Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
04:58:50 (2380108): wrapper (7.7.26015): starting
04:58:50 (2380108): wrapper: running run_atlas (--nthreads 12)
[2026-01-18 04:58:50] Arguments: --nthreads 12
[2026-01-18 04:58:50] Threads: 12
[2026-01-18 04:58:50] Checking for CVMFS
[2026-01-18 04:58:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-18 04:58:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-18 04:58:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-18 04:58:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-18 04:58:50] 2.12.7.0 2343792 37 47136 155273 2 90 4080549 4194305 658 130560 0 115602 99.979 3555 1427 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-18 04:58:50] CVMFS is ok
[2026-01-18 04:58:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-18 04:58:50] Checking for apptainer binary...
[2026-01-18 04:58:50] apptainer is not installed, using version from CVMFS
[2026-01-18 04:58:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-18 04:58:50] Trebeth
[2026-01-18 04:58:50] apptainer works
[2026-01-18 04:58:50] Set ATHENA_PROC_NUMBER=12
[2026-01-18 04:58:50] Set ATHENA_CORE_NUMBER=12
[2026-01-18 04:58:50] Starting ATLAS job with PandaID=6970285069
[2026-01-18 04:58:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-18 05:34:30]  *** The last 200 lines of the pilot log: ***
[2026-01-18 05:34:30]  protocol_id=None
[2026-01-18 05:34:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-18 05:34:30]  replicas=None
[2026-01-18 05:34:30]  scope=mc23_13p6TeV
[2026-01-18 05:34:30]  status=None
[2026-01-18 05:34:30]  status_code=0
[2026-01-18 05:34:30]  storage_token=
[2026-01-18 05:34:30]  surl=/var/lib/boinc-client/slots/9/PanDA_Pilot-6970285069/log.48215263._043255.job.log.tgz.1
[2026-01-18 05:34:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/8d/log.48215263._043255.job.log.tgz.1
[2026-01-18 05:34:30]  workdir=None
[2026-01-18 05:34:30] ]
[2026-01-18 05:34:30] 2026-01-18 10:33:51,806 | INFO     | transferring file log.48215263._043255.job.log.tgz.1 from /var/lib/boinc-client/slots/9/PanDA_Pilot-6970285069/log.48215263._043255.job.log.tgz.1 to /var/lib/boinc
[2026-01-18 05:34:30] 2026-01-18 10:33:51,806 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/9/PanDA_Pilot-6970285069/log.48215263._043255.job.log.tgz.1 /var/lib/boinc-client/slots/9/log.482152
[2026-01-18 05:34:30] 2026-01-18 10:33:51,818 | INFO     | adding to output.list: log.48215263._043255.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/8d/log.48215263._043255.job.log.tg
[2026-01-18 05:34:30] 2026-01-18 10:33:51,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-18 05:34:30] 2026-01-18 10:33:51,819 | INFO     | summary of transferred files:
[2026-01-18 05:34:30] 2026-01-18 10:33:51,819 | INFO     |  -- lfn=log.48215263._043255.job.log.tgz.1, status_code=0, status=transferred
[2026-01-18 05:34:30] 2026-01-18 10:33:51,819 | INFO     | stage-out finished correctly
[2026-01-18 05:34:30] 2026-01-18 10:33:52,927 | INFO     | time since job start (2089s) is within the limit (349056.0s)
[2026-01-18 05:34:30] 2026-01-18 10:33:53,438 | WARNING  | process 2391287 can no longer be monitored (due to stat problems) - aborting
[2026-01-18 05:34:30] 2026-01-18 10:33:53,438 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6970285069/memory_monitor_summary.json (trf name=prmon)
[2026-01-18 05:34:30] 2026-01-18 10:33:53,631 | INFO     | number of running child processes to parent process 2391287: 1
[2026-01-18 05:34:30] 2026-01-18 10:33:53,631 | INFO     | maximum number of monitored processes: 6
[2026-01-18 05:34:30] 2026-01-18 10:33:53,994 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-18 05:34:30] 2026-01-18 10:33:54,931 | INFO     | time since job start (2091s) is within the limit (349056.0s)
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | job 6970285069 has state=finished
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | preparing for final server update for job 6970285069 in state='finished'
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | this job has now completed (state=finished)
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | log transfer has been attempted: DONE
[2026-01-18 05:34:30] 2026-01-18 10:33:55,383 | INFO     | job 6970285069 has finished - writing final server update
[2026-01-18 05:34:30] 2026-01-18 10:33:55,384 | INFO     | total number of processed events: 400 (read)
[2026-01-18 05:34:30] 2026-01-18 10:33:55,385 | INFO     | executing command: lscpu
[2026-01-18 05:34:30] 2026-01-18 10:33:55,439 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-18 05:34:30] 2026-01-18 10:33:56,134 | INFO     | monitor loop #160: job 0:6970285069 is in state 'finished'
[2026-01-18 05:34:30] 2026-01-18 10:33:56,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 05:34:30] 2026-01-18 10:33:56,935 | INFO     | time since job start (2093s) is within the limit (349056.0s)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,155 | INFO     | PID=2384341 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-18 05:34:30] 2026-01-18 10:33:58,258 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-18 05:34:30] 2026-01-18 10:33:58,267 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2972.654803571429
[2026-01-18 05:34:30] 2026-01-18 10:33:58,273 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-6970285069/memory_monitor_summary.json (trf name=prmon)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,273 | INFO     | extracted standard info from prmon json
[2026-01-18 05:34:30] 2026-01-18 10:33:58,274 | INFO     | extracted standard memory fields from prmon json
[2026-01-18 05:34:30] 2026-01-18 10:33:58,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-18 05:34:30] 2026-01-18 10:33:58,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-18 05:34:30] 2026-01-18 10:33:58,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-18 05:34:30] 2026-01-18 10:33:58,275 | INFO     | fitting pss+swap vs Time
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | sum of square deviations: 6094998.0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | sum of deviations: -1311159071.0000005
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | mean x: 1768731462.0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | mean y: 2859871.3333333335
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | intersect: 380493271937.81683
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | chi2: 0.08128159003895923
[2026-01-18 05:34:30] 2026-01-18 10:33:58,276 | INFO     | current memory leak: -215.12 B/s (using 27 data points, chi2=0.08)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,277 | INFO     | could have reported an average CPU frequency of 2905 MHz (5 samples)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,277 | INFO     | ..............................
[2026-01-18 05:34:30] 2026-01-18 10:33:58,277 | INFO     | . Timing measurements:
[2026-01-18 05:34:30] 2026-01-18 10:33:58,277 | INFO     | . get job = 0 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,277 | INFO     | . initial setup = 3 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | . payload setup = 4 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | . stage-in = 0 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | . payload execution = 2066 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | . stage-out = 0 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | . log creation = 0 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,278 | INFO     | ..............................
