Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:44 (302): wrapper (7.7.26015): starting
04:20:44 (302): wrapper: running run_atlas (--nthreads 12)
[2026-01-20 04:20:44] Arguments: --nthreads 12
[2026-01-20 04:20:44] Threads: 12
[2026-01-20 04:20:44] Checking for CVMFS
[2026-01-20 04:20:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 04:20:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 04:20:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 04:20:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 04:20:44] 2.11.2.0 2991 366648 99964 155340 0 1 17683302 20275201 1 130560 1 154786698 99.947 22386105 16876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-20 04:20:44] CVMFS is ok
[2026-01-20 04:20:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-20 04:20:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-20 04:20:44] Further information can be found at the LHC@home message board.
[2026-01-20 04:20:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 04:20:44] Checking for apptainer binary...
[2026-01-20 04:20:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-20 04:20:44] Running /usr/bin/apptainer --version
[2026-01-20 04:20:45] apptainer version 1.3.2-1.el7
[2026-01-20 04:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 04:20:46] c-205-32.aglt2.org
[2026-01-20 04:20:46] apptainer works
[2026-01-20 04:20:46] Set ATHENA_PROC_NUMBER=12
[2026-01-20 04:20:46] Set ATHENA_CORE_NUMBER=12
[2026-01-20 04:20:46] Starting ATLAS job with PandaID=6966868279
[2026-01-20 04:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:49:07 (17438): wrapper (7.7.26015): starting
12:49:07 (17438): wrapper: running run_atlas (--nthreads 12)
[2026-01-20 12:49:07] Arguments: --nthreads 12
[2026-01-20 12:49:07] Threads: 12
[2026-01-20 12:49:07] This job has been restarted, cleaning up previous attempt
[2026-01-20 12:49:08] Checking for CVMFS
[2026-01-20 12:49:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-20 12:49:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-20 12:49:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-20 12:49:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-20 12:49:08] 2.11.2.0 2991 367156 98024 155355 0 65 19228157 20275200 1 130560 1 154984447 99.944 22733048 16547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-20 12:49:08] CVMFS is ok
[2026-01-20 12:49:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-20 12:49:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-20 12:49:08] Further information can be found at the LHC@home message board.
[2026-01-20 12:49:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-20 12:49:08] Checking for apptainer binary...
[2026-01-20 12:49:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-20 12:49:08] Running /usr/bin/apptainer --version
[2026-01-20 12:49:08] apptainer version 1.3.2-1.el7
[2026-01-20 12:49:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-20 12:49:10] c-205-32.aglt2.org
[2026-01-20 12:49:10] apptainer works
[2026-01-20 12:49:10] Set ATHENA_PROC_NUMBER=12
[2026-01-20 12:49:10] Set ATHENA_CORE_NUMBER=12
[2026-01-20 12:49:10] Starting ATLAS job with PandaID=6966868279
[2026-01-20 12:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-20 22:03:26]  *** The last 200 lines of the pilot log: ***
[2026-01-20 22:03:26] 2026-01-21 03:02:34,443 | INFO     | time since job start (33189s) is within the limit (349056.0s)
[2026-01-20 22:03:26] 2026-01-21 03:02:35,608 | INFO     | monitor loop #2489: job 0:6966868279 is in state 'finished'
[2026-01-20 22:03:26] 2026-01-21 03:02:35,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-20 22:03:26] 2026-01-21 03:02:36,445 | INFO     | time since job start (33191s) is within the limit (349056.0s)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,271 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-20 22:03:26] 2026-01-21 03:02:37,274 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-20 22:03:26] 2026-01-21 03:02:37,275 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966868279/memory_monitor_summary.json (trf name=prmon)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,276 | INFO     | extracted standard info from prmon json
