Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:44 (109069): wrapper (7.7.26015): starting
12:30:44 (109069): wrapper: running run_atlas (--nthreads 8)
[2026-01-18 12:30:44] Arguments: --nthreads 8
[2026-01-18 12:30:44] Threads: 8
[2026-01-18 12:30:44] Checking for CVMFS
[2026-01-18 12:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-18 12:30:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-18 12:30:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-18 12:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-18 12:30:48] 2.13.3.0 13009 43339 264272 155286 2 380 23033832 32935936 26785 16776704 0 53611243 99.645 52672649 14122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-18 12:30:48] CVMFS is ok
[2026-01-18 12:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-18 12:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-18 12:30:48] Further information can be found at the LHC@home message board.
[2026-01-18 12:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-18 12:30:48] Checking for apptainer binary...
[2026-01-18 12:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-18 12:30:48] Running /usr/bin/apptainer --version
[2026-01-18 12:30:48] apptainer version 1.4.5-2.el9
[2026-01-18 12:30:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-18 12:30:50] c6-12-25-2.aglt2.org
[2026-01-18 12:30:50] apptainer works
[2026-01-18 12:30:50] Set ATHENA_PROC_NUMBER=8
[2026-01-18 12:30:50] Set ATHENA_CORE_NUMBER=8
[2026-01-18 12:30:50] Starting ATLAS job with PandaID=6974494927
[2026-01-18 12:30:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-18 20:42:00]  *** The last 200 lines of the pilot log: ***
[2026-01-18 20:42:00] 2026-01-19 01:40:36,553 | INFO     | job 6974494927 has finished - writing final server update
[2026-01-18 20:42:00] 2026-01-19 01:40:36,554 | INFO     | total number of processed events: 400 (read)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,685 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6974494927/memory_monitor_summary.json (trf name=prmon)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,686 | INFO     | extracted standard info from prmon json
[2026-01-18 20:42:00] 2026-01-19 01:40:36,687 | INFO     | extracted standard memory fields from prmon json
[2026-01-18 20:42:00] 2026-01-19 01:40:36,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-18 20:42:00] 2026-01-19 01:40:36,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-18 20:42:00] 2026-01-19 01:40:36,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-18 20:42:00] 2026-01-19 01:40:36,710 | INFO     | fitting pss+swap vs Time
[2026-01-18 20:42:00] 2026-01-19 01:40:36,712 | INFO     | sum of square deviations: 33650817874.079624
[2026-01-18 20:42:00] 2026-01-19 01:40:36,727 | INFO     | sum of deviations: 298946115618.5868
[2026-01-18 20:42:00] 2026-01-19 01:40:36,728 | INFO     | mean x: 1768772259.1991615
[2026-01-18 20:42:00] 2026-01-19 01:40:36,728 | INFO     | mean y: 2537750.4675052413
[2026-01-18 20:42:00] 2026-01-19 01:40:36,729 | INFO     | intersect: -15710827620.92211
[2026-01-18 20:42:00] 2026-01-19 01:40:36,730 | INFO     | chi2: 5.902006872103839
[2026-01-18 20:42:00] 2026-01-19 01:40:36,733 | INFO     | sum of square deviations: 32603725235.2352
[2026-01-18 20:42:00] 2026-01-19 01:40:36,749 | INFO     | sum of deviations: 326378033047.3203
[2026-01-18 20:42:00] 2026-01-19 01:40:36,754 | INFO     | mean x: 1768772106.7097456
[2026-01-18 20:42:00] 2026-01-19 01:40:36,754 | INFO     | mean y: 2541707.0826271186
[2026-01-18 20:42:00] 2026-01-19 01:40:36,754 | INFO     | intersect: -17703666921.89361
[2026-01-18 20:42:00] 2026-01-19 01:40:36,756 | INFO     | chi2: 5.222956031703422
[2026-01-18 20:42:00] 2026-01-19 01:40:36,756 | INFO     | current chi2=5.222956031703422 (change=11.50542273357878 %)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,757 | INFO     | right removable region: 471
