Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:22 (32525): wrapper (7.7.26015): starting
21:22:22 (32525): wrapper: running run_atlas (--nthreads 8)
[2026-01-19 21:22:22] Arguments: --nthreads 8
[2026-01-19 21:22:22] Threads: 8
[2026-01-19 21:22:22] Checking for CVMFS
[2026-01-19 21:22:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-19 21:22:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-19 21:22:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-19 21:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-19 21:22:23] 2.11.2.0 2989 151896 116224 155329 3 1 18380478 20275201 1 130560 0 40294226 99.845 9510137 28130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-19 21:22:23] CVMFS is ok
[2026-01-19 21:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-19 21:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-19 21:22:23] Further information can be found at the LHC@home message board.
[2026-01-19 21:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-19 21:22:23] Checking for apptainer binary...
[2026-01-19 21:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-19 21:22:23] Running /usr/bin/apptainer --version
[2026-01-19 21:22:23] apptainer version 1.3.2-1.el7
[2026-01-19 21:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-19 21:22:25] c-204-24.aglt2.org
[2026-01-19 21:22:25] apptainer works
[2026-01-19 21:22:25] Set ATHENA_PROC_NUMBER=8
[2026-01-19 21:22:25] Set ATHENA_CORE_NUMBER=8
[2026-01-19 21:22:25] Starting ATLAS job with PandaID=6969484842
[2026-01-19 21:22:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-19 22:43:57]  *** The last 200 lines of the pilot log: ***
[2026-01-19 22:43:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969484842/log.48215263._026028.job.log.tgz.1
[2026-01-19 22:43:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/50/log.48215263._026028.job.log.tgz.1
[2026-01-19 22:43:57]  workdir=None
[2026-01-19 22:43:57] ]
[2026-01-19 22:43:57] 2026-01-20 03:42:43,503 | INFO     | transferring file log.48215263._026028.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969484842/log.48215263._026028.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-19 22:43:57] 2026-01-20 03:42:43,504 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969484842/log.48215263._026028.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._026028.job
[2026-01-19 22:43:57] 2026-01-20 03:42:43,531 | INFO     | adding to output.list: log.48215263._026028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/50/log.48215263._026028.job.log.tg
[2026-01-19 22:43:57] 2026-01-20 03:42:43,532 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-19 22:43:57] 2026-01-20 03:42:43,533 | INFO     | summary of transferred files:
[2026-01-19 22:43:57] 2026-01-20 03:42:43,533 | INFO     |  -- lfn=log.48215263._026028.job.log.tgz.1, status_code=0, status=transferred
[2026-01-19 22:43:57] 2026-01-20 03:42:43,533 | INFO     | stage-out finished correctly
[2026-01-19 22:43:57] 2026-01-20 03:42:43,933 | INFO     | monitor loop #358: job 0:6969484842 is in state 'finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:43,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 22:43:57] 2026-01-20 03:42:44,690 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-19 22:43:57] 2026-01-20 03:42:44,943 | INFO     | time since job start (4801s) is within the limit (349056.0s)
[2026-01-19 22:43:57] 2026-01-20 03:42:46,437 | INFO     | monitor loop #359: job 0:6969484842 is in state 'finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:46,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 22:43:57] 2026-01-20 03:42:46,944 | INFO     | time since job start (4803s) is within the limit (349056.0s)
[2026-01-19 22:43:57] 2026-01-20 03:42:47,127 | INFO     | job 6969484842 has state=finished
[2026-01-19 22:43:57] 2026-01-20 03:42:47,127 | INFO     | preparing for final server update for job 6969484842 in state='finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:47,128 | INFO     | this job has now completed (state=finished)
