 | INFO     | 
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | job summary report
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | --------------------------------------------------
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | PanDA job id: 6976469927
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | task id: 47961985
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | errors: (none)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | pilot state: finished 
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | transexitcode: 0
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | exeerrorcode: 0
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | exeerrordiag: 
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | exitcode: 0
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | exitmsg: OK
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | cpuconsumptiontime: 111709 s
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | nevents: 350
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | neventsw: 0
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | pid: 3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | pgrp: 3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | corecount: 12
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | event service: False
[2026-01-21 00:13:03] 2026-01-21 05:12:07,489 | INFO     | sizes: {0: 2284557, 1: 2284847, 11: 2284847, 10272: 2314334, 10275: 2323652}
[2026-01-21 00:13:03] 2026-01-21 05:12:07,490 | INFO     | --------------------------------------------------
[2026-01-21 00:13:03] 2026-01-21 05:12:07,490 | INFO     | 
[2026-01-21 00:13:03] 2026-01-21 05:12:07,490 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | job 6976469927 has completed (purged errors)
[2026-01-21 00:13:03] 2026-01-21 05:12:07,506 | INFO     | overall cleanup function is called
[2026-01-21 00:13:03] 2026-01-21 05:12:08,524 | INFO     | --- collectZombieJob: --- 10, [3348095]
[2026-01-21 00:13:03] 2026-01-21 05:12:08,524 | INFO     | zombie collector waiting for pid 3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:08,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-21 00:13:03] 2026-01-21 05:12:08,524 | INFO     | collected zombie processes
[2026-01-21 00:13:03] 2026-01-21 05:12:08,524 | INFO     | will attempt to kill all subprocesses of pid=3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:08,700 | INFO     | process IDs to be killed: [3348095] (in reverse order)
[2026-01-21 00:13:03] 2026-01-21 05:12:08,766 | WARNING  | found no corresponding commands to process id(s)
[2026-01-21 00:13:03] 2026-01-21 05:12:08,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-21 00:13:03] 2026-01-21 05:12:08,773 | INFO     | did not find any defunct processes belonging to 3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:08,778 | INFO     | did not find any defunct processes belonging to 3348095
[2026-01-21 00:13:03] 2026-01-21 05:12:08,778 | INFO     | ready for new job
[2026-01-21 00:13:03] 2026-01-21 05:12:08,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-21 00:13:03] 2026-01-21 05:12:08,781 | INFO     | **************************************
[2026-01-21 00:13:03] 2026-01-21 05:12:08,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-21 00:13:03] 2026-01-21 05:12:08,782 | INFO     | **************************************
[2026-01-21 00:13:03] 2026-01-21 05:12:08,782 | INFO     | 
[2026-01-21 00:13:03] 2026-01-21 05:12:08,801 | INFO     | architecture information:
[2026-01-21 00:13:03] 2026-01-21 05:12:08,802 | INFO     | executing command: cat /etc/os-release
[2026-01-21 00:13:03] 2026-01-21 05:12:08,813 | INFO     | cat /etc/os-release:
[2026-01-21 00:13:03] NAME="CentOS Linux"
[2026-01-21 00:13:03] VERSION="7 (Core)"
[2026-01-21 00:13:03] ID="centos"
[2026-01-21 00:13:03] ID_LIKE="rhel fedora"
[2026-01-21 00:13:03] VERSION_ID="7"
[2026-01-21 00:13:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-21 00:13:03] ANSI_COLOR="0;31"
[2026-01-21 00:13:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-21 00:13:03] HOME_URL="https://www.centos.org/"
[2026-01-21 00:13:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-21 00:13:03] 
[2026-01-21 00:13:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-21 00:13:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-21 00:13:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-21 00:13:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-21 00:13:03] 
[2026-01-21 00:13:03] 2026-01-21 05:12:08,813 | INFO     | **************************************
[2026-01-21 00:13:03] 2026-01-21 05:12:09,315 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-21 00:13:03] 2026-01-21 05:12:09,330 | INFO     | sufficient remaining disk space (388286644224 B)