[2026-01-18 20:42:00] 2026-01-19 01:40:36,758 | INFO     | sum of square deviations: 32603434021.2352
[2026-01-18 20:42:00] 2026-01-19 01:40:36,773 | INFO     | sum of deviations: 149890414958.15674
[2026-01-18 20:42:00] 2026-01-19 01:40:36,774 | INFO     | mean x: 1768772411.7097456
[2026-01-18 20:42:00] 2026-01-19 01:40:36,775 | INFO     | mean y: 2559436.1398305083
[2026-01-18 20:42:00] 2026-01-19 01:40:36,776 | INFO     | intersect: -8129161614.625396
[2026-01-18 20:42:00] 2026-01-19 01:40:36,777 | INFO     | chi2: 2.4382001923764007
[2026-01-18 20:42:00] 2026-01-19 01:40:36,778 | INFO     | current chi2=2.4382001923764007 (change=58.68862498448302 %)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,780 | INFO     | sum of square deviations: 31578033227.72168
[2026-01-18 20:42:00] 2026-01-19 01:40:36,794 | INFO     | sum of deviations: 55604511921.700165
[2026-01-18 20:42:00] 2026-01-19 01:40:36,795 | INFO     | mean x: 1768772564.2184155
[2026-01-18 20:42:00] 2026-01-19 01:40:36,795 | INFO     | mean y: 2573448.0813704496
[2026-01-18 20:42:00] 2026-01-19 01:40:36,795 | INFO     | intersect: -3111988324.167263
[2026-01-18 20:42:00] 2026-01-19 01:40:36,797 | INFO     | chi2: 1.1138888183000013
[2026-01-18 20:42:00] 2026-01-19 01:40:36,797 | INFO     | current chi2=1.1138888183000013 (change=54.31512056381451 %)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,799 | INFO     | sum of square deviations: 30574410624.536655
[2026-01-18 20:42:00] 2026-01-19 01:40:36,828 | INFO     | sum of deviations: 17683485892.960995
[2026-01-18 20:42:00] 2026-01-19 01:40:36,829 | INFO     | mean x: 1768772716.7229438
[2026-01-18 20:42:00] 2026-01-19 01:40:36,829 | INFO     | mean y: 2579200.616883117
[2026-01-18 20:42:00] 2026-01-19 01:40:36,829 | INFO     | intersect: -1020435364.3449388
[2026-01-18 20:42:00] 2026-01-19 01:40:36,831 | INFO     | chi2: 0.8754389676207486
[2026-01-18 20:42:00] 2026-01-19 01:40:36,831 | INFO     | current chi2=0.8754389676207486 (change=21.406970494880355 %)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,832 | INFO     | left removable region: 30
[2026-01-18 20:42:00] 2026-01-19 01:40:36,833 | INFO     | sum of square deviations: 26591501821.038654
[2026-01-18 20:42:00] 2026-01-19 01:40:36,846 | INFO     | sum of deviations: 16945451298.818594
[2026-01-18 20:42:00] 2026-01-19 01:40:36,847 | INFO     | mean x: 1768772991.2426305
[2026-01-18 20:42:00] 2026-01-19 01:40:36,847 | INFO     | mean y: 2588517.328798186
[2026-01-18 20:42:00] 2026-01-19 01:40:36,847 | INFO     | intersect: -1124563186.3803139
[2026-01-18 20:42:00] 2026-01-19 01:40:36,849 | INFO     | chi2: 0.08986404945764821
[2026-01-18 20:42:00] 2026-01-19 01:40:36,850 | INFO     | current memory leak: 0.64 B/s (using 441 data points, chi2=0.09)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,852 | INFO     | could have reported an average CPU frequency of 999 MHz (20 samples)
[2026-01-18 20:42:00] 2026-01-19 01:40:36,853 | INFO     | ..............................
[2026-01-18 20:42:00] 2026-01-19 01:40:36,853 | INFO     | . Timing measurements:
[2026-01-18 20:42:00] 2026-01-19 01:40:36,853 | INFO     | . get job = 0 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,854 | INFO     | . initial setup = 59 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,854 | INFO     | . payload setup = 67 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,854 | INFO     | . stage-in = 1 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,854 | INFO     | . payload execution = 29130 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,854 | INFO     | . stage-out = 4 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,855 | INFO     | . log creation = 0 s
[2026-01-18 20:42:00] 2026-01-19 01:40:36,855 | INFO     | ..............................