[2026-01-20 22:03:26] 2026-01-21 03:02:37,276 | INFO     | extracted standard memory fields from prmon json
[2026-01-20 22:03:26] 2026-01-21 03:02:37,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-20 22:03:26] 2026-01-21 03:02:37,284 | INFO     | fitting pss+swap vs Time
[2026-01-20 22:03:26] 2026-01-21 03:02:37,285 | INFO     | sum of square deviations: 49919690175.05871
[2026-01-20 22:03:26] 2026-01-21 03:02:37,291 | INFO     | sum of deviations: 798162696011.9406
[2026-01-20 22:03:26] 2026-01-21 03:02:37,291 | INFO     | mean x: 1768947961.5735295
[2026-01-20 22:03:26] 2026-01-21 03:02:37,291 | INFO     | mean y: 4101502.4264705884
[2026-01-20 22:03:26] 2026-01-21 03:02:37,292 | INFO     | intersect: -28279492990.309067
[2026-01-20 22:03:26] 2026-01-21 03:02:37,292 | INFO     | chi2: 6.898899179278172
[2026-01-20 22:03:26] 2026-01-21 03:02:37,293 | INFO     | sum of square deviations: 48555844245.03135
[2026-01-20 22:03:26] 2026-01-21 03:02:37,299 | INFO     | sum of deviations: 1096706970863.1129
[2026-01-20 22:03:26] 2026-01-21 03:02:37,299 | INFO     | mean x: 1768947809.0742116
[2026-01-20 22:03:26] 2026-01-21 03:02:37,299 | INFO     | mean y: 4134888.9721706863
[2026-01-20 22:03:26] 2026-01-21 03:02:37,299 | INFO     | intersect: -39950219184.54882
[2026-01-20 22:03:26] 2026-01-21 03:02:37,300 | INFO     | chi2: 2.8465914388133267
[2026-01-20 22:03:26] 2026-01-21 03:02:37,300 | INFO     | current chi2=2.8465914388133267 (change=58.73846877827307 %)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,300 | INFO     | sum of square deviations: 47217068552.50392
[2026-01-20 22:03:26] 2026-01-21 03:02:37,306 | INFO     | sum of deviations: 1124237763812.2812
[2026-01-20 22:03:26] 2026-01-21 03:02:37,306 | INFO     | mean x: 1768947656.5749063
[2026-01-20 22:03:26] 2026-01-21 03:02:37,306 | INFO     | mean y: 4138000.617977528
[2026-01-20 22:03:26] 2026-01-21 03:02:37,306 | INFO     | intersect: -42114481784.45731
[2026-01-20 22:03:26] 2026-01-21 03:02:37,307 | INFO     | chi2: 2.664112418598935
[2026-01-20 22:03:26] 2026-01-21 03:02:37,307 | INFO     | current chi2=2.664112418598935 (change=6.410439437366633 %)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,307 | INFO     | right removable region: 533
[2026-01-20 22:03:26] 2026-01-21 03:02:37,308 | INFO     | sum of square deviations: 48555819845.03137
[2026-01-20 22:03:26] 2026-01-21 03:02:37,314 | INFO     | sum of deviations: 571667864998.0596
[2026-01-20 22:03:26] 2026-01-21 03:02:37,314 | INFO     | mean x: 1768948114.0742116
[2026-01-20 22:03:26] 2026-01-21 03:02:37,314 | INFO     | mean y: 4126777.19851577
[2026-01-20 22:03:26] 2026-01-21 03:02:37,314 | INFO     | intersect: -20822435206.3621
[2026-01-20 22:03:26] 2026-01-21 03:02:37,315 | INFO     | chi2: 4.456205406246367
[2026-01-20 22:03:26] 2026-01-21 03:02:37,315 | INFO     | current chi2=4.456205406246367 (change=35.40700783639199 %)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,315 | INFO     | sum of square deviations: 47217118020.93627
[2026-01-20 22:03:26] 2026-01-21 03:02:37,321 | INFO     | sum of deviations: 523800398238.3481
[2026-01-20 22:03:26] 2026-01-21 03:02:37,321 | INFO     | mean x: 1768948266.5692885
[2026-01-20 22:03:26] 2026-01-21 03:02:37,322 | INFO     | mean y: 4132226.679775281
[2026-01-20 22:03:26] 2026-01-21 03:02:37,322 | INFO     | intersect: -19619594195.614384
[2026-01-20 22:03:26] 2026-01-21 03:02:37,322 | INFO     | chi2: 4.4192158025262405
[2026-01-20 22:03:26] 2026-01-21 03:02:37,322 | INFO     | current chi2=4.4192158025262405 (change=0.8300695400682676 %)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,322 | INFO     | left removable region: 20
[2026-01-20 22:03:26] 2026-01-21 03:02:37,323 | INFO     | sum of square deviations: 41862824443.74653
[2026-01-20 22:03:26] 2026-01-21 03:02:37,328 | INFO     | sum of deviations: 779413412443.292
[2026-01-20 22:03:26] 2026-01-21 03:02:37,329 | INFO     | mean x: 1768948236.0662768
[2026-01-20 22:03:26] 2026-01-21 03:02:37,329 | INFO     | mean y: 4177674.4619883043
[2026-01-20 22:03:26] 2026-01-21 03:02:37,329 | INFO     | intersect: -32930580059.35154
[2026-01-20 22:03:26] 2026-01-21 03:02:37,329 | INFO     | chi2: 0.12109526902360153
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | current memory leak: 18.62 B/s (using 513 data points, chi2=0.12)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | could have reported an average CPU frequency of 2440 MHz (22 samples)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | ..............................
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | . Timing measurements:
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | . get job = 0 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,330 | INFO     | . initial setup = 2 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | . payload setup = 13 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | . stage-in = 0 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | . payload execution = 33144 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | . stage-out = 3 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | . log creation = 0 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,331 | INFO     | ..............................
[2026-01-20 22:03:26] 2026-01-21 03:02:37,413 | INFO     | 
[2026-01-20 22:03:26] 2026-01-21 03:02:37,413 | INFO     | job summary report
[2026-01-20 22:03:26] 2026-01-21 03:02:37,413 | INFO     | --------------------------------------------------
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | PanDA job id: 6966868279
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | task id: 48187943
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | errors: (none)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | pilot state: finished 
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | transexitcode: 0
[2026-01-20 22:03:26] 2026-01-21 03:02:37,414 | INFO     | exeerrorcode: 0
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | exeerrordiag: 
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | exitcode: 0
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | exitmsg: OK
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | cpuconsumptiontime: 369445 s
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | nevents: 2050
[2026-01-20 22:03:26] 2026-01-21 03:02:37,415 | INFO     | neventsw: 0
[2026-01-20 22:03:26] 2026-01-21 03:02:37,416 | INFO     | pid: 28544
[2026-01-20 22:03:26] 2026-01-21 03:02:37,416 | INFO     | pgrp: 28544
[2026-01-20 22:03:26] 2026-01-21 03:02:37,416 | INFO     | corecount: 12
[2026-01-20 22:03:26] 2026-01-21 03:02:37,416 | INFO     | event service: False
[2026-01-20 22:03:26] 2026-01-21 03:02:37,416 | INFO     | sizes: {0: 2286985, 5: 2287279, 11: 2287335, 33161: 2349129, 33162: 2349128, 33166: 2357070, 33168: 2357254, 33177: 2357500}
[2026-01-20 22:03:26] 2026-01-21 03:02:37,417 | INFO     | --------------------------------------------------
[2026-01-20 22:03:26] 2026-01-21 03:02:37,417 | INFO     | 
[2026-01-20 22:03:26] 2026-01-21 03:02:37,417 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-20 22:03:26] 2026-01-21 03:02:37,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,444 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-20 22:03:26] 2026-01-21 03:02:37,444 | INFO     | job 6966868279 has completed (purged errors)
[2026-01-20 22:03:26] 2026-01-21 03:02:37,444 | INFO     | overall cleanup function is called
[2026-01-20 22:03:26] 2026-01-21 03:02:38,461 | INFO     | --- collectZombieJob: --- 10, [28544]
[2026-01-20 22:03:26] 2026-01-21 03:02:38,461 | INFO     | zombie collector waiting for pid 28544
[2026-01-20 22:03:26] 2026-01-21 03:02:38,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-20 22:03:26] 2026-01-21 03:02:38,462 | INFO     | collected zombie processes