[2026-01-21 00:13:03] 2026-01-21 05:12:09,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-21 00:13:03] 2026-01-21 05:12:09,331 | INFO     | current server update state: UPDATING_FINAL
[2026-01-21 00:13:03] 2026-01-21 05:12:09,331 | INFO     | update_server=False
[2026-01-21 00:13:03] 2026-01-21 05:12:09,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-21 00:13:03] 2026-01-21 05:12:09,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-21 00:13:03] 2026-01-21 05:12:09,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-21 00:13:03] 2026-01-21 05:12:09,782 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-21 00:13:03] 2026-01-21 05:12:09,782 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-21 00:13:03] 2026-01-21 05:12:09,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-21 00:13:03] 2026-01-21 05:12:09,782 | INFO     | will abort loop
[2026-01-21 00:13:03] 2026-01-21 05:12:10,182 | INFO     | all payload control threads have been joined
[2026-01-21 00:13:03] 2026-01-21 05:12:10,185 | INFO     | all job control threads have been joined
[2026-01-21 00:13:03] 2026-01-21 05:12:10,250 | INFO     | all data control threads have been joined
[2026-01-21 00:13:03] 2026-01-21 05:12:10,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-21 00:13:03] 2026-01-21 05:12:10,335 | INFO     | [job] retrieve thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,335 | INFO     | [job] queue monitor thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,482 | INFO     | [payload] failed_post thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,678 | INFO     | [job] validate thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,710 | INFO     | [payload] validate_post thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,786 | INFO     | [job] job monitor thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:10,886 | INFO     | [job] create_data_payload thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,002 | INFO     | [payload] validate_pre thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,088 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,188 | INFO     | [payload] control thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,190 | INFO     | [job] control thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,230 | INFO     | [data] copytool_in thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,254 | INFO     | [data] control thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:11,834 | INFO     | [payload] execute_payloads thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:12,314 | INFO     | [data] copytool_out thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:13,334 | INFO     | [data] queue_monitor thread has finished
[2026-01-21 00:13:03] 2026-01-21 05:12:39,759 | INFO     | PID=3343257 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-21 00:13:03] 2026-01-21 05:12:39,759 | INFO     | .. there are 3 such processes running
[2026-01-21 00:13:03] 2026-01-21 05:12:39,760 | INFO     | found 0 job(s) in 20 queues
[2026-01-21 00:13:03] 2026-01-21 05:12:39,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-21 00:13:03] 2026-01-21 05:12:39,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-21 00:13:03] 2026-01-21 05:12:58,158 | INFO     | [monitor] cgroup control has ended
[2026-01-21 00:13:03] 2026-01-21 05:12:58,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217709623104)>', '<ExcThread(monitor, started 140217050720000)>']
[2026-01-21 00:13:03] 2026-01-21 05:12:58,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-21 00:13:03] 2026-01-21 05:12:58,835 | INFO     | [monitor] control thread has ended
[2026-01-21 00:13:03] 2026-01-21 05:13:03,206 | INFO     | all workflow threads have been joined
[2026-01-21 00:13:03] 2026-01-21 05:13:03,207 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-21 00:13:03] 2026-01-21 05:13:03,207 | INFO     | traces error code: 0
[2026-01-21 00:13:03] 2026-01-21 05:13:03,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-21 00:13:03] 2026-01-21 05:13:03,345 [wrapper] ==== pilot stdout END ====
[2026-01-21 00:13:03] 2026-01-21 05:13:03,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-21 00:13:03] 2026-01-21 05:13:03,349 [wrapper] pilotpid: 3343257
[2026-01-21 00:13:03] 2026-01-21 05:13:03,351 [wrapper] Pilot exit status: 0
[2026-01-21 00:13:03] 2026-01-21 05:13:03,357 [wrapper] pandaids: 6976469927
[2026-01-21 00:13:03] 2026-01-21 05:13:03,398 [wrapper] cleanup supervisor_pilot 3403265 3343258
[2026-01-21 00:13:03] 2026-01-21 05:13:03,400 [wrapper] Test setup, not cleaning