[2026-01-18 20:42:00] 2026-01-19 01:40:37,228 | INFO     | 
[2026-01-18 20:42:00] 2026-01-19 01:40:37,229 | INFO     | job summary report
[2026-01-18 20:42:00] 2026-01-19 01:40:37,229 | INFO     | --------------------------------------------------
[2026-01-18 20:42:00] 2026-01-19 01:40:37,229 | INFO     | PanDA job id: 6974494927
[2026-01-18 20:42:00] 2026-01-19 01:40:37,229 | INFO     | task id: 48215263
[2026-01-18 20:42:00] 2026-01-19 01:40:37,229 | INFO     | errors: (none)
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | pilot state: finished 
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | transexitcode: 0
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | exeerrorcode: 0
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | exeerrordiag: 
[2026-01-18 20:42:00] 2026-01-19 01:40:37,230 | INFO     | exitcode: 0
[2026-01-18 20:42:00] 2026-01-19 01:40:37,231 | INFO     | exitmsg: OK
[2026-01-18 20:42:00] 2026-01-19 01:40:37,231 | INFO     | cpuconsumptiontime: 72824 s
[2026-01-18 20:42:00] 2026-01-19 01:40:37,231 | INFO     | nevents: 400
[2026-01-18 20:42:00] 2026-01-19 01:40:37,231 | INFO     | neventsw: 0
[2026-01-18 20:42:00] 2026-01-19 01:40:37,231 | INFO     | pid: 123843
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | pgrp: 123843
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | corecount: 8
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | event service: False
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | sizes: {0: 2283069, 1: 2283670, 3: 2283754, 7: 2283782, 8: 2283810, 11: 2283810, 13: 2284455, 14: 2284455, 29202: 2320831, 29207: 2329829, 29209: 2329885, 29210: 2
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | --------------------------------------------------
[2026-01-18 20:42:00] 2026-01-19 01:40:37,232 | INFO     | 
[2026-01-18 20:42:00] 2026-01-19 01:40:37,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-18 20:42:00] 2026-01-19 01:40:37,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,285 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,292 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-18 20:42:00] 2026-01-19 01:40:37,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-18 20:42:00] 2026-01-19 01:40:37,294 | INFO     | job 6974494927 has completed (purged errors)
[2026-01-18 20:42:00] 2026-01-19 01:40:37,294 | INFO     | overall cleanup function is called
[2026-01-18 20:42:00] 2026-01-19 01:40:37,531 | INFO     | PID=115725 has CPU usage=35.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-18 20:42:00] 2026-01-19 01:40:37,532 | INFO     | .. there are 21 such processes running
[2026-01-18 20:42:00] 2026-01-19 01:40:38,315 | INFO     | --- collectZombieJob: --- 10, [123843]
[2026-01-18 20:42:00] 2026-01-19 01:40:38,316 | INFO     | zombie collector waiting for pid 123843
[2026-01-18 20:42:00] 2026-01-19 01:40:38,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-18 20:42:00] 2026-01-19 01:40:38,317 | INFO     | collected zombie processes
[2026-01-18 20:42:00] 2026-01-19 01:40:38,317 | INFO     | will attempt to kill all subprocesses of pid=123843
[2026-01-18 20:42:00] 2026-01-19 01:40:39,346 | INFO     | process IDs to be killed: [123843] (in reverse order)
[2026-01-18 20:42:00] 2026-01-19 01:40:39,654 | WARNING  | found no corresponding commands to process id(s)
[2026-01-18 20:42:00] 2026-01-19 01:40:39,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-18 20:42:00] 2026-01-19 01:40:39,693 | INFO     | did not find any defunct processes belonging to 123843
[2026-01-18 20:42:00] 2026-01-19 01:40:39,730 | INFO     | did not find any defunct processes belonging to 123843
[2026-01-18 20:42:00] 2026-01-19 01:40:39,730 | INFO     | ready for new job
[2026-01-18 20:42:00] 2026-01-19 01:40:39,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-18 20:42:00] 2026-01-19 01:40:39,735 | INFO     | **************************************
[2026-01-18 20:42:00] 2026-01-19 01:40:39,736 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-18 20:42:00] 2026-01-19 01:40:39,736 | INFO     | **************************************
[2026-01-18 20:42:00] 2026-01-19 01:40:39,736 | INFO     | 
[2026-01-18 20:42:00] 2026-01-19 01:40:39,751 | INFO     | architecture information:
[2026-01-18 20:42:00] 2026-01-19 01:40:39,752 | INFO     | executing command: cat /etc/os-release
[2026-01-18 20:42:00] 2026-01-19 01:40:39,786 | INFO     | cat /etc/os-release:
[2026-01-18 20:42:00] NAME="CentOS Linux"
[2026-01-18 20:42:00] VERSION="7 (Core)"
[2026-01-18 20:42:00] ID="centos"
[2026-01-18 20:42:00] ID_LIKE="rhel fedora"
[2026-01-18 20:42:00] VERSION_ID="7"
[2026-01-18 20:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-18 20:42:00] ANSI_COLOR="0;31"
[2026-01-18 20:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-18 20:42:00] HOME_URL="https://www.centos.org/"