[2026-01-20 22:03:26] 2026-01-21 03:02:38,462 | INFO     | will attempt to kill all subprocesses of pid=28544
[2026-01-20 22:03:26] 2026-01-21 03:02:38,552 | INFO     | process IDs to be killed: [28544] (in reverse order)
[2026-01-20 22:03:26] 2026-01-21 03:02:38,601 | WARNING  | found no corresponding commands to process id(s)
[2026-01-20 22:03:26] 2026-01-21 03:02:38,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-20 22:03:26] 2026-01-21 03:02:38,605 | INFO     | did not find any defunct processes belonging to 28544
[2026-01-20 22:03:26] 2026-01-21 03:02:38,608 | INFO     | did not find any defunct processes belonging to 28544
[2026-01-20 22:03:26] 2026-01-21 03:02:38,609 | INFO     | ready for new job
[2026-01-20 22:03:26] 2026-01-21 03:02:38,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-20 22:03:26] 2026-01-21 03:02:38,611 | INFO     | ***************************************
[2026-01-20 22:03:26] 2026-01-21 03:02:38,611 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-20 22:03:26] 2026-01-21 03:02:38,611 | INFO     | ***************************************
[2026-01-20 22:03:26] 2026-01-21 03:02:38,611 | INFO     | 
[2026-01-20 22:03:26] 2026-01-21 03:02:38,612 | INFO     | architecture information:
[2026-01-20 22:03:26] 2026-01-21 03:02:38,613 | INFO     | executing command: cat /etc/os-release
[2026-01-20 22:03:26] 2026-01-21 03:02:38,627 | INFO     | cat /etc/os-release:
[2026-01-20 22:03:26] NAME="CentOS Linux"
[2026-01-20 22:03:26] VERSION="7 (Core)"
[2026-01-20 22:03:26] ID="centos"
[2026-01-20 22:03:26] ID_LIKE="rhel fedora"
[2026-01-20 22:03:26] VERSION_ID="7"
[2026-01-20 22:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-20 22:03:26] ANSI_COLOR="0;31"
[2026-01-20 22:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-20 22:03:26] HOME_URL="https://www.centos.org/"
[2026-01-20 22:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-20 22:03:26] 
[2026-01-20 22:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-20 22:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-20 22:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-20 22:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-20 22:03:26] 
[2026-01-20 22:03:26] 2026-01-21 03:02:38,627 | INFO     | ***************************************
[2026-01-20 22:03:26] 2026-01-21 03:02:39,130 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-20 22:03:26] 2026-01-21 03:02:39,146 | INFO     | sufficient remaining disk space (27245150208 B)
[2026-01-20 22:03:26] 2026-01-21 03:02:39,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-20 22:03:26] 2026-01-21 03:02:39,147 | INFO     | current server update state: UPDATING_FINAL
[2026-01-20 22:03:26] 2026-01-21 03:02:39,147 | INFO     | update_server=False
[2026-01-20 22:03:26] 2026-01-21 03:02:39,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-20 22:03:26] 2026-01-21 03:02:39,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-20 22:03:26] 2026-01-21 03:02:39,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-20 22:03:26] 2026-01-21 03:02:39,148 | INFO     | aborting loop
[2026-01-20 22:03:26] 2026-01-21 03:02:39,535 | INFO     | all job control threads have been joined
[2026-01-20 22:03:26] 2026-01-21 03:02:39,825 | INFO     | all payload control threads have been joined
[2026-01-20 22:03:26] 2026-01-21 03:02:39,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-20 22:03:26] 2026-01-21 03:02:40,153 | INFO     | [job] retrieve thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:40,153 | INFO     | [job] queue monitor thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:40,154 | INFO     | [job] job monitor thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:40,209 | INFO     | all data control threads have been joined
[2026-01-20 22:03:26] 2026-01-21 03:02:40,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-20 22:03:26] 2026-01-21 03:02:40,540 | INFO     | [job] control thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:40,751 | INFO     | [payload] failed_post thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:40,830 | INFO     | [payload] control thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,045 | INFO     | [job] create_data_payload thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,215 | INFO     | [data] control thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,220 | INFO     | [payload] validate_post thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,280 | INFO     | [payload] validate_pre thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,369 | INFO     | [job] validate thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,372 | INFO     | [payload] execute_payloads thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:41,379 | INFO     | [data] copytool_in thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:42,332 | INFO     | [data] copytool_out thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:43,876 | INFO     | [data] queue_monitor thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:02:49,305 | INFO     | job.realtimelogging is not enabled
[2026-01-20 22:03:26] 2026-01-21 03:02:50,311 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-20 22:03:26] 2026-01-21 03:03:09,634 | INFO     | PID=21501 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-20 22:03:26] 2026-01-21 03:03:09,635 | INFO     | found 0 job(s) in 20 queues
[2026-01-20 22:03:26] 2026-01-21 03:03:09,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-20 22:03:26] 2026-01-21 03:03:09,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-20 22:03:26] 2026-01-21 03:03:19,538 | INFO     | [monitor] cgroup control has ended
[2026-01-20 22:03:26] 2026-01-21 03:03:20,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076605781824)>', '<ExcThread(monitor, started 140075618772736)>']
[2026-01-20 22:03:26] 2026-01-21 03:03:21,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-20 22:03:26] 2026-01-21 03:03:21,685 | INFO     | [monitor] control thread has ended
[2026-01-20 22:03:26] 2026-01-21 03:03:26,011 | INFO     | all workflow threads have been joined
[2026-01-20 22:03:26] 2026-01-21 03:03:26,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-20 22:03:26] 2026-01-21 03:03:26,011 | INFO     | traces error code: 0
[2026-01-20 22:03:26] 2026-01-21 03:03:26,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-20 22:03:26] 2026-01-21 03:03:26,090 [wrapper] ==== pilot stdout END ====
[2026-01-20 22:03:26] 2026-01-21 03:03:26,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-20 22:03:26] 2026-01-21 03:03:26,097 [wrapper] pilotpid: 21501
[2026-01-20 22:03:26] 2026-01-21 03:03:26,100 [wrapper] Pilot exit status: 0
[2026-01-20 22:03:26] 2026-01-21 03:03:26,112 [wrapper] pandaids: 6966868279 6966868279
[2026-01-20 22:03:26] 2026-01-21 03:03:26,156 [wrapper] cleanup supervisor_pilot 32231 21502
[2026-01-20 22:03:26] 2026-01-21 03:03:26,160 [wrapper] Test setup, not cleaning
[2026-01-20 22:03:26] 2026-01-21 03:03:26,164 [wrapper] apfmon messages muted
[2026-01-20 22:03:26] 2026-01-21 03:03:26,167 [wrapper] ==== wrapper stdout END ====
[2026-01-20 22:03:26] 2026-01-21 03:03:26,171 [wrapper] ==== wrapper stderr END ====
[2026-01-20 22:03:26]  *** Error codes and diagnostics ***
[2026-01-20 22:03:26]     "exeErrorCode": 0,
[2026-01-20 22:03:26]     "exeErrorDiag": "",
[2026-01-20 22:03:26]     "pilotErrorCode": 0,
[2026-01-20 22:03:26]     "pilotErrorDiag": "",
[2026-01-20 22:03:26]  *** Listing of results directory ***
[2026-01-20 22:03:26] total 2430484
[2026-01-20 22:03:26] drwx------ 5 boincer umatlas       4096 Dec  3 09:30 pilot3
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-20 22:03:26] -rwx------ 1 boincer umatlas      36322 Jan 12 04:02 runpilot2-wrapper.sh
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 04:04 queuedata.json
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas        100 Jan 20 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-20 22:03:26] -rwxr-xr-x 1 boincer umatlas       7986 Jan 20 04:20 run_atlas