[2026-01-19 22:43:57] 2026-01-20 03:42:47,128 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-19 22:43:57] 2026-01-20 03:42:47,128 | INFO     | log transfer has been attempted: DONE
[2026-01-19 22:43:57] 2026-01-20 03:42:47,129 | INFO     | job 6969484842 has finished - writing final server update
[2026-01-19 22:43:57] 2026-01-20 03:42:47,129 | INFO     | total number of processed events: 400 (read)
[2026-01-19 22:43:57] 2026-01-20 03:42:47,130 | INFO     | executing command: lscpu
[2026-01-19 22:43:57] 2026-01-20 03:42:47,166 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-19 22:43:57] 2026-01-20 03:42:48,940 | INFO     | monitor loop #360: job 0:6969484842 is in state 'finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:48,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 22:43:57] 2026-01-20 03:42:48,949 | INFO     | time since job start (4805s) is within the limit (349056.0s)
[2026-01-19 22:43:57] 2026-01-20 03:42:50,956 | INFO     | time since job start (4807s) is within the limit (349056.0s)
[2026-01-19 22:43:57] 2026-01-20 03:42:51,444 | INFO     | monitor loop #361: job 0:6969484842 is in state 'finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:51,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 22:43:57] 2026-01-20 03:42:52,961 | INFO     | time since job start (4809s) is within the limit (349056.0s)
[2026-01-19 22:43:57] 2026-01-20 03:42:53,947 | INFO     | monitor loop #362: job 0:6969484842 is in state 'finished'
[2026-01-19 22:43:57] 2026-01-20 03:42:53,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,354 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-19 22:43:57] 2026-01-20 03:42:54,358 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-19 22:43:57] 2026-01-20 03:42:54,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969484842/memory_monitor_summary.json (trf name=prmon)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,360 | INFO     | extracted standard info from prmon json
[2026-01-19 22:43:57] 2026-01-20 03:42:54,361 | INFO     | extracted standard memory fields from prmon json
[2026-01-19 22:43:57] 2026-01-20 03:42:54,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-19 22:43:57] 2026-01-20 03:42:54,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-19 22:43:57] 2026-01-20 03:42:54,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-19 22:43:57] 2026-01-20 03:42:54,363 | INFO     | fitting pss+swap vs Time
[2026-01-19 22:43:57] 2026-01-20 03:42:54,363 | INFO     | sum of square deviations: 115715658.0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | sum of deviations: -9519320352.0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | mean x: 1768878265.5
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | mean y: 2676183.222222222
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | intersect: 145519014801.671
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | chi2: 0.0838205484231645
[2026-01-19 22:43:57] 2026-01-20 03:42:54,364 | INFO     | current memory leak: -82.26 B/s (using 72 data points, chi2=0.08)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | could have reported an average CPU frequency of 1887 MHz (6 samples)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | ..............................
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | . Timing measurements:
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | . get job = 0 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | . initial setup = 2 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,365 | INFO     | . payload setup = 8 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,366 | INFO     | . stage-in = 0 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,366 | INFO     | . payload execution = 4768 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,366 | INFO     | . stage-out = 0 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,366 | INFO     | . log creation = 0 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,366 | INFO     | ..............................
[2026-01-19 22:43:57] 2026-01-20 03:42:54,498 | INFO     | 
[2026-01-19 22:43:57] 2026-01-20 03:42:54,498 | INFO     | job summary report
[2026-01-19 22:43:57] 2026-01-20 03:42:54,498 | INFO     | --------------------------------------------------
[2026-01-19 22:43:57] 2026-01-20 03:42:54,498 | INFO     | PanDA job id: 6969484842
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | task id: 48215263
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | errors: (none)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | pilot state: finished 
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | transexitcode: 0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,499 | INFO     | exeerrorcode: 0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | exeerrordiag: 
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | exitcode: 0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | exitmsg: OK
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | cpuconsumptiontime: 34998 s
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | nevents: 400
[2026-01-19 22:43:57] 2026-01-20 03:42:54,500 | INFO     | neventsw: 0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | pid: 10407
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | pgrp: 10407
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | corecount: 8
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | event service: False
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | sizes: {0: 2283951, 1: 2283951, 6: 2284241, 11: 2284269, 4781: 2310456, 4783: 2319454, 4784: 2319638, 4794: 2319832}
[2026-01-19 22:43:57] 2026-01-20 03:42:54,501 | INFO     | --------------------------------------------------
[2026-01-19 22:43:57] 2026-01-20 03:42:54,502 | INFO     | 
[2026-01-19 22:43:57] 2026-01-20 03:42:54,502 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-19 22:43:57] 2026-01-20 03:42:54,530 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,530 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,530 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,531 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,533 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-19 22:43:57] 2026-01-20 03:42:54,534 | INFO     | job 6969484842 has completed (purged errors)
[2026-01-19 22:43:57] 2026-01-20 03:42:54,534 | INFO     | overall cleanup function is called
[2026-01-19 22:43:57] 2026-01-20 03:42:55,542 | INFO     | --- collectZombieJob: --- 10, [10407]
[2026-01-19 22:43:57] 2026-01-20 03:42:55,543 | INFO     | zombie collector waiting for pid 10407
[2026-01-19 22:43:57] 2026-01-20 03:42:55,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-19 22:43:57] 2026-01-20 03:42:55,543 | INFO     | collected zombie processes
[2026-01-19 22:43:57] 2026-01-20 03:42:55,543 | INFO     | will attempt to kill all subprocesses of pid=10407
[2026-01-19 22:43:57] 2026-01-20 03:42:55,635 | INFO     | process IDs to be killed: [10407] (in reverse order)
[2026-01-19 22:43:57] 2026-01-20 03:42:55,694 | WARNING  | found no corresponding commands to process id(s)
[2026-01-19 22:43:57] 2026-01-20 03:42:55,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-19 22:43:57] 2026-01-20 03:42:55,699 | INFO     | did not find any defunct processes belonging to 10407
[2026-01-19 22:43:57] 2026-01-20 03:42:55,702 | INFO     | did not find any defunct processes belonging to 10407
[2026-01-19 22:43:57] 2026-01-20 03:42:55,702 | INFO     | ready for new job
[2026-01-19 22:43:57] 2026-01-20 03:42:55,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-19 22:43:57] 2026-01-20 03:42:55,704 | INFO     | ***************************************
[2026-01-19 22:43:57] 2026-01-20 03:42:55,704 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-19 22:43:57] 2026-01-20 03:42:55,704 | INFO     | ***************************************
[2026-01-19 22:43:57] 2026-01-20 03:42:55,705 | INFO     | 
[2026-01-19 22:43:57] 2026-01-20 03:42:55,705 | INFO     | architecture information:
[2026-01-19 22:43:57] 2026-01-20 03:42:55,706 | INFO     | executing command: cat /etc/os-release
[2026-01-19 22:43:57] 2026-01-20 03:42:55,724 | INFO     | cat /etc/os-release:
[2026-01-19 22:43:57] NAME="CentOS Linux"
[2026-01-19 22:43:57] VERSION="7 (Core)"
[2026-01-19 22:43:57] ID="centos"
[2026-01-19 22:43:57] ID_LIKE="rhel fedora"
[2026-01-19 22:43:57] VERSION_ID="7"
[2026-01-19 22:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-19 22:43:57] ANSI_COLOR="0;31"
[2026-01-19 22:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-19 22:43:57] HOME_URL="https://www.centos.org/"
[2026-01-19 22:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-19 22:43:57] 
[2026-01-19 22:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-19 22:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-19 22:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-19 22:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-19 22:43:57] 