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | 
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | job summary report
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | --------------------------------------------------
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | PanDA job id: 6970285069
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | task id: 48215263
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | errors: (none)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,601 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | pilot state: finished 
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | transexitcode: 0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | exeerrorcode: 0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | exeerrordiag: 
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | exitcode: 0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | exitmsg: OK
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | cpuconsumptiontime: 20012 s
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | nevents: 400
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | neventsw: 0
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | pid: 2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | pgrp: 2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | corecount: 12
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | event service: False
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | sizes: {0: 2283071, 1: 2283934, 4: 2284196, 12: 2284224, 2074: 2318280, 2076: 2318280, 2081: 2318634}
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | --------------------------------------------------
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | 
[2026-01-18 05:34:30] 2026-01-18 10:33:58,602 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | job 6970285069 has completed (purged errors)
[2026-01-18 05:34:30] 2026-01-18 10:33:58,615 | INFO     | overall cleanup function is called
[2026-01-18 05:34:30] 2026-01-18 10:33:59,622 | INFO     | --- collectZombieJob: --- 10, [2391287]
[2026-01-18 05:34:30] 2026-01-18 10:33:59,623 | INFO     | zombie collector waiting for pid 2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:59,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-18 05:34:30] 2026-01-18 10:33:59,623 | INFO     | collected zombie processes
[2026-01-18 05:34:30] 2026-01-18 10:33:59,623 | INFO     | will attempt to kill all subprocesses of pid=2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:59,791 | INFO     | process IDs to be killed: [2391287] (in reverse order)
[2026-01-18 05:34:30] 2026-01-18 10:33:59,843 | WARNING  | found no corresponding commands to process id(s)
[2026-01-18 05:34:30] 2026-01-18 10:33:59,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-18 05:34:30] 2026-01-18 10:33:59,850 | INFO     | did not find any defunct processes belonging to 2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:59,853 | INFO     | did not find any defunct processes belonging to 2391287
[2026-01-18 05:34:30] 2026-01-18 10:33:59,853 | INFO     | ready for new job
[2026-01-18 05:34:30] 2026-01-18 10:33:59,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-18 05:34:30] 2026-01-18 10:33:59,854 | INFO     | ***************************************
[2026-01-18 05:34:30] 2026-01-18 10:33:59,854 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-18 05:34:30] 2026-01-18 10:33:59,854 | INFO     | ***************************************
[2026-01-18 05:34:30] 2026-01-18 10:33:59,854 | INFO     | 
[2026-01-18 05:34:30] 2026-01-18 10:33:59,878 | INFO     | architecture information:
[2026-01-18 05:34:30] 2026-01-18 10:33:59,879 | INFO     | executing command: cat /etc/os-release
[2026-01-18 05:34:30] 2026-01-18 10:33:59,887 | INFO     | cat /etc/os-release:
[2026-01-18 05:34:30] NAME="CentOS Linux"
[2026-01-18 05:34:30] VERSION="7 (Core)"
[2026-01-18 05:34:30] ID="centos"
[2026-01-18 05:34:30] ID_LIKE="rhel fedora"
[2026-01-18 05:34:30] VERSION_ID="7"
[2026-01-18 05:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-18 05:34:30] ANSI_COLOR="0;31"
[2026-01-18 05:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-18 05:34:30] HOME_URL="https://www.centos.org/"
[2026-01-18 05:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-18 05:34:30] 
[2026-01-18 05:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-18 05:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-18 05:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-18 05:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-18 05:34:30] 