[2026-01-18 20:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-18 20:42:00] 
[2026-01-18 20:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-18 20:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-18 20:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-18 20:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-18 20:42:00] 
[2026-01-18 20:42:00] 2026-01-19 01:40:39,787 | INFO     | **************************************
[2026-01-18 20:42:00] 2026-01-19 01:40:40,290 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-18 20:42:00] 2026-01-19 01:40:40,328 | INFO     | sufficient remaining disk space (92785344512 B)
[2026-01-18 20:42:00] 2026-01-19 01:40:40,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-18 20:42:00] 2026-01-19 01:40:40,329 | INFO     | current server update state: UPDATING_FINAL
[2026-01-18 20:42:00] 2026-01-19 01:40:40,330 | INFO     | update_server=False
[2026-01-18 20:42:00] 2026-01-19 01:40:40,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-18 20:42:00] 2026-01-19 01:40:40,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-18 20:42:00] 2026-01-19 01:40:40,376 | INFO     | all job control threads have been joined
[2026-01-18 20:42:00] 2026-01-19 01:40:40,722 | INFO     | all data control threads have been joined
[2026-01-18 20:42:00] 2026-01-19 01:40:40,806 | INFO     | all payload control threads have been joined
[2026-01-18 20:42:00] 2026-01-19 01:40:41,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-18 20:42:00] 2026-01-19 01:40:41,207 | INFO     | aborting loop
[2026-01-18 20:42:00] 2026-01-19 01:40:41,336 | INFO     | [job] retrieve thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,382 | INFO     | [job] control thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,398 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,726 | INFO     | [payload] validate_post thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,728 | INFO     | [data] control thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,800 | INFO     | [job] create_data_payload thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:41,812 | INFO     | [payload] control thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,123 | INFO     | [job] validate thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,140 | INFO     | [data] copytool_in thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-18 20:42:00] 2026-01-19 01:40:42,214 | INFO     | [job] job monitor thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,240 | INFO     | [payload] execute_payloads thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-18 20:42:00] 2026-01-19 01:40:42,337 | INFO     | [data] copytool_out thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,576 | INFO     | [payload] failed_post thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:42,768 | INFO     | [payload] validate_pre thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:43,170 | INFO     | [job] queue monitor thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:40:46,276 | INFO     | [data] queue_monitor thread has finished
[2026-01-18 20:42:00] 2026-01-19 01:41:10,987 | INFO     | PID=115725 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-18 20:42:00] 2026-01-19 01:41:10,988 | INFO     | .. there are 21 such processes running
[2026-01-18 20:42:00] 2026-01-19 01:41:10,990 | INFO     | found 0 job(s) in 20 queues
[2026-01-18 20:42:00] 2026-01-19 01:41:10,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-18 20:42:00] 2026-01-19 01:41:10,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-18 20:42:00] 2026-01-19 01:41:25,753 | INFO     | [monitor] cgroup control has ended
[2026-01-18 20:42:00] 2026-01-19 01:41:27,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925299681088)>', '<ExcThread(monitor, started 139925017343744)>']
[2026-01-18 20:42:00] 2026-01-19 01:41:28,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-18 20:42:00] 2026-01-19 01:41:28,089 | INFO     | [monitor] control thread has ended
[2026-01-18 20:42:00] 2026-01-19 01:41:32,205 | INFO     | all workflow threads have been joined
[2026-01-18 20:42:00] 2026-01-19 01:41:32,208 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-18 20:42:00] 2026-01-19 01:41:32,208 | INFO     | traces error code: 0
[2026-01-18 20:42:00] 2026-01-19 01:41:32,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-18 20:42:00] 2026-01-19 01:41:32,622 [wrapper] ==== pilot stdout END ====
[2026-01-18 20:42:00] 2026-01-19 01:41:32,631 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-18 20:42:00] 2026-01-19 01:41:32,637 [wrapper] pilotpid: 115725
[2026-01-18 20:42:00] 2026-01-19 01:41:32,644 [wrapper] Pilot exit status: 0
[2026-01-18 20:42:00] 2026-01-19 01:41:32,672 [wrapper] pandaids: 6974494927
[2026-01-18 20:42:00] 2026-01-19 01:41:32,890 [wrapper] cleanup supervisor_pilot 1412133 115726