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas        105 Jan 20 04:20 job.xml
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  320744082 Jan 20 04:20 EVNT.48118027._000384.pool.root.1
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  320744082 Jan 20 04:20 ATLAS.root_0
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  323636318 Jan 20 04:20 EVNT.48118027._000385.pool.root.1
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  323636318 Jan 20 04:20 ATLAS.root_1
[2026-01-20 22:03:26] -rw-r--r-- 2 boincer umatlas      15897 Jan 20 04:20 start_atlas.sh
[2026-01-20 22:03:26] drwxrwx--x 2 boincer umatlas       4096 Jan 20 04:20 shared
[2026-01-20 22:03:26] -rw-r--r-- 2 boincer umatlas     592702 Jan 20 04:20 input.tar.gz
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas          0 Jan 20 04:20 boinc_lockfile
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas       3436 Jan 20 12:49 pandaJob.out
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas         57 Jan 20 12:49 setup.sh.local
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    1003869 Jan 20 12:49 agis_schedconf.cvmfs.json
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas        532 Jan 20 21:53 boinc_task_state.xml
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas       5955 Jan 20 22:01 init_data.xml
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas 1181451253 Jan 20 22:01 HITS.48187943._001874.pool.root.1
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas       1064 Jan 20 22:02 memory_monitor_summary.json
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    1516246 Jan 20 22:02 agis_ddmendpoints.agis.ALL.json
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    2667337 Jan 20 22:02 log.48187943._001874.job.log.tgz.1
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas      29550 Jan 20 22:02 heartbeat.json
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas         96 Jan 20 22:03 pilot_heartbeat.json
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas         29 Jan 20 22:03 wrapper_checkpoint.txt
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas       8192 Jan 20 22:03 boinc_mmap_file
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas       4818 Jan 20 22:03 pilotlog.txt
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    4633036 Jan 20 22:03 log.48187943._001874.job.log.1
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas        353 Jan 20 22:03 output.list
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas        620 Jan 20 22:03 runtime_log
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    7342080 Jan 20 22:03 result.tar.gz
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas       9567 Jan 20 22:03 runtime_log.err
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas        797 Jan 20 22:03 bvGMDmzzSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4QnKDm8LutYn.diag
[2026-01-20 22:03:26] -rw-r--r-- 1 boincer umatlas      23349 Jan 20 22:03 stderr.txt
[2026-01-20 22:03:26] HITS file was successfully produced:
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas 1181451253 Jan 20 22:01 shared/HITS.pool.root.1
[2026-01-20 22:03:26]  *** Contents of shared directory: ***
[2026-01-20 22:03:26] total 1790824
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  320744082 Jan 20 04:20 ATLAS.root_0
[2026-01-20 22:03:26] -rw-r--r-- 3 boincer umatlas  323636318 Jan 20 04:20 ATLAS.root_1
[2026-01-20 22:03:26] -rw-r--r-- 2 boincer umatlas      15897 Jan 20 04:20 start_atlas.sh
[2026-01-20 22:03:26] -rw-r--r-- 2 boincer umatlas     592702 Jan 20 04:20 input.tar.gz
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas 1181451253 Jan 20 22:01 HITS.pool.root.1
[2026-01-20 22:03:26] -rw------- 1 boincer umatlas    7342080 Jan 20 22:03 result.tar.gz
22:03:27 (17438): run_atlas exited; CPU time 358419.944587
22:03:27 (17438): called boinc_finish(0)

</stderr_txt>
]]>

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