[2026-01-21 00:13:03] 2026-01-21 05:13:03,401 [wrapper] apfmon messages muted
[2026-01-21 00:13:03] 2026-01-21 05:13:03,402 [wrapper] ==== wrapper stdout END ====
[2026-01-21 00:13:03] 2026-01-21 05:13:03,404 [wrapper] ==== wrapper stderr END ====
[2026-01-21 00:13:03]  *** Error codes and diagnostics ***
[2026-01-21 00:13:03]     "exeErrorCode": 0,
[2026-01-21 00:13:03]     "exeErrorDiag": "",
[2026-01-21 00:13:03]     "pilotErrorCode": 0,
[2026-01-21 00:13:03]     "pilotErrorDiag": "",
[2026-01-21 00:13:03]  *** Listing of results directory ***
[2026-01-21 00:13:03] total 758208
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc    584422 Jan 20 09:43 pilot3.tar.gz
[2026-01-21 00:13:03] -rwx------ 1 boinc boinc     36322 Jan 20 09:55 runpilot2-wrapper.sh
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc      5111 Jan 20 09:57 queuedata.json
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc       100 Jan 20 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-21 00:13:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 20 21:20 run_atlas
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc       105 Jan 20 21:20 job.xml
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc      7579 Jan 20 21:20 init_data.xml
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc 415634406 Jan 20 21:20 EVNT.47961981._000055.pool.root.1
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc     15845 Jan 20 21:20 start_atlas.sh
[2026-01-21 00:13:03] drwxrwx--x 2 boinc boinc      4096 Jan 20 21:20 shared
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc    597964 Jan 20 21:20 input.tar.gz
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc         0 Jan 20 21:20 boinc_lockfile
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc      2876 Jan 20 21:20 pandaJob.out
[2026-01-21 00:13:03] -rw------- 1 boinc boinc        50 Jan 20 21:20 setup.sh.local
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   1002345 Jan 20 21:20 agis_schedconf.cvmfs.json
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   1516246 Jan 20 21:20 agis_ddmendpoints.agis.ALL.json
[2026-01-21 00:13:03] -rw------- 1 boinc boinc       430 Jan 20 21:20 workernode_map.json
[2026-01-21 00:13:03] drwx------ 5 boinc boinc      4096 Jan 20 21:20 pilot3
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc       531 Jan 21 00:03 boinc_task_state.xml
[2026-01-21 00:13:03] -rw------- 1 boinc boinc 350224775 Jan 21 00:11 HITS.47961985._001675.pool.root.1
[2026-01-21 00:13:03] -rw------- 1 boinc boinc        95 Jan 21 00:11 pilot_heartbeat.json
[2026-01-21 00:13:03] -rw------- 1 boinc boinc      1037 Jan 21 00:12 memory_monitor_summary.json
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   1797689 Jan 21 00:12 log.47961985._001675.job.log.tgz.1
[2026-01-21 00:13:03] -rw------- 1 boinc boinc      6908 Jan 21 00:12 heartbeat.json
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc      8192 Jan 21 00:12 boinc_mmap_file
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc        29 Jan 21 00:12 wrapper_checkpoint.txt
[2026-01-21 00:13:03] -rw------- 1 boinc boinc      5013 Jan 21 00:13 pilotlog.txt
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   1505890 Jan 21 00:13 log.47961985._001675.job.log.1
[2026-01-21 00:13:03] -rw------- 1 boinc boinc       353 Jan 21 00:13 output.list
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc       620 Jan 21 00:13 runtime_log
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   3317760 Jan 21 00:13 result.tar.gz
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc      9404 Jan 21 00:13 runtime_log.err
[2026-01-21 00:13:03] -rw------- 1 boinc boinc       656 Jan 21 00:13 f1IMDmGKS28n9Rq4apOajLDm4fhM0noT9bVo0NGKDms9oKDmPqhQ3n.diag
[2026-01-21 00:13:03] -rw-r--r-- 1 boinc boinc     20696 Jan 21 00:13 stderr.txt
[2026-01-21 00:13:03] HITS file was successfully produced:
[2026-01-21 00:13:03] -rw------- 1 boinc boinc 350224775 Jan 21 00:11 shared/HITS.pool.root.1
[2026-01-21 00:13:03]  *** Contents of shared directory: ***
[2026-01-21 00:13:03] total 751764
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc 415634406 Jan 20 21:20 ATLAS.root_0
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc     15845 Jan 20 21:20 start_atlas.sh
[2026-01-21 00:13:03] -rw-r--r-- 2 boinc boinc    597964 Jan 20 21:20 input.tar.gz
[2026-01-21 00:13:03] -rw------- 1 boinc boinc 350224775 Jan 21 00:11 HITS.pool.root.1
[2026-01-21 00:13:03] -rw------- 1 boinc boinc   3317760 Jan 21 00:13 result.tar.gz
00:13:05 (3339181): run_atlas exited; CPU time 111683.246021
00:13:05 (3339181): called boinc_finish(0)

</stderr_txt>
]]>

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