[2026-01-19 22:43:57] 2026-01-20 03:42:55,724 | INFO     | ***************************************
[2026-01-19 22:43:57] 2026-01-20 03:42:56,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-19 22:43:57] 2026-01-20 03:42:56,246 | INFO     | sufficient remaining disk space (17986224128 B)
[2026-01-19 22:43:57] 2026-01-20 03:42:56,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-19 22:43:57] 2026-01-20 03:42:56,247 | INFO     | current server update state: UPDATING_FINAL
[2026-01-19 22:43:57] 2026-01-20 03:42:56,247 | INFO     | update_server=False
[2026-01-19 22:43:57] 2026-01-20 03:42:56,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-19 22:43:57] 2026-01-20 03:42:56,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-19 22:43:57] 2026-01-20 03:42:56,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-19 22:43:57] 2026-01-20 03:42:56,254 | INFO     | all data control threads have been joined
[2026-01-19 22:43:57] 2026-01-20 03:42:56,450 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-19 22:43:57] 2026-01-20 03:42:56,450 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-19 22:43:57] 2026-01-20 03:42:56,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-19 22:43:57] 2026-01-20 03:42:56,450 | INFO     | will abort loop
[2026-01-19 22:43:57] 2026-01-20 03:42:56,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-19 22:43:57] 2026-01-20 03:42:56,863 | INFO     | all payload control threads have been joined
[2026-01-19 22:43:57] 2026-01-20 03:42:57,229 | INFO     | all job control threads have been joined
[2026-01-19 22:43:57] 2026-01-20 03:42:57,248 | INFO     | [job] retrieve thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,253 | INFO     | [job] queue monitor thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,258 | INFO     | [data] control thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,456 | INFO     | [job] job monitor thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,565 | INFO     | [job] validate thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,566 | INFO     | [data] copytool_in thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,572 | INFO     | [payload] validate_pre thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,635 | INFO     | [payload] validate_post thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,737 | INFO     | [payload] execute_payloads thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:57,869 | INFO     | [payload] control thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:58,235 | INFO     | [job] control thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:58,312 | INFO     | [payload] failed_post thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:58,646 | INFO     | [data] copytool_out thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:42:58,647 | INFO     | [job] create_data_payload thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:43:00,254 | INFO     | [data] queue_monitor thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:43:06,725 | INFO     | job.realtimelogging is not enabled
[2026-01-19 22:43:57] 2026-01-20 03:43:07,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-19 22:43:57] 2026-01-20 03:43:26,159 | INFO     | PID=3921 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-19 22:43:57] 2026-01-20 03:43:26,159 | INFO     | found 0 job(s) in 20 queues
[2026-01-19 22:43:57] 2026-01-20 03:43:26,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-19 22:43:57] 2026-01-20 03:43:26,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-19 22:43:57] 2026-01-20 03:43:50,703 | INFO     | [monitor] cgroup control has ended
[2026-01-19 22:43:57] 2026-01-20 03:43:51,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135388718912)>', '<ExcThread(monitor, started 140134943008512)>']
[2026-01-19 22:43:57] 2026-01-20 03:43:52,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-19 22:43:57] 2026-01-20 03:43:52,283 | INFO     | [monitor] control thread has ended
[2026-01-19 22:43:57] 2026-01-20 03:43:56,852 | INFO     | all workflow threads have been joined
[2026-01-19 22:43:57] 2026-01-20 03:43:56,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-19 22:43:57] 2026-01-20 03:43:56,853 | INFO     | traces error code: 0
[2026-01-19 22:43:57] 2026-01-20 03:43:56,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-19 22:43:57] 2026-01-20 03:43:56,966 [wrapper] ==== pilot stdout END ====
[2026-01-19 22:43:57] 2026-01-20 03:43:56,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-19 22:43:57] 2026-01-20 03:43:56,975 [wrapper] pilotpid: 3921
[2026-01-19 22:43:57] 2026-01-20 03:43:56,979 [wrapper] Pilot exit status: 0
[2026-01-19 22:43:57] 2026-01-20 03:43:56,996 [wrapper] pandaids: 6969484842