[2026-01-18 05:34:30] 2026-01-18 10:33:59,887 | INFO     | ***************************************
[2026-01-18 05:34:30] 2026-01-18 10:34:00,390 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2026-01-18 05:34:30] 2026-01-18 10:34:00,401 | INFO     | sufficient remaining disk space (393536864256 B)
[2026-01-18 05:34:30] 2026-01-18 10:34:00,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-18 05:34:30] 2026-01-18 10:34:00,402 | INFO     | current server update state: UPDATING_FINAL
[2026-01-18 05:34:30] 2026-01-18 10:34:00,402 | INFO     | update_server=False
[2026-01-18 05:34:30] 2026-01-18 10:34:00,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-18 05:34:30] 2026-01-18 10:34:00,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-18 05:34:30] 2026-01-18 10:34:00,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-18 05:34:30] 2026-01-18 10:34:00,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-18 05:34:30] 2026-01-18 10:34:00,403 | INFO     | aborting loop
[2026-01-18 05:34:30] 2026-01-18 10:34:00,905 | INFO     | all job control threads have been joined
[2026-01-18 05:34:30] 2026-01-18 10:34:01,206 | INFO     | all data control threads have been joined
[2026-01-18 05:34:30] 2026-01-18 10:34:01,314 | INFO     | all payload control threads have been joined
[2026-01-18 05:34:30] 2026-01-18 10:34:01,406 | INFO     | [job] job monitor thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,407 | INFO     | [job] retrieve thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,548 | INFO     | [payload] validate_pre thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,690 | INFO     | [data] copytool_in thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,896 | INFO     | [payload] validate_post thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:01,910 | INFO     | [job] control thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,210 | INFO     | [data] control thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,320 | INFO     | [payload] control thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,409 | INFO     | [data] copytool_out thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,634 | INFO     | [payload] failed_post thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,708 | INFO     | [job] validate thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:02,784 | INFO     | [payload] execute_payloads thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:03,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-18 05:34:30] 2026-01-18 10:34:04,366 | INFO     | [job] queue monitor thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:04,409 | INFO     | [data] queue_monitor thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:05,778 | INFO     | [monitor] cgroup control has ended
[2026-01-18 05:34:30] 2026-01-18 10:34:11,254 | INFO     | job.realtimelogging is not enabled
[2026-01-18 05:34:30] 2026-01-18 10:34:12,258 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-18 05:34:30] 2026-01-18 10:34:13,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017758537536)>', '<ExcThread(monitor, started 140017192130304)>']
[2026-01-18 05:34:30] 2026-01-18 10:34:18,978 | INFO     | all workflow threads have been joined
[2026-01-18 05:34:30] 2026-01-18 10:34:18,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-18 05:34:30] 2026-01-18 10:34:18,979 | INFO     | traces error code: 0
[2026-01-18 05:34:30] 2026-01-18 10:34:18,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-18 05:34:30] 2026-01-18 10:34:30,429 | INFO     | PID=2384341 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-18 05:34:30] 2026-01-18 10:34:30,430 | INFO     | found 0 job(s) in 20 queues
[2026-01-18 05:34:30] 2026-01-18 10:34:30,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-18 05:34:30] 2026-01-18 10:34:30,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-18 05:34:30] 2026-01-18 10:34:30,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-18 05:34:30] 2026-01-18 10:34:30,430 | INFO     | [monitor] control thread has ended
[2026-01-18 05:34:30] 2026-01-18 10:34:30,519 [wrapper] ==== pilot stdout END ====
[2026-01-18 05:34:30] 2026-01-18 10:34:30,520 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-18 05:34:30] 2026-01-18 10:34:30,522 [wrapper] pilotpid: 2384341
[2026-01-18 05:34:30] 2026-01-18 10:34:30,524 [wrapper] Pilot exit status: 0
[2026-01-18 05:34:30] 2026-01-18 10:34:30,530 [wrapper] pandaids: 6970285069
[2026-01-18 05:34:30] 2026-01-18 10:34:30,564 [wrapper] cleanup supervisor_pilot 2404156 2384342
