Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:09:50 (44243): wrapper (7.7.26015): starting
08:09:50 (44243): wrapper: running run_atlas (--nthreads 8)
[2026-01-17 08:09:50] Arguments: --nthreads 8
[2026-01-17 08:09:50] Threads: 8
[2026-01-17 08:09:50] Checking for CVMFS
[2026-01-17 08:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-17 08:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-17 08:09:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-17 08:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-17 08:09:50] 2.11.2.0 13817 620280 314152 155243 1 1 16300286 18432001 1 130560 8 322935613 99.680 268884073 24530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-17 08:09:50] CVMFS is ok
[2026-01-17 08:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-17 08:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-17 08:09:50] Further information can be found at the LHC@home message board.
[2026-01-17 08:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-17 08:09:50] Checking for apptainer binary...
[2026-01-17 08:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-17 08:09:50] Running /usr/bin/apptainer --version
[2026-01-17 08:09:51] apptainer version 1.3.2-1.el7
[2026-01-17 08:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-17 08:09:51] c-9-29.aglt2.org
[2026-01-17 08:09:51] apptainer works
[2026-01-17 08:09:51] Set ATHENA_PROC_NUMBER=8
[2026-01-17 08:09:51] Set ATHENA_CORE_NUMBER=8
[2026-01-17 08:09:51] Starting ATLAS job with PandaID=6970395782
[2026-01-17 08:09:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-17 09:09:13]  *** The last 200 lines of the pilot log: ***
[2026-01-17 09:09:13] 2026-01-17 14:08:20,162 | INFO     | transferring file log.48215263._047794.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/log.48215263._047794.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-17 09:09:13] 2026-01-17 14:08:20,162 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/log.48215263._047794.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._047794.job
[2026-01-17 09:09:13] 2026-01-17 14:08:20,178 | INFO     | adding to output.list: log.48215263._047794.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/a7/log.48215263._047794.job.log.tg
[2026-01-17 09:09:13] 2026-01-17 14:08:20,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-17 09:09:13] 2026-01-17 14:08:20,179 | INFO     | summary of transferred files:
[2026-01-17 09:09:13] 2026-01-17 14:08:20,179 | INFO     |  -- lfn=log.48215263._047794.job.log.tgz.1, status_code=0, status=transferred
[2026-01-17 09:09:13] 2026-01-17 14:08:20,179 | INFO     | stage-out finished correctly
[2026-01-17 09:09:13] 2026-01-17 14:08:20,885 | INFO     | time since job start (3498s) is within the limit (349056.0s)
[2026-01-17 09:09:13] 2026-01-17 14:08:22,891 | INFO     | time since job start (3500s) is within the limit (349056.0s)
[2026-01-17 09:09:13] 2026-01-17 14:08:23,157 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-17 09:09:13] 2026-01-17 14:08:24,162 | WARNING  | process 7639 can no longer be monitored (due to stat problems) - aborting
[2026-01-17 09:09:13] 2026-01-17 14:08:24,162 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,163 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,163 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-17 09:09:13] 2026-01-17 14:08:24,163 | WARNING  | maxPSS not found in memory monitor output
[2026-01-17 09:09:13] 2026-01-17 14:08:24,164 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3178006 B
[2026-01-17 09:09:13] 2026-01-17 14:08:24,164 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15835 B
[2026-01-17 09:09:13] 2026-01-17 14:08:24,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-17 09:09:13] 2026-01-17 14:08:24,180 | INFO     | sufficient remaining disk space (105848504320 B)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,180 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,180 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6970395782: 3469686 B (within 4404019200 B limit)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,181 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6970395782/HITS.48215263._047794.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,181 | INFO     | total size of present files: 0 B (workdir size: 3469686 B)
