Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-20 20:36:46 (9056): vboxwrapper version 26210
2026-01-20 20:36:46 (9056): BOINC client version: 8.2.8
2026-01-20 20:36:47 (9056): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-20 20:36:47 (9056): Successfully copied 'init_data.xml' to the shared directory.
2026-01-20 20:36:47 (9056): Create VM. (boinc_4ec98b2dd14f4728, slot#0)
2026-01-20 20:36:48 (9056): Setting Memory Size for VM. (4800MB)
2026-01-20 20:36:48 (9056): Setting CPU Count for VM. (8)
2026-01-20 20:36:48 (9056): Setting Chipset Options for VM.
2026-01-20 20:36:48 (9056): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-20 20:36:49 (9056): Setting Boot Options for VM.
2026-01-20 20:36:49 (9056): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-20 20:36:49 (9056): Enabling VM Network Access.
2026-01-20 20:36:50 (9056): Disabling USB Support for VM.
2026-01-20 20:36:50 (9056): Disabling COM Port Support for VM.
2026-01-20 20:36:50 (9056): Disabling LPT Port Support for VM.
2026-01-20 20:36:50 (9056): Disabling Audio Support for VM.
2026-01-20 20:36:51 (9056): Disabling Clipboard Support for VM.
2026-01-20 20:36:51 (9056): Disabling Drag and Drop Support for VM.
2026-01-20 20:36:51 (9056): Adding storage controller(s) to VM.
2026-01-20 20:36:51 (9056): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-20 20:36:52 (9056): Adding VirtualBox Guest Additions to VM.
2026-01-20 20:36:52 (9056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-20 20:36:52 (9056): forwarding host port 62865 to guest port 80
2026-01-20 20:36:53 (9056): Enabling remote desktop for VM.
2026-01-20 20:36:53 (9056): Enabling shared directory for VM.
2026-01-20 20:36:54 (9056): Starting VM using VBoxManage interface. (boinc_4ec98b2dd14f4728, slot#0)
2026-01-20 20:36:59 (9056): Successfully started VM. (PID = '11256')
2026-01-20 20:36:59 (9056): Reporting VM Process ID to BOINC.
2026-01-20 20:36:59 (9056): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-20 20:36:59 (9056): Guest Log: CPUID EDX: 0x178bfbff
2026-01-20 20:36:59 (9056): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-20 20:36:59 (9056): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-20 20:36:59 (9056): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-20 20:36:59 (9056): Detected: Web Application Enabled (http://localhost:62865)
2026-01-20 20:36:59 (9056): Detected: Remote Desktop Enabled (localhost:62866)
2026-01-20 20:36:59 (9056): Preference change detected
2026-01-20 20:36:59 (9056): Setting CPU throttle for VM. (97%)
2026-01-20 20:36:59 (9056): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-20 20:37:01 (9056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-20 20:37:01 (9056): Guest Log: BIOS: Booting from Hard Disk...
2026-01-20 20:37:04 (9056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-20 20:37:04 (9056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-20 20:37:04 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-20 20:37:08 (9056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-20 20:37:08 (9056): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-20 20:37:13 (9056): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000080 main     Log opened 2026-01-20T20:37:11.215386000Z
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000146 main     OS Product: Linux
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000166 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000181 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000196 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000196 main     Process ID: 1370
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000197 main     Package type: LINUX_64BITS_GENERIC
2026-01-20 20:37:13 (9056): Guest Log: 00:00:00.000738 main     5.2.32 r132073 started. Verbose level = 0
2026-01-20 20:37:13 (9056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-20 20:37:13 (9056): Guest Log: [INFO] Mounting shared directory
2026-01-20 20:37:13 (9056): Guest Log: [INFO] Checking for init_data.xml
2026-01-20 20:37:20 (9056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-20 20:37:20 (9056): Guest Log: [INFO] Detected branch: prod
2026-01-20 20:37:20 (9056): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-20 20:37:20 (9056): Guest Log: Copying input files
2026-01-20 20:37:21 (9056): Guest Log: Copied input files into RunAtlas.
2026-01-20 20:37:21 (9056): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-20 20:37:21 (9056): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-20 20:37:21 (9056): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-20 20:37:21 (9056): Guest Log: Further information can be found at the LHC@home message board.
2026-01-20 20:37:23 (9056): Guest Log: 00:00:10.004193 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 504 604 000ns (GuestNow=1 768 937 842 712 429 000 ns GuestLast=1 768 941 431 217 033 000 ns fSetTimeLastLoop=true )
2026-01-20 20:37:29 (9056): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-20 20:37:29 (9056): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-20 20:37:29 (9056): Guest Log: 2.6.3.0 1647 0 32196 155358 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-20 20:37:30 (9056): Guest Log: copied the webapp to /var/www
2026-01-20 20:37:30 (9056): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-20 20:37:30 (9056): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-20 20:37:30 (9056): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-20 20:37:30 (9056): Guest Log:  *** Starting ATLAS job. (PandaID=6966861912 taskID=48187943) ***
2026-01-20 22:17:01 (9056): Status Report: Elapsed Time: '6000.000000'
2026-01-20 22:17:01 (9056): Status Report: CPU Time: '44729.625000'
2026-01-20 23:57:03 (9056): Status Report: Elapsed Time: '12000.000000'
2026-01-20 23:57:03 (9056): Status Report: CPU Time: '92467.406250'
2026-01-21 01:37:06 (9056): Status Report: Elapsed Time: '18000.000000'
2026-01-21 01:37:06 (9056): Status Report: CPU Time: '140298.515625'
2026-01-21 03:17:08 (9056): Status Report: Elapsed Time: '24000.000000'
2026-01-21 03:17:08 (9056): Status Report: CPU Time: '188123.031250'
2026-01-21 04:57:10 (9056): Status Report: Elapsed Time: '30000.000000'
2026-01-21 04:57:10 (9056): Status Report: CPU Time: '235956.468750'
2026-01-21 06:29:10 (9056): Guest Log:  *** Job finished ***
2026-01-21 06:29:10 (9056): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:49,659 | INFO     | all workflow threads have been joined
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:49,659 | INFO     | end of generic workflow (traces error code: 0)
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:49,659 | INFO     | traces error code: 0
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:49,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | INFO     | PID=6067 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | INFO     | found 0 job(s) in 20 queues
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,179 | INFO     | [monitor] control thread has ended
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,264 [wrapper] ==== pilot stdout END ====
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,268 [wrapper] ==== wrapper stdout RESUME ====
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,272 [wrapper] pilotpid: 6067
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,276 [wrapper] Pilot exit status: 0
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,289 [wrapper] pandaids: 6966861912
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,310 [wrapper] cleanup supervisor_pilot 18617 6068
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,314 [wrapper] Test setup, not cleaning
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,317 [wrapper] apfmon messages muted
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,320 [wrapper] ==== wrapper stdout END ====
2026-01-21 06:29:10 (9056): Guest Log: 2026-01-21 05:28:56,324 [wrapper] ==== wrapper stderr END ====
2026-01-21 06:29:10 (9056): Guest Log:  *** Error codes and diagnostics ***
2026-01-21 06:29:10 (9056): Guest Log:     "exeErrorCode": 0,
2026-01-21 06:29:10 (9056): Guest Log:     "exeErrorDiag": "",
2026-01-21 06:29:10 (9056): Guest Log:     "pilotErrorCode": 0,
2026-01-21 06:29:10 (9056): Guest Log:     "pilotErrorDiag": "",
2026-01-21 06:29:10 (9056): Guest Log:  *** Listing of results directory ***
2026-01-21 06:29:10 (9056): Guest Log: total 1180924
2026-01-21 06:29:10 (9056): Guest Log: -rw-r--r--. 1 atlas atlas     579449 Jan 12 08:50 pilot3.tar.gz
2026-01-21 06:29:10 (9056): Guest Log: -rw-r--r--. 1 atlas atlas       5112 Jan 12 08:58 queuedata.json
2026-01-21 06:29:10 (9056): Guest Log: -rwx------. 1 atlas atlas      36322 Jan 12 08:59 runpilot2-wrapper.sh
2026-01-21 06:29:10 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas       8549 Jan 20 19:37 init_data.xml
2026-01-21 06:29:10 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas      15847 Jan 20 19:37 start_atlas.sh
2026-01-21 06:29:10 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas     592612 Jan 20 19:37 input.tar.gz
2026-01-21 06:29:10 (9056): Guest Log: lrwxrwxrwx. 1 atlas atlas         20 Jan 20 19:37 EVNT.48118027._000260.pool.root.1 -> /data/./ATLAS.root_0
2026-01-21 06:29:10 (9056): Guest Log: -rw-r--r--. 1 atlas atlas       2897 Jan 20 19:37 pandaJob.out
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas    1003869 Jan 20 19:37 agis_schedconf.cvmfs.json
2026-01-21 06:29:10 (9056): Guest Log: drwx------. 5 atlas atlas       4096 Jan 20 19:38 pilot3
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas 1191665994 Jan 21 05:27 HITS.48187943._001268.pool.root.1
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas       1037 Jan 21 05:28 memory_monitor_summary.json
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas    1516246 Jan 21 05:28 agis_ddmendpoints.agis.ALL.json
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas    2173360 Jan 21 05:28 log.48187943._001268.job.log.tgz.1
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas      27582 Jan 21 05:28 heartbeat.json
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas         95 Jan 21 05:28 pilot_heartbeat.json
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas        744 Jan 21 05:28 pilotlog.txt
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas    4677090 Jan 21 05:28 log.48187943._001268.job.log.1
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas        353 Jan 21 05:28 output.list
2026-01-21 06:29:10 (9056): Guest Log: -rw-r--r--. 1 atlas atlas        620 Jan 21 05:28 runtime_log
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas    6891520 Jan 21 05:28 result.tar.gz
2026-01-21 06:29:10 (9056): Guest Log: -rw-r--r--. 1 atlas atlas       8738 Jan 21 05:28 runtime_log.err
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas        657 Jan 21 05:28 NRRNDm3wSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfLnKDmDg7rzm.diag
2026-01-21 06:29:10 (9056): Guest Log: Looking for outputfile HITS.48187943._001268.pool.root.1
2026-01-21 06:29:10 (9056): Guest Log: HITS file was successfully produced
2026-01-21 06:29:10 (9056): Guest Log: -rw-------. 1 atlas atlas 1191665994 Jan 21 05:27 /home/atlas/RunAtlas/HITS.48187943._001268.pool.root.1
2026-01-21 06:29:13 (9056): Guest Log: Successfully finished the ATLAS job!
2026-01-21 06:29:13 (9056): Guest Log: Copying the results back to the shared directory!
2026-01-21 06:29:13 (9056): Guest Log:  *** Contents of shared directory: ***
2026-01-21 06:29:13 (9056): Guest Log: total 1486652
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root  323144413 Jan 20 19:36 ATLAS.root_0
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root 1191665994 Jan 21  2026 HITS.pool.root.1
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root       8549 Jan 20 19:36 init_data.xml
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root     592612 Jan 20 09:07 input.tar.gz
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root    6891520 Jan 21  2026 result.tar.gz
2026-01-21 06:29:13 (9056): Guest Log: -rwxrwxrwx. 1 root root      15847 Jan 20 09:07 start_atlas.sh
2026-01-21 06:29:13 (9056): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-21 06:29:13 (9056): VM Completion File Detected.
2026-01-21 06:29:13 (9056): Powering off VM.
2026-01-21 06:29:14 (9056): Successfully stopped VM.
2026-01-21 06:29:14 (9056): Deregistering VM. (boinc_4ec98b2dd14f4728, slot#0)
2026-01-21 06:29:14 (9056): Removing network bandwidth throttle group from VM.
2026-01-21 06:29:14 (9056): Removing VM from VirtualBox.
2026-01-21 06:29:19 (9056): called boinc_finish(0)

</stderr_txt>
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