[2026-01-18 05:34:30] 2026-01-18 10:34:30,567 [wrapper] Test setup, not cleaning
[2026-01-18 05:34:30] 2026-01-18 10:34:30,568 [wrapper] apfmon messages muted
[2026-01-18 05:34:30] 2026-01-18 10:34:30,569 [wrapper] ==== wrapper stdout END ====
[2026-01-18 05:34:30] 2026-01-18 10:34:30,571 [wrapper] ==== wrapper stderr END ====
[2026-01-18 05:34:30]  *** Error codes and diagnostics ***
[2026-01-18 05:34:30]     "exeErrorCode": 0,
[2026-01-18 05:34:30]     "exeErrorDiag": "",
[2026-01-18 05:34:30]     "pilotErrorCode": 0,
[2026-01-18 05:34:30]     "pilotErrorDiag": "",
[2026-01-18 05:34:30]  *** Listing of results directory ***
[2026-01-18 05:34:30] total 729968
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc      5112 Jan 14 22:00 queuedata.json
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-18 05:34:30] -rwx------ 1 boinc boinc     36322 Jan 14 22:02 runpilot2-wrapper.sh
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc       100 Jan 18 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-18 05:34:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 18 04:58 run_atlas
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc       105 Jan 18 04:58 job.xml
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc     15847 Jan 18 04:58 start_atlas.sh
[2026-01-18 05:34:30] drwxrwx--x 2 boinc boinc      4096 Jan 18 04:58 shared
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc    592415 Jan 18 04:58 input.tar.gz
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc      7579 Jan 18 04:58 init_data.xml
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc 594693461 Jan 18 04:58 EVNT.32794306._000912.pool.root.1
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc         0 Jan 18 04:58 boinc_lockfile
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc      2507 Jan 18 04:58 pandaJob.out
[2026-01-18 05:34:30] -rw------- 1 boinc boinc        50 Jan 18 04:58 setup.sh.local
[2026-01-18 05:34:30] -rw------- 1 boinc boinc   1002735 Jan 18 04:58 agis_schedconf.cvmfs.json
[2026-01-18 05:34:30] -rw------- 1 boinc boinc   1516246 Jan 18 04:59 agis_ddmendpoints.agis.ALL.json
[2026-01-18 05:34:30] drwx------ 5 boinc boinc      4096 Jan 18 04:59 pilot3
[2026-01-18 05:34:30] -rw------- 1 boinc boinc 147486152 Jan 18 05:33 HITS.48215263._043255.pool.root.1
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc       530 Jan 18 05:33 boinc_task_state.xml
[2026-01-18 05:34:30] -rw------- 1 boinc boinc      1019 Jan 18 05:33 memory_monitor_summary.json
[2026-01-18 05:34:30] -rw------- 1 boinc boinc    355228 Jan 18 05:33 log.48215263._043255.job.log.tgz.1
[2026-01-18 05:34:30] -rw------- 1 boinc boinc      7771 Jan 18 05:33 heartbeat.json
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc      8192 Jan 18 05:34 boinc_mmap_file
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc        27 Jan 18 05:34 wrapper_checkpoint.txt
[2026-01-18 05:34:30] -rw------- 1 boinc boinc       747 Jan 18 05:34 pilotlog.txt
[2026-01-18 05:34:30] -rw------- 1 boinc boinc        95 Jan 18 05:34 pilot_heartbeat.json
[2026-01-18 05:34:30] -rw------- 1 boinc boinc    336833 Jan 18 05:34 log.48215263._043255.job.log.1
[2026-01-18 05:34:30] -rw------- 1 boinc boinc       357 Jan 18 05:34 output.list
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc       620 Jan 18 05:34 runtime_log
[2026-01-18 05:34:30] -rw------- 1 boinc boinc    706560 Jan 18 05:34 result.tar.gz
[2026-01-18 05:34:30] -rw------- 1 boinc boinc       649 Jan 18 05:34 uFLNDmynS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIbnKDmLOF9Wn.diag
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc      9404 Jan 18 05:34 runtime_log.err
[2026-01-18 05:34:30] -rw-r--r-- 1 boinc boinc     21701 Jan 18 05:34 stderr.txt
[2026-01-18 05:34:30] HITS file was successfully produced:
[2026-01-18 05:34:30] -rw------- 1 boinc boinc 147486152 Jan 18 05:33 shared/HITS.pool.root.1
[2026-01-18 05:34:30]  *** Contents of shared directory: ***
[2026-01-18 05:34:30] total 726084
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc     15847 Jan 18 04:58 start_atlas.sh
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc    592415 Jan 18 04:58 input.tar.gz
[2026-01-18 05:34:30] -rw-r--r-- 2 boinc boinc 594693461 Jan 18 04:58 ATLAS.root_0
[2026-01-18 05:34:30] -rw------- 1 boinc boinc 147486152 Jan 18 05:33 HITS.pool.root.1
[2026-01-18 05:34:30] -rw------- 1 boinc boinc    706560 Jan 18 05:34 result.tar.gz
05:34:32 (2380108): run_atlas exited; CPU time 20045.682684
05:34:32 (2380108): called boinc_finish(0)

</stderr_txt>
]]>

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