[2026-01-17 09:09:13] 2026-01-17 14:08:24,181 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/HITS.48215263._047794.pool.root.1 since it does not exist
[2026-01-17 09:09:13] 2026-01-17 14:08:24,287 | INFO     | number of running child processes to parent process 7639: 1
[2026-01-17 09:09:13] 2026-01-17 14:08:24,288 | INFO     | maximum number of monitored processes: 6
[2026-01-17 09:09:13] 2026-01-17 14:08:24,897 | INFO     | time since job start (3502s) is within the limit (349056.0s)
[2026-01-17 09:09:13] 2026-01-17 14:08:25,217 | INFO     | job 6970395782 has state=finished
[2026-01-17 09:09:13] 2026-01-17 14:08:25,217 | INFO     | preparing for final server update for job 6970395782 in state='finished'
[2026-01-17 09:09:13] 2026-01-17 14:08:25,218 | INFO     | this job has now completed (state=finished)
[2026-01-17 09:09:13] 2026-01-17 14:08:25,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-17 09:09:13] 2026-01-17 14:08:25,219 | INFO     | log transfer has been attempted: DONE
[2026-01-17 09:09:13] 2026-01-17 14:08:25,219 | INFO     | job 6970395782 has finished - writing final server update
[2026-01-17 09:09:13] 2026-01-17 14:08:25,219 | INFO     | total number of processed events: 400 (read)
[2026-01-17 09:09:13] 2026-01-17 14:08:25,220 | INFO     | executing command: lscpu
[2026-01-17 09:09:13] 2026-01-17 14:08:25,262 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-17 09:09:13] 2026-01-17 14:08:26,790 | INFO     | monitor loop #268: job 0:6970395782 is in state 'finished'
[2026-01-17 09:09:13] 2026-01-17 14:08:26,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 09:09:13] 2026-01-17 14:08:26,902 | INFO     | time since job start (3504s) is within the limit (349056.0s)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,270 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-17 09:09:13] 2026-01-17 14:08:28,275 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2192.3212500000004
[2026-01-17 09:09:13] 2026-01-17 14:08:28,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970395782/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,279 | INFO     | extracted standard info from prmon json
[2026-01-17 09:09:13] 2026-01-17 14:08:28,279 | INFO     | extracted standard memory fields from prmon json
[2026-01-17 09:09:13] 2026-01-17 14:08:28,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-17 09:09:13] 2026-01-17 14:08:28,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-17 09:09:13] 2026-01-17 14:08:28,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | fitting pss+swap vs Time
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | sum of square deviations: 38744912.5
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | sum of deviations: 553606110.0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | mean x: 1768657224.5
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | mean y: 2521226.72
[2026-01-17 09:09:13] 2026-01-17 14:08:28,281 | INFO     | intersect: -25268911402.75985
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | chi2: 0.00031518645662008757
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | current memory leak: 14.29 B/s (using 50 data points, chi2=0.00)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | could have reported an average CPU frequency of 2672 MHz (5 samples)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | ..............................
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | . Timing measurements:
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | . get job = 0 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | . initial setup = 2 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | . payload setup = 4 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,282 | INFO     | . stage-in = 0 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,283 | INFO     | . payload execution = 3473 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,283 | INFO     | . stage-out = 0 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,283 | INFO     | . log creation = 0 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,283 | INFO     | ..............................
[2026-01-17 09:09:13] 2026-01-17 14:08:28,339 | INFO     | 
[2026-01-17 09:09:13] 2026-01-17 14:08:28,339 | INFO     | job summary report
[2026-01-17 09:09:13] 2026-01-17 14:08:28,339 | INFO     | --------------------------------------------------
[2026-01-17 09:09:13] 2026-01-17 14:08:28,339 | INFO     | PanDA job id: 6970395782
[2026-01-17 09:09:13] 2026-01-17 14:08:28,340 | INFO     | task id: 48215263
[2026-01-17 09:09:13] 2026-01-17 14:08:28,340 | INFO     | errors: (none)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,340 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-17 09:09:13] 2026-01-17 14:08:28,340 | INFO     | pilot state: finished 
[2026-01-17 09:09:13] 2026-01-17 14:08:28,340 | INFO     | transexitcode: 0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,341 | INFO     | exeerrorcode: 0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,341 | INFO     | exeerrordiag: 
[2026-01-17 09:09:13] 2026-01-17 14:08:28,341 | INFO     | exitcode: 0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,341 | INFO     | exitmsg: OK
[2026-01-17 09:09:13] 2026-01-17 14:08:28,342 | INFO     | cpuconsumptiontime: 25685 s
[2026-01-17 09:09:13] 2026-01-17 14:08:28,342 | INFO     | nevents: 400
[2026-01-17 09:09:13] 2026-01-17 14:08:28,342 | INFO     | neventsw: 0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,342 | INFO     | pid: 7639
[2026-01-17 09:09:13] 2026-01-17 14:08:28,342 | INFO     | pgrp: 7639
[2026-01-17 09:09:13] 2026-01-17 14:08:28,343 | INFO     | corecount: 8
[2026-01-17 09:09:13] 2026-01-17 14:08:28,343 | INFO     | event service: False
[2026-01-17 09:09:13] 2026-01-17 14:08:28,343 | INFO     | sizes: {0: 2283725, 1: 2283980, 4: 2284242, 11: 2284270, 3481: 2309986, 3483: 2318984, 3486: 2319168, 3491: 2319422}
[2026-01-17 09:09:13] 2026-01-17 14:08:28,343 | INFO     | --------------------------------------------------
[2026-01-17 09:09:13] 2026-01-17 14:08:28,343 | INFO     | 
[2026-01-17 09:09:13] 2026-01-17 14:08:28,344 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-17 09:09:13] 2026-01-17 14:08:28,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-17 09:09:13] 2026-01-17 14:08:28,370 | INFO     | job 6970395782 has completed (purged errors)
[2026-01-17 09:09:13] 2026-01-17 14:08:28,370 | INFO     | overall cleanup function is called
[2026-01-17 09:09:13] 2026-01-17 14:08:29,378 | INFO     | --- collectZombieJob: --- 10, [7639]
[2026-01-17 09:09:13] 2026-01-17 14:08:29,378 | INFO     | zombie collector waiting for pid 7639
[2026-01-17 09:09:13] 2026-01-17 14:08:29,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-17 09:09:13] 2026-01-17 14:08:29,378 | INFO     | collected zombie processes
[2026-01-17 09:09:13] 2026-01-17 14:08:29,379 | INFO     | will attempt to kill all subprocesses of pid=7639
[2026-01-17 09:09:13] 2026-01-17 14:08:29,553 | INFO     | process IDs to be killed: [7639] (in reverse order)
[2026-01-17 09:09:13] 2026-01-17 14:08:29,608 | WARNING  | found no corresponding commands to process id(s)
[2026-01-17 09:09:13] 2026-01-17 14:08:29,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-17 09:09:13] 2026-01-17 14:08:29,614 | INFO     | did not find any defunct processes belonging to 7639
[2026-01-17 09:09:13] 2026-01-17 14:08:29,619 | INFO     | did not find any defunct processes belonging to 7639
[2026-01-17 09:09:13] 2026-01-17 14:08:29,619 | INFO     | ready for new job
[2026-01-17 09:09:13] 2026-01-17 14:08:29,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-17 09:09:13] 2026-01-17 14:08:29,621 | INFO     | ***************************************
[2026-01-17 09:09:13] 2026-01-17 14:08:29,621 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-17 09:09:13] 2026-01-17 14:08:29,621 | INFO     | ***************************************
[2026-01-17 09:09:13] 2026-01-17 14:08:29,621 | INFO     | 
[2026-01-17 09:09:13] 2026-01-17 14:08:29,623 | INFO     | architecture information:
[2026-01-17 09:09:13] 2026-01-17 14:08:29,623 | INFO     | executing command: cat /etc/os-release
[2026-01-17 09:09:13] 2026-01-17 14:08:29,643 | INFO     | cat /etc/os-release:
[2026-01-17 09:09:13] NAME="CentOS Linux"
[2026-01-17 09:09:13] VERSION="7 (Core)"
[2026-01-17 09:09:13] ID="centos"
[2026-01-17 09:09:13] ID_LIKE="rhel fedora"
[2026-01-17 09:09:13] VERSION_ID="7"
[2026-01-17 09:09:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-17 09:09:13] ANSI_COLOR="0;31"
[2026-01-17 09:09:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-17 09:09:13] HOME_URL="https://www.centos.org/"
[2026-01-17 09:09:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-17 09:09:13] 
[2026-01-17 09:09:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-17 09:09:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-17 09:09:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-17 09:09:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-17 09:09:13] 
[2026-01-17 09:09:13] 2026-01-17 14:08:29,643 | INFO     | ***************************************
[2026-01-17 09:09:13] 2026-01-17 14:08:30,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-17 09:09:13] 2026-01-17 14:08:30,169 | INFO     | sufficient remaining disk space (105852698624 B)
[2026-01-17 09:09:13] 2026-01-17 14:08:30,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-17 09:09:13] 2026-01-17 14:08:30,170 | INFO     | current server update state: UPDATING_FINAL
[2026-01-17 09:09:13] 2026-01-17 14:08:30,170 | INFO     | update_server=False
[2026-01-17 09:09:13] 2026-01-17 14:08:30,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-17 09:09:13] 2026-01-17 14:08:30,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-17 09:09:13] 2026-01-17 14:08:30,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-17 09:09:13] 2026-01-17 14:08:30,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-17 09:09:13] 2026-01-17 14:08:30,299 | INFO     | aborting loop
[2026-01-17 09:09:13] 2026-01-17 14:08:30,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-17 09:09:13] 2026-01-17 14:08:30,822 | INFO     | all job control threads have been joined
[2026-01-17 09:09:13] 2026-01-17 14:08:31,176 | INFO     | [job] retrieve thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,177 | INFO     | [job] queue monitor thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,210 | INFO     | all data control threads have been joined
[2026-01-17 09:09:13] 2026-01-17 14:08:31,261 | INFO     | all payload control threads have been joined
[2026-01-17 09:09:13] 2026-01-17 14:08:31,302 | INFO     | [job] job monitor thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,360 | INFO     | [payload] execute_payloads thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,828 | INFO     | [job] control thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,884 | INFO     | [payload] failed_post thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:31,944 | INFO     | [job] validate thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,216 | INFO     | [data] control thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,262 | INFO     | [job] create_data_payload thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,266 | INFO     | [payload] control thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,401 | INFO     | [payload] validate_post thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,469 | INFO     | [payload] validate_pre thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,601 | INFO     | [data] copytool_in thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:32,758 | INFO     | [data] copytool_out thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:08:34,177 | INFO     | [data] queue_monitor thread has finished
[2026-01-17 09:09:13] 2026-01-17 14:09:00,194 | INFO     | PID=47923 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-17 09:09:13] 2026-01-17 14:09:00,194 | INFO     | found 0 job(s) in 20 queues
[2026-01-17 09:09:13] 2026-01-17 14:09:00,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-17 09:09:13] 2026-01-17 14:09:00,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-17 09:09:13] 2026-01-17 14:09:06,875 | INFO     | [monitor] cgroup control has ended
[2026-01-17 09:09:13] 2026-01-17 14:09:07,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640731752256)>', '<ExcThread(monitor, started 139640300357376)>']
[2026-01-17 09:09:13] 2026-01-17 14:09:08,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-17 09:09:13] 2026-01-17 14:09:08,235 | INFO     | [monitor] control thread has ended
[2026-01-17 09:09:13] 2026-01-17 14:09:12,813 | INFO     | all workflow threads have been joined
[2026-01-17 09:09:13] 2026-01-17 14:09:12,813 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-17 09:09:13] 2026-01-17 14:09:12,813 | INFO     | traces error code: 0
[2026-01-17 09:09:13] 2026-01-17 14:09:12,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-17 09:09:13] 2026-01-17 14:09:12,927 [wrapper] ==== pilot stdout END ====
[2026-01-17 09:09:13] 2026-01-17 14:09:12,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-17 09:09:13] 2026-01-17 14:09:12,936 [wrapper] pilotpid: 47923
[2026-01-17 09:09:13] 2026-01-17 14:09:12,940 [wrapper] Pilot exit status: 0
[2026-01-17 09:09:13] 2026-01-17 14:09:12,952 [wrapper] pandaids: 6970395782
[2026-01-17 09:09:13] 2026-01-17 14:09:13,006 [wrapper] cleanup supervisor_pilot 43420 47924
[2026-01-17 09:09:13] 2026-01-17 14:09:13,009 [wrapper] Test setup, not cleaning
[2026-01-17 09:09:13] 2026-01-17 14:09:13,013 [wrapper] apfmon messages muted
[2026-01-17 09:09:13] 2026-01-17 14:09:13,016 [wrapper] ==== wrapper stdout END ====
[2026-01-17 09:09:13] 2026-01-17 14:09:13,019 [wrapper] ==== wrapper stderr END ====
[2026-01-17 09:09:13]  *** Error codes and diagnostics ***
[2026-01-17 09:09:13]     "exeErrorCode": 0,
[2026-01-17 09:09:13]     "exeErrorDiag": "",
[2026-01-17 09:09:13]     "pilotErrorCode": 0,
[2026-01-17 09:09:13]     "pilotErrorDiag": "",
[2026-01-17 09:09:13]  *** Listing of results directory ***
[2026-01-17 09:09:13] total 727624
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-17 09:09:13] -rwx------ 1 boincer umatlas     36322 Jan 15 01:55 runpilot2-wrapper.sh
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas       100 Jan 17 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-17 09:09:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan 17 08:09 run_atlas
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas       105 Jan 17 08:09 job.xml
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas 592241217 Jan 17 08:09 EVNT.32794306._001855.pool.root.1
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 17 08:09 start_atlas.sh
[2026-01-17 09:09:13] drwxrwx--x 2 boincer umatlas      4096 Jan 17 08:09 shared
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas    592410 Jan 17 08:09 input.tar.gz
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas         0 Jan 17 08:09 boinc_lockfile
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas      2509 Jan 17 08:09 pandaJob.out
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas        57 Jan 17 08:09 setup.sh.local
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas   1004099 Jan 17 08:09 agis_schedconf.cvmfs.json
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas   1516246 Jan 17 08:10 agis_ddmendpoints.agis.ALL.json
[2026-01-17 09:09:13] drwx------ 5 boincer umatlas      4096 Jan 17 08:10 pilot3
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas      6035 Jan 17 09:03 init_data.xml
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas       530 Jan 17 09:07 boinc_task_state.xml
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas 147248450 Jan 17 09:07 HITS.48215263._047794.pool.root.1
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas      1043 Jan 17 09:08 memory_monitor_summary.json
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas    305440 Jan 17 09:08 log.48215263._047794.job.log.tgz.1
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas      7824 Jan 17 09:08 heartbeat.json
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas        27 Jan 17 09:08 wrapper_checkpoint.txt
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas      8192 Jan 17 09:08 boinc_mmap_file
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas        95 Jan 17 09:09 pilot_heartbeat.json
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas      4747 Jan 17 09:09 pilotlog.txt
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas    523129 Jan 17 09:09 log.48215263._047794.job.log.1
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas       357 Jan 17 09:09 output.list
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas       620 Jan 17 09:09 runtime_log
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas    849920 Jan 17 09:09 result.tar.gz
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas      9332 Jan 17 09:09 runtime_log.err
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas       655 Jan 17 09:09 507MDmnRW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWYuKDmL3gb2n.diag
[2026-01-17 09:09:13] -rw-r--r-- 1 boincer umatlas     22793 Jan 17 09:09 stderr.txt
[2026-01-17 09:09:13] HITS file was successfully produced:
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas 147248450 Jan 17 09:07 shared/HITS.pool.root.1
[2026-01-17 09:09:13]  *** Contents of shared directory: ***
[2026-01-17 09:09:13] total 723600
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas 592241217 Jan 17 08:09 ATLAS.root_0
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas     15847 Jan 17 08:09 start_atlas.sh
[2026-01-17 09:09:13] -rw-r--r-- 2 boincer umatlas    592410 Jan 17 08:09 input.tar.gz
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas 147248450 Jan 17 09:07 HITS.pool.root.1
[2026-01-17 09:09:13] -rw------- 1 boincer umatlas    849920 Jan 17 09:09 result.tar.gz
09:09:14 (44243): run_atlas exited; CPU time 25559.217274
09:09:14 (44243): called boinc_finish(0)

</stderr_txt>
]]>

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