[2026-01-19 22:43:57] 2026-01-20 03:43:57,053 [wrapper] cleanup supervisor_pilot 18004 3922
[2026-01-19 22:43:57] 2026-01-20 03:43:57,058 [wrapper] Test setup, not cleaning
[2026-01-19 22:43:57] 2026-01-20 03:43:57,063 [wrapper] apfmon messages muted
[2026-01-19 22:43:57] 2026-01-20 03:43:57,067 [wrapper] ==== wrapper stdout END ====
[2026-01-19 22:43:57] 2026-01-20 03:43:57,071 [wrapper] ==== wrapper stderr END ====
[2026-01-19 22:43:57]  *** Error codes and diagnostics ***
[2026-01-19 22:43:57]     "exeErrorCode": 0,
[2026-01-19 22:43:57]     "exeErrorDiag": "",
[2026-01-19 22:43:57]     "pilotErrorCode": 0,
[2026-01-19 22:43:57]     "pilotErrorDiag": "",
[2026-01-19 22:43:57]  *** Listing of results directory ***
[2026-01-19 22:43:57] total 731888
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 09:17 pilot3.tar.gz
[2026-01-19 22:43:57] -rwx------ 1 boincer umatlas     36322 Jan 14 09:21 runpilot2-wrapper.sh
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 09:25 queuedata.json
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas       100 Jan 19 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-19 22:43:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan 19 21:22 run_atlas
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas       105 Jan 19 21:22 job.xml
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas 593487608 Jan 19 21:22 EVNT.32794306._001042.pool.root.1
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 19 21:22 start_atlas.sh
[2026-01-19 22:43:57] drwxrwx--x 2 boincer umatlas      4096 Jan 19 21:22 shared
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas    592403 Jan 19 21:22 input.tar.gz
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas         0 Jan 19 21:22 boinc_lockfile
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas      2508 Jan 19 21:22 pandaJob.out
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas        57 Jan 19 21:22 setup.sh.local
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas   1004201 Jan 19 21:22 agis_schedconf.cvmfs.json
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas   1516246 Jan 19 21:22 agis_ddmendpoints.agis.ALL.json
[2026-01-19 22:43:57] drwx------ 5 boincer umatlas      4096 Jan 19 21:22 pilot3
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas      5910 Jan 19 22:39 init_data.xml
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas 149982092 Jan 19 22:42 HITS.48215263._026028.pool.root.1
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas       530 Jan 19 22:42 boinc_task_state.xml
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas      1046 Jan 19 22:42 memory_monitor_summary.json
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas    335119 Jan 19 22:42 log.48215263._026028.job.log.tgz.1
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas        95 Jan 19 22:42 pilot_heartbeat.json
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas      7843 Jan 19 22:42 heartbeat.json
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas      8192 Jan 19 22:43 boinc_mmap_file
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas        27 Jan 19 22:43 wrapper_checkpoint.txt
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas      5003 Jan 19 22:43 pilotlog.txt
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas    694430 Jan 19 22:43 log.48215263._026028.job.log.1
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas       357 Jan 19 22:43 output.list
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas       620 Jan 19 22:43 runtime_log
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas   1044480 Jan 19 22:43 result.tar.gz
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas       658 Jan 19 22:43 g5NODmkvG08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzPlKDmbxSAKn.diag
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas      9342 Jan 19 22:43 runtime_log.err
[2026-01-19 22:43:57] -rw-r--r-- 1 boincer umatlas     22295 Jan 19 22:43 stderr.txt
[2026-01-19 22:43:57] HITS file was successfully produced:
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas 149982092 Jan 19 22:42 shared/HITS.pool.root.1
[2026-01-19 22:43:57]  *** Contents of shared directory: ***
[2026-01-19 22:43:57] total 727668
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas 593487608 Jan 19 21:22 ATLAS.root_0
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas     15847 Jan 19 21:22 start_atlas.sh
[2026-01-19 22:43:57] -rw-r--r-- 2 boincer umatlas    592403 Jan 19 21:22 input.tar.gz
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas 149982092 Jan 19 22:42 HITS.pool.root.1
[2026-01-19 22:43:57] -rw------- 1 boincer umatlas   1044480 Jan 19 22:43 result.tar.gz
22:43:58 (32525): run_atlas exited; CPU time 34953.074157
22:43:58 (32525): called boinc_finish(0)

</stderr_txt>
]]>

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