Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:47 (23191): wrapper (7.7.26015): starting
06:38:47 (23191): wrapper: running run_atlas (--nthreads 8)
[2026-01-20 06:38:47] Arguments: --nthreads 8
[2026-01-20 06:38:47] Threads: 8
[2026-01-20 06:38:47] Checking for CVMFS
[2026-01-20 06:38:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 06:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 06:38:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 06:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 06:38:47] 2.11.2.0 2895 152450 119844 155344 0 1 10156698 20275200 1 130560 0 40702519 99.828 10158153 31590 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-20 06:38:47] CVMFS is ok
[2026-01-20 06:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-20 06:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-20 06:38:47] Further information can be found at the LHC@home message board.
[2026-01-20 06:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 06:38:47] Checking for apptainer binary...
[2026-01-20 06:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-20 06:38:47] Running /usr/bin/apptainer --version
[2026-01-20 06:38:47] apptainer version 1.3.2-1.el7
[2026-01-20 06:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 06:38:49] c-204-7.aglt2.org
[2026-01-20 06:38:49] apptainer works
[2026-01-20 06:38:49] Set ATHENA_PROC_NUMBER=8
[2026-01-20 06:38:49] Set ATHENA_CORE_NUMBER=8
[2026-01-20 06:38:49] Starting ATLAS job with PandaID=6968097467
[2026-01-20 06:38:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-20 09:47:48]  *** The last 200 lines of the pilot log: ***
[2026-01-20 09:47:48] 2026-01-20 14:47:14,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-20 09:47:48] 2026-01-20 14:47:14,761 | INFO     | time since job start (11286s) is within the limit (349056.0s)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,286 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-20 09:47:48] 2026-01-20 14:47:15,289 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1596.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,290 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6968097467/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,291 | INFO     | extracted standard info from prmon json
[2026-01-20 09:47:48] 2026-01-20 14:47:15,291 | INFO     | extracted standard memory fields from prmon json
[2026-01-20 09:47:48] 2026-01-20 14:47:15,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-20 09:47:48] 2026-01-20 14:47:15,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-20 09:47:48] 2026-01-20 14:47:15,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-20 09:47:48] 2026-01-20 14:47:15,296 | INFO     | fitting pss+swap vs Time
[2026-01-20 09:47:48] 2026-01-20 14:47:15,296 | INFO     | sum of square deviations: 1963274020.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,297 | INFO     | sum of deviations: -657708465.9999962
[2026-01-20 09:47:48] 2026-01-20 14:47:15,298 | INFO     | mean x: 1768914791.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,298 | INFO     | mean y: 2566063.9567567566
[2026-01-20 09:47:48] 2026-01-20 14:47:15,298 | INFO     | intersect: 595163033.0101718
[2026-01-20 09:47:48] 2026-01-20 14:47:15,298 | INFO     | chi2: 2.4747234802749176
[2026-01-20 09:47:48] 2026-01-20 14:47:15,299 | INFO     | sum of square deviations: 1808350185.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,300 | INFO     | sum of deviations: 11812750619.5
[2026-01-20 09:47:48] 2026-01-20 14:47:15,300 | INFO     | mean x: 1768914638.5
[2026-01-20 09:47:48] 2026-01-20 14:47:15,300 | INFO     | mean y: 2578067.4833333334
[2026-01-20 09:47:48] 2026-01-20 14:47:15,300 | INFO     | intersect: -11552566320.53988
[2026-01-20 09:47:48] 2026-01-20 14:47:15,301 | INFO     | chi2: 1.712231138461274
[2026-01-20 09:47:48] 2026-01-20 14:47:15,301 | INFO     | current chi2=1.712231138461274 (change=30.811213773626868 %)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,301 | INFO     | sum of square deviations: 1661798600.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,302 | INFO     | sum of deviations: 11446521107.000002
[2026-01-20 09:47:48] 2026-01-20 14:47:15,302 | INFO     | mean x: 1768914486.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,302 | INFO     | mean y: 2577686.285714286
[2026-01-20 09:47:48] 2026-01-20 14:47:15,303 | INFO     | intersect: -12181761017.861141
[2026-01-20 09:47:48] 2026-01-20 14:47:15,303 | INFO     | chi2: 1.71342158089007
[2026-01-20 09:47:48] 2026-01-20 14:47:15,303 | INFO     | current chi2=1.71342158089007 (change=-0.06952580186490812 %)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,303 | INFO     | right removable region: 174
[2026-01-20 09:47:48] 2026-01-20 14:47:15,304 | INFO     | sum of square deviations: 1808350185.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,305 | INFO     | sum of deviations: -31840145691.500008
[2026-01-20 09:47:48] 2026-01-20 14:47:15,305 | INFO     | mean x: 1768914943.5
[2026-01-20 09:47:48] 2026-01-20 14:47:15,305 | INFO     | mean y: 2596436.5833333335
[2026-01-20 09:47:48] 2026-01-20 14:47:15,305 | INFO     | intersect: 31148394404.310196
[2026-01-20 09:47:48] 2026-01-20 14:47:15,305 | INFO     | chi2: 0.9511526844192709
[2026-01-20 09:47:48] 2026-01-20 14:47:15,306 | INFO     | current chi2=0.9511526844192709 (change=61.565294385391 %)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,306 | INFO     | sum of square deviations: 1661798600.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,307 | INFO     | sum of deviations: -33176385736.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,307 | INFO     | mean x: 1768915096.0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,307 | INFO     | mean y: 2597764.017142857
[2026-01-20 09:47:48] 2026-01-20 14:47:15,307 | INFO     | intersect: 35317472598.50639
[2026-01-20 09:47:48] 2026-01-20 14:47:15,308 | INFO     | chi2: 0.9222058378178721
[2026-01-20 09:47:48] 2026-01-20 14:47:15,308 | INFO     | current chi2=0.9222058378178721 (change=3.043343836964764 %)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,308 | INFO     | left removable region: 20
[2026-01-20 09:47:48] 2026-01-20 14:47:15,308 | INFO     | sum of square deviations: 1132458442.5
[2026-01-20 09:47:48] 2026-01-20 14:47:15,309 | INFO     | sum of deviations: -9585127274.000002
[2026-01-20 09:47:48] 2026-01-20 14:47:15,309 | INFO     | mean x: 1768915065.5
[2026-01-20 09:47:48] 2026-01-20 14:47:15,309 | INFO     | mean y: 2598715.350649351
[2026-01-20 09:47:48] 2026-01-20 14:47:15,310 | INFO     | intersect: 14974694293.783806
[2026-01-20 09:47:48] 2026-01-20 14:47:15,310 | INFO     | chi2: 0.09585030246744784
[2026-01-20 09:47:48] 2026-01-20 14:47:15,310 | INFO     | current memory leak: -8.46 B/s (using 154 data points, chi2=0.10)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,310 | INFO     | could have reported an average CPU frequency of 2005 MHz (10 samples)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | ..............................
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . Timing measurements:
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . get job = 0 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . initial setup = 2 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . payload setup = 8 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . stage-in = 0 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,311 | INFO     | . payload execution = 11246 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,312 | INFO     | . stage-out = 2 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,312 | INFO     | . log creation = 0 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,312 | INFO     | ..............................
[2026-01-20 09:47:48] 2026-01-20 14:47:15,734 | INFO     | 
[2026-01-20 09:47:48] 2026-01-20 14:47:15,734 | INFO     | job summary report
[2026-01-20 09:47:48] 2026-01-20 14:47:15,734 | INFO     | --------------------------------------------------
[2026-01-20 09:47:48] 2026-01-20 14:47:15,734 | INFO     | PanDA job id: 6968097467
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | task id: 48188673
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | errors: (none)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | pilot state: finished 
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | transexitcode: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | exeerrorcode: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | exeerrordiag: 
[2026-01-20 09:47:48] 2026-01-20 14:47:15,735 | INFO     | exitcode: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | exitmsg: OK
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | cpuconsumptiontime: 85140 s
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | nevents: 400
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | neventsw: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | pid: 1834
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | pgrp: 1834
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | corecount: 8
[2026-01-20 09:47:48] 2026-01-20 14:47:15,736 | INFO     | event service: False
[2026-01-20 09:47:48] 2026-01-20 14:47:15,737 | INFO     | sizes: {0: 2283893, 1: 2284148, 7: 2284410, 12: 2284438, 11258: 2313681, 11259: 2313680, 11262: 2322890, 11263: 2322946, 11269: 2323140}
[2026-01-20 09:47:48] 2026-01-20 14:47:15,737 | INFO     | --------------------------------------------------
[2026-01-20 09:47:48] 2026-01-20 14:47:15,737 | INFO     | 
[2026-01-20 09:47:48] 2026-01-20 14:47:15,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-20 09:47:48] 2026-01-20 14:47:15,766 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,766 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-20 09:47:48] 2026-01-20 14:47:15,769 | INFO     | job 6968097467 has completed (purged errors)
[2026-01-20 09:47:48] 2026-01-20 14:47:15,769 | INFO     | overall cleanup function is called
[2026-01-20 09:47:48] 2026-01-20 14:47:16,777 | INFO     | --- collectZombieJob: --- 10, [1834]
[2026-01-20 09:47:48] 2026-01-20 14:47:16,777 | INFO     | zombie collector waiting for pid 1834
[2026-01-20 09:47:48] 2026-01-20 14:47:16,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-20 09:47:48] 2026-01-20 14:47:16,778 | INFO     | collected zombie processes
[2026-01-20 09:47:48] 2026-01-20 14:47:16,778 | INFO     | will attempt to kill all subprocesses of pid=1834
[2026-01-20 09:47:48] 2026-01-20 14:47:16,873 | INFO     | process IDs to be killed: [1834] (in reverse order)
[2026-01-20 09:47:48] 2026-01-20 14:47:16,929 | WARNING  | found no corresponding commands to process id(s)
[2026-01-20 09:47:48] 2026-01-20 14:47:16,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-20 09:47:48] 2026-01-20 14:47:16,932 | INFO     | did not find any defunct processes belonging to 1834
[2026-01-20 09:47:48] 2026-01-20 14:47:16,935 | INFO     | did not find any defunct processes belonging to 1834
[2026-01-20 09:47:48] 2026-01-20 14:47:16,935 | INFO     | ready for new job
[2026-01-20 09:47:48] 2026-01-20 14:47:16,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-20 09:47:48] 2026-01-20 14:47:16,938 | INFO     | ***************************************
[2026-01-20 09:47:48] 2026-01-20 14:47:16,938 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-20 09:47:48] 2026-01-20 14:47:16,938 | INFO     | ***************************************
[2026-01-20 09:47:48] 2026-01-20 14:47:16,938 | INFO     | 
[2026-01-20 09:47:48] 2026-01-20 14:47:16,939 | INFO     | architecture information:
[2026-01-20 09:47:48] 2026-01-20 14:47:16,939 | INFO     | executing command: cat /etc/os-release
[2026-01-20 09:47:48] 2026-01-20 14:47:16,955 | INFO     | cat /etc/os-release:
[2026-01-20 09:47:48] NAME="CentOS Linux"
[2026-01-20 09:47:48] VERSION="7 (Core)"
[2026-01-20 09:47:48] ID="centos"
[2026-01-20 09:47:48] ID_LIKE="rhel fedora"
[2026-01-20 09:47:48] VERSION_ID="7"
[2026-01-20 09:47:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-20 09:47:48] ANSI_COLOR="0;31"
[2026-01-20 09:47:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-20 09:47:48] HOME_URL="https://www.centos.org/"
[2026-01-20 09:47:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-20 09:47:48] 
[2026-01-20 09:47:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-20 09:47:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-20 09:47:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-20 09:47:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-20 09:47:48] 
[2026-01-20 09:47:48] 2026-01-20 14:47:16,955 | INFO     | ***************************************
[2026-01-20 09:47:48] 2026-01-20 14:47:17,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-20 09:47:48] 2026-01-20 14:47:17,477 | INFO     | sufficient remaining disk space (18569232384 B)
[2026-01-20 09:47:48] 2026-01-20 14:47:17,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-20 09:47:48] 2026-01-20 14:47:17,477 | INFO     | current server update state: UPDATING_FINAL
[2026-01-20 09:47:48] 2026-01-20 14:47:17,477 | INFO     | update_server=False
[2026-01-20 09:47:48] 2026-01-20 14:47:17,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-20 09:47:48] 2026-01-20 14:47:17,899 | INFO     | all data control threads have been joined
[2026-01-20 09:47:48] 2026-01-20 14:47:18,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-20 09:47:48] 2026-01-20 14:47:18,218 | INFO     | aborting loop
[2026-01-20 09:47:48] 2026-01-20 14:47:18,322 | INFO     | all payload control threads have been joined
[2026-01-20 09:47:48] 2026-01-20 14:47:18,483 | INFO     | [job] retrieve thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,486 | INFO     | [payload] validate_pre thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,493 | INFO     | [job] create_data_payload thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,546 | INFO     | [data] copytool_in thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,634 | INFO     | [payload] execute_payloads thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-20 09:47:48] 2026-01-20 14:47:18,806 | INFO     | all job control threads have been joined
[2026-01-20 09:47:48] 2026-01-20 14:47:18,904 | INFO     | [data] control thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:18,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-20 09:47:48] 2026-01-20 14:47:19,166 | INFO     | [job] validate thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,223 | INFO     | [job] job monitor thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,269 | INFO     | [payload] failed_post thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,327 | INFO     | [payload] control thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,763 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,811 | INFO     | [job] control thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:19,897 | INFO     | [payload] validate_post thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:20,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-20 09:47:48] 2026-01-20 14:47:20,737 | INFO     | [data] copytool_out thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:21,426 | INFO     | [job] queue monitor thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:22,981 | INFO     | [data] queue_monitor thread has finished
[2026-01-20 09:47:48] 2026-01-20 14:47:26,273 | INFO     | [monitor] cgroup control has ended
[2026-01-20 09:47:48] 2026-01-20 14:47:27,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533756139328)>', '<ExcThread(monitor, started 140532714030848)>']
[2026-01-20 09:47:48] 2026-01-20 14:47:32,289 | INFO     | all workflow threads have been joined
[2026-01-20 09:47:48] 2026-01-20 14:47:32,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-20 09:47:48] 2026-01-20 14:47:32,290 | INFO     | traces error code: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:32,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-20 09:47:48] 2026-01-20 14:47:47,986 | INFO     | PID=26924 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-20 09:47:48] 2026-01-20 14:47:47,986 | INFO     | found 0 job(s) in 20 queues
[2026-01-20 09:47:48] 2026-01-20 14:47:47,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-20 09:47:48] 2026-01-20 14:47:47,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-20 09:47:48] 2026-01-20 14:47:47,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-20 09:47:48] 2026-01-20 14:47:47,987 | CRITICAL | thread 'MainThread' is not alive
[2026-01-20 09:47:48] 2026-01-20 14:47:47,987 | INFO     | [monitor] control thread has ended
[2026-01-20 09:47:48] 2026-01-20 14:47:48,119 [wrapper] ==== pilot stdout END ====
[2026-01-20 09:47:48] 2026-01-20 14:47:48,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-20 09:47:48] 2026-01-20 14:47:48,129 [wrapper] pilotpid: 26924
[2026-01-20 09:47:48] 2026-01-20 14:47:48,134 [wrapper] Pilot exit status: 0
[2026-01-20 09:47:48] 2026-01-20 14:47:48,151 [wrapper] pandaids: 6968097467
[2026-01-20 09:47:48] 2026-01-20 14:47:48,200 [wrapper] cleanup supervisor_pilot 19773 26925
[2026-01-20 09:47:48] 2026-01-20 14:47:48,204 [wrapper] Test setup, not cleaning
[2026-01-20 09:47:48] 2026-01-20 14:47:48,209 [wrapper] apfmon messages muted
[2026-01-20 09:47:48] 2026-01-20 14:47:48,213 [wrapper] ==== wrapper stdout END ====
[2026-01-20 09:47:48] 2026-01-20 14:47:48,218 [wrapper] ==== wrapper stderr END ====
[2026-01-20 09:47:48]  *** Error codes and diagnostics ***
[2026-01-20 09:47:48]     "exeErrorCode": 0,
[2026-01-20 09:47:48]     "exeErrorDiag": "",
[2026-01-20 09:47:48]     "pilotErrorCode": 0,
[2026-01-20 09:47:48]     "pilotErrorDiag": "",
[2026-01-20 09:47:48]  *** Listing of results directory ***
[2026-01-20 09:47:48] total 458048
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas    579449 Jan 12 20:05 pilot3.tar.gz
[2026-01-20 09:47:48] -rwx------ 1 boincer umatlas     36322 Jan 12 20:24 runpilot2-wrapper.sh
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas      5112 Jan 12 20:24 queuedata.json
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas       100 Jan 20 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-20 09:47:48] -rwxr-xr-x 1 boincer umatlas      7986 Jan 20 06:38 run_atlas
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas       105 Jan 20 06:38 job.xml
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas 173315287 Jan 20 06:38 EVNT.48188671._000010.pool.root.1
[2026-01-20 09:47:48] drwxrwx--x 2 boincer umatlas      4096 Jan 20 06:38 shared
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas    592408 Jan 20 06:38 input.tar.gz
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas     15847 Jan 20 06:38 start_atlas.sh
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas         0 Jan 20 06:38 boinc_lockfile
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas      2624 Jan 20 06:38 pandaJob.out
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas        57 Jan 20 06:38 setup.sh.local
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas   1003861 Jan 20 06:39 agis_schedconf.cvmfs.json
[2026-01-20 09:47:48] drwx------ 5 boincer umatlas      4096 Jan 20 06:39 pilot3
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas      5910 Jan 20 09:38 init_data.xml
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas 287635971 Jan 20 09:46 HITS.48188673._000234.pool.root.1
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas       530 Jan 20 09:46 boinc_task_state.xml
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas        95 Jan 20 09:46 pilot_heartbeat.json
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas      1050 Jan 20 09:47 memory_monitor_summary.json
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas   1516246 Jan 20 09:47 agis_ddmendpoints.agis.ALL.json
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas    518983 Jan 20 09:47 log.48188673._000234.job.log.tgz.1
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas      7837 Jan 20 09:47 heartbeat.json
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas        28 Jan 20 09:47 wrapper_checkpoint.txt
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas      8192 Jan 20 09:47 boinc_mmap_file
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas       815 Jan 20 09:47 pilotlog.txt
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas   1563089 Jan 20 09:47 log.48188673._000234.job.log.1
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas       357 Jan 20 09:47 output.list
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas       620 Jan 20 09:47 runtime_log
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas   2099200 Jan 20 09:47 result.tar.gz
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas      9338 Jan 20 09:47 runtime_log.err
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas       661 Jan 20 09:47 6IcNDmsJiz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVvnKDmoIf5bm.diag
[2026-01-20 09:47:48] -rw-r--r-- 1 boincer umatlas     21076 Jan 20 09:47 stderr.txt
[2026-01-20 09:47:48] HITS file was successfully produced:
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas 287635971 Jan 20 09:46 shared/HITS.pool.root.1
[2026-01-20 09:47:48]  *** Contents of shared directory: ***
[2026-01-20 09:47:48] total 452804
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas 173315287 Jan 20 06:38 ATLAS.root_0
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas    592408 Jan 20 06:38 input.tar.gz
[2026-01-20 09:47:48] -rw-r--r-- 2 boincer umatlas     15847 Jan 20 06:38 start_atlas.sh
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas 287635971 Jan 20 09:46 HITS.pool.root.1
[2026-01-20 09:47:48] -rw------- 1 boincer umatlas   2099200 Jan 20 09:47 result.tar.gz
09:47:50 (23191): run_atlas exited; CPU time 85052.032223
09:47:50 (23191): called boinc_finish(0)

</stderr_txt>
]]>

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