[2026-01-18 20:42:00] 2026-01-19 01:41:32,897 [wrapper] Test setup, not cleaning
[2026-01-18 20:42:00] 2026-01-19 01:41:32,903 [wrapper] apfmon messages muted
[2026-01-18 20:42:00] 2026-01-19 01:41:32,909 [wrapper] ==== wrapper stdout END ====
[2026-01-18 20:42:00] 2026-01-19 01:41:32,916 [wrapper] ==== wrapper stderr END ====
[2026-01-18 20:42:00]  *** Error codes and diagnostics ***
[2026-01-18 20:42:00]     "exeErrorCode": 0,
[2026-01-18 20:42:00]     "exeErrorDiag": "",
[2026-01-18 20:42:00]     "pilotErrorCode": 0,
[2026-01-18 20:42:00]     "pilotErrorDiag": "",
[2026-01-18 20:42:00]  *** Listing of results directory ***
[2026-01-18 20:42:00] total 739152
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas    584422 Jan 18 10:51 pilot3.tar.gz
[2026-01-18 20:42:00] -rwx------. 1 boincer umatlas     36322 Jan 18 11:08 runpilot2-wrapper.sh
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas      5111 Jan 18 11:08 queuedata.json
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas       100 Jan 18 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-18 20:42:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 18 12:30 run_atlas
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas       105 Jan 18 12:30 job.xml
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas 597095458 Jan 18 12:30 EVNT.32794306._000537.pool.root.1
[2026-01-18 20:42:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 18 12:30 shared
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas    597761 Jan 18 12:30 input.tar.gz
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 18 12:30 start_atlas.sh
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas         0 Jan 18 12:30 boinc_lockfile
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas      2505 Jan 18 12:30 pandaJob.out
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas        57 Jan 18 12:30 setup.sh.local
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas   1002735 Jan 18 12:32 agis_schedconf.cvmfs.json
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas       443 Jan 18 12:33 workernode_map.json
[2026-01-18 20:42:00] drwx------. 5 boincer umatlas      4096 Jan 18 12:33 pilot3
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas      6859 Jan 18 20:38 init_data.xml
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas 148797060 Jan 18 20:39 HITS.48215263._052645.pool.root.1
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas       531 Jan 18 20:39 boinc_task_state.xml
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas      1053 Jan 18 20:40 memory_monitor_summary.json
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas   1516246 Jan 18 20:40 agis_ddmendpoints.agis.ALL.json
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas    594275 Jan 18 20:40 log.48215263._052645.job.log.tgz.1
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas      6390 Jan 18 20:40 heartbeat.json
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas        95 Jan 18 20:41 pilot_heartbeat.json
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas      4819 Jan 18 20:41 pilotlog.txt
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas   2934290 Jan 18 20:41 log.48215263._052645.job.log.1
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas       357 Jan 18 20:41 output.list
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas       620 Jan 18 20:41 runtime_log
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas   3543040 Jan 18 20:41 result.tar.gz
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas      9352 Jan 18 20:41 runtime_log.err
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas       661 Jan 18 20:41 pNOLDmeVk18nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCIvKDmtlcYDm.diag
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas        28 Jan 18 20:41 wrapper_checkpoint.txt
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 18 20:42 boinc_mmap_file
[2026-01-18 20:42:00] -rw-r--r--. 1 boincer umatlas     21281 Jan 18 20:42 stderr.txt
[2026-01-18 20:42:00] HITS file was successfully produced:
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas 148797060 Jan 18 20:39 shared/HITS.pool.root.1
[2026-01-18 20:42:00]  *** Contents of shared directory: ***
[2026-01-18 20:42:00] total 732484
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas 597095458 Jan 18 12:30 ATLAS.root_0
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas    597761 Jan 18 12:30 input.tar.gz
[2026-01-18 20:42:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 18 12:30 start_atlas.sh
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas 148797060 Jan 18 20:39 HITS.pool.root.1
[2026-01-18 20:42:00] -rw-------. 1 boincer umatlas   3543040 Jan 18 20:41 result.tar.gz
20:42:02 (109069): run_atlas exited; CPU time 75498.509632
20:42:02 (109069): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN