Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:31:05 (295524): wrapper (7.7.26015): starting
07:31:05 (295524): wrapper: running run_atlas (--nthreads 9)
[2026-01-17 07:31:05] Arguments: --nthreads 9
[2026-01-17 07:31:05] Threads: 9
[2026-01-17 07:31:05] Checking for CVMFS
[2026-01-17 07:31:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-17 07:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-17 07:31:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-17 07:31:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-17 07:31:06] 2.13.3.0 12210 33801 92048 155243 0 319 31015344 40960001 28028 16776704 0 167930862 99.775 102800043 48212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-17 07:31:06] CVMFS is ok
[2026-01-17 07:31:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-17 07:31:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-17 07:31:06] Further information can be found at the LHC@home message board.
[2026-01-17 07:31:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-17 07:31:06] Checking for apptainer binary...
[2026-01-17 07:31:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-17 07:31:06] Running /usr/bin/apptainer --version
[2026-01-17 07:31:06] apptainer version 1.4.5-2.el9
[2026-01-17 07:31:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-17 07:31:06] c-208-37.aglt2.org
[2026-01-17 07:31:06] apptainer works
[2026-01-17 07:31:06] Set ATHENA_PROC_NUMBER=9
[2026-01-17 07:31:06] Set ATHENA_CORE_NUMBER=9
[2026-01-17 07:31:06] Starting ATLAS job with PandaID=6963156673
[2026-01-17 07:31:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-17 08:54:34]  *** The last 200 lines of the pilot log: ***
[2026-01-17 08:54:34]  status=None
[2026-01-17 08:54:34]  status_code=0
[2026-01-17 08:54:34]  storage_token=
[2026-01-17 08:54:34]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6963156673/log.47898826._031822.job.log.tgz.1
[2026-01-17 08:54:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/95/log.47898826._031822.job.log.tgz.1
[2026-01-17 08:54:34]  workdir=None
[2026-01-17 08:54:34] ]
[2026-01-17 08:54:34] 2026-01-17 13:53:43,335 | INFO     | transferring file log.47898826._031822.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6963156673/log.47898826._031822.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-17 08:54:34] 2026-01-17 13:53:43,335 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6963156673/log.47898826._031822.job.log.tgz.1 /tmp/boinchome/slots/1/log.47898826._031822.job
[2026-01-17 08:54:34] 2026-01-17 13:53:43,356 | INFO     | adding to output.list: log.47898826._031822.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/95/log.47898826._031822.job.log.tg
[2026-01-17 08:54:34] 2026-01-17 13:53:43,359 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-17 08:54:34] 2026-01-17 13:53:43,359 | INFO     | summary of transferred files:
[2026-01-17 08:54:34] 2026-01-17 13:53:43,359 | INFO     |  -- lfn=log.47898826._031822.job.log.tgz.1, status_code=0, status=transferred
[2026-01-17 08:54:34] 2026-01-17 13:53:43,359 | INFO     | stage-out finished correctly
[2026-01-17 08:54:34] 2026-01-17 13:53:43,413 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-17 08:54:34] 2026-01-17 13:53:44,022 | INFO     | monitor loop #317: job 0:6963156673 is in state 'finished'
[2026-01-17 08:54:34] 2026-01-17 13:53:44,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 08:54:34] 2026-01-17 13:53:44,549 | INFO     | PID=301833 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-17 08:54:34] 2026-01-17 13:53:44,549 | INFO     | .. there are 24 such processes running
[2026-01-17 08:54:34] 2026-01-17 13:53:45,550 | INFO     | time since job start (4946s) is within the limit (349056.0s)
[2026-01-17 08:54:34] 2026-01-17 13:53:46,393 | INFO     | job 6963156673 has state=finished
[2026-01-17 08:54:34] 2026-01-17 13:53:46,393 | INFO     | preparing for final server update for job 6963156673 in state='finished'
[2026-01-17 08:54:34] 2026-01-17 13:53:46,394 | INFO     | this job has now completed (state=finished)
[2026-01-17 08:54:34] 2026-01-17 13:53:46,394 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-17 08:54:34] 2026-01-17 13:53:46,394 | INFO     | log transfer has been attempted: DONE
[2026-01-17 08:54:34] 2026-01-17 13:53:46,395 | INFO     | job 6963156673 has finished - writing final server update
[2026-01-17 08:54:34] 2026-01-17 13:53:46,395 | INFO     | total number of processed events: 400 (read)
[2026-01-17 08:54:34] 2026-01-17 13:53:46,414 | INFO     | executing command: lscpu
[2026-01-17 08:54:34] 2026-01-17 13:53:46,527 | INFO     | monitor loop #318: job 0:6963156673 is in state 'finished'
[2026-01-17 08:54:34] 2026-01-17 13:53:46,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 08:54:34] 2026-01-17 13:53:46,537 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-17 08:54:34] 2026-01-17 13:53:47,561 | INFO     | time since job start (4948s) is within the limit (349056.0s)
[2026-01-17 08:54:34] 2026-01-17 13:53:49,037 | INFO     | monitor loop #319: job 0:6963156673 is in state 'finished'
[2026-01-17 08:54:34] 2026-01-17 13:53:49,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 08:54:34] 2026-01-17 13:53:49,568 | INFO     | time since job start (4950s) is within the limit (349056.0s)
[2026-01-17 08:54:34] 2026-01-17 13:53:51,543 | INFO     | monitor loop #320: job 0:6963156673 is in state 'finished'
[2026-01-17 08:54:34] 2026-01-17 13:53:51,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 08:54:34] 2026-01-17 13:53:51,575 | INFO     | time since job start (4952s) is within the limit (349056.0s)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,365 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-17 08:54:34] 2026-01-17 13:53:53,372 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3720.2721796875
[2026-01-17 08:54:34] 2026-01-17 13:53:53,389 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963156673/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,390 | INFO     | extracted standard info from prmon json
[2026-01-17 08:54:34] 2026-01-17 13:53:53,390 | INFO     | extracted standard memory fields from prmon json
[2026-01-17 08:54:34] 2026-01-17 13:53:53,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-17 08:54:34] 2026-01-17 13:53:53,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-17 08:54:34] 2026-01-17 13:53:53,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-17 08:54:34] 2026-01-17 13:53:53,392 | INFO     | fitting pss+swap vs Time
[2026-01-17 08:54:34] 2026-01-17 13:53:53,392 | INFO     | sum of square deviations: 125630262.5
[2026-01-17 08:54:34] 2026-01-17 13:53:53,396 | INFO     | sum of deviations: -7616031810.499998
[2026-01-17 08:54:34] 2026-01-17 13:53:53,396 | INFO     | mean x: 1768655640.5
[2026-01-17 08:54:34] 2026-01-17 13:53:53,396 | INFO     | mean y: 2666936.878378378
[2026-01-17 08:54:34] 2026-01-17 13:53:53,396 | INFO     | intersect: 107223151490.65576
[2026-01-17 08:54:34] 2026-01-17 13:53:53,396 | INFO     | chi2: 0.03573350128850611
[2026-01-17 08:54:34] 2026-01-17 13:53:53,397 | INFO     | current memory leak: -60.62 B/s (using 74 data points, chi2=0.04)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,397 | INFO     | could have reported an average CPU frequency of 3756 MHz (6 samples)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | ..............................
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . Timing measurements:
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . get job = 0 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . initial setup = 2 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . payload setup = 6 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . stage-in = 0 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . payload execution = 4915 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . stage-out = 0 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | . log creation = 0 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,401 | INFO     | ..............................
[2026-01-17 08:54:34] 2026-01-17 13:53:53,479 | INFO     | 
[2026-01-17 08:54:34] 2026-01-17 13:53:53,480 | INFO     | job summary report
[2026-01-17 08:54:34] 2026-01-17 13:53:53,480 | INFO     | --------------------------------------------------
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | PanDA job id: 6963156673
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | task id: 47898826
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | errors: (none)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | pilot state: finished 
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | transexitcode: 0
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | exeerrorcode: 0
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | exeerrordiag: 
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | exitcode: 0
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | exitmsg: OK
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | cpuconsumptiontime: 34735 s
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | nevents: 400
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | neventsw: 0
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | pid: 319391
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | pgrp: 319391
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | corecount: 9
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | event service: False
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | sizes: {0: 2283971, 1: 2283999, 6: 2284261, 11: 2284289, 4926: 2310582, 4927: 2319764, 4937: 2319902}
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | --------------------------------------------------
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | 
[2026-01-17 08:54:34] 2026-01-17 13:53:53,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-17 08:54:34] 2026-01-17 13:53:53,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | job 6963156673 has completed (purged errors)
[2026-01-17 08:54:34] 2026-01-17 13:53:53,546 | INFO     | overall cleanup function is called
[2026-01-17 08:54:34] 2026-01-17 13:53:54,558 | INFO     | --- collectZombieJob: --- 10, [319391]
[2026-01-17 08:54:34] 2026-01-17 13:53:54,559 | INFO     | zombie collector waiting for pid 319391
[2026-01-17 08:54:34] 2026-01-17 13:53:54,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-17 08:54:34] 2026-01-17 13:53:54,559 | INFO     | collected zombie processes
[2026-01-17 08:54:34] 2026-01-17 13:53:54,559 | INFO     | will attempt to kill all subprocesses of pid=319391
[2026-01-17 08:54:34] 2026-01-17 13:53:54,986 | INFO     | process IDs to be killed: [319391] (in reverse order)
[2026-01-17 08:54:34] 2026-01-17 13:53:55,173 | WARNING  | found no corresponding commands to process id(s)
[2026-01-17 08:54:34] 2026-01-17 13:53:55,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-17 08:54:34] 2026-01-17 13:53:55,199 | INFO     | did not find any defunct processes belonging to 319391
[2026-01-17 08:54:34] 2026-01-17 13:53:55,228 | INFO     | did not find any defunct processes belonging to 319391
[2026-01-17 08:54:34] 2026-01-17 13:53:55,228 | INFO     | ready for new job
[2026-01-17 08:54:34] 2026-01-17 13:53:55,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-17 08:54:34] 2026-01-17 13:53:55,232 | INFO     | ***************************************
[2026-01-17 08:54:34] 2026-01-17 13:53:55,233 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-17 08:54:34] 2026-01-17 13:53:55,233 | INFO     | ***************************************
[2026-01-17 08:54:34] 2026-01-17 13:53:55,233 | INFO     | 
[2026-01-17 08:54:34] 2026-01-17 13:53:55,238 | INFO     | architecture information:
[2026-01-17 08:54:34] 2026-01-17 13:53:55,238 | INFO     | executing command: cat /etc/os-release
[2026-01-17 08:54:34] 2026-01-17 13:53:55,276 | INFO     | cat /etc/os-release:
[2026-01-17 08:54:34] NAME="CentOS Linux"
[2026-01-17 08:54:34] VERSION="7 (Core)"
[2026-01-17 08:54:34] ID="centos"
[2026-01-17 08:54:34] ID_LIKE="rhel fedora"
[2026-01-17 08:54:34] VERSION_ID="7"
[2026-01-17 08:54:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-17 08:54:34] ANSI_COLOR="0;31"
[2026-01-17 08:54:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-17 08:54:34] HOME_URL="https://www.centos.org/"
[2026-01-17 08:54:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-17 08:54:34] 
[2026-01-17 08:54:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-17 08:54:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-17 08:54:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-17 08:54:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-17 08:54:34] 
[2026-01-17 08:54:34] 2026-01-17 13:53:55,277 | INFO     | ***************************************
[2026-01-17 08:54:34] 2026-01-17 13:53:55,781 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-17 08:54:34] 2026-01-17 13:53:55,829 | INFO     | sufficient remaining disk space (173655719936 B)
[2026-01-17 08:54:34] 2026-01-17 13:53:55,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-17 08:54:34] 2026-01-17 13:53:55,830 | INFO     | current server update state: UPDATING_FINAL
[2026-01-17 08:54:34] 2026-01-17 13:53:55,830 | INFO     | update_server=False
[2026-01-17 08:54:34] 2026-01-17 13:53:55,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-17 08:54:34] 2026-01-17 13:53:55,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-17 08:54:34] 2026-01-17 13:53:55,831 | INFO     | aborting loop
[2026-01-17 08:54:34] 2026-01-17 13:53:56,025 | INFO     | all payload control threads have been joined
[2026-01-17 08:54:34] 2026-01-17 13:53:56,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-17 08:54:34] 2026-01-17 13:53:56,836 | INFO     | [job] retrieve thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:56,837 | INFO     | all data control threads have been joined
[2026-01-17 08:54:34] 2026-01-17 13:53:56,838 | INFO     | [job] job monitor thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:56,912 | INFO     | [payload] failed_post thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:57,031 | INFO     | [payload] control thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:57,132 | INFO     | all job control threads have been joined
[2026-01-17 08:54:34] 2026-01-17 13:53:57,314 | INFO     | [data] copytool_in thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:57,633 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:57,639 | INFO     | [payload] validate_post thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:57,843 | INFO     | [data] control thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,061 | INFO     | [job] create_data_payload thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,132 | INFO     | [payload] validate_pre thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,138 | INFO     | [job] control thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,169 | INFO     | [payload] execute_payloads thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,234 | INFO     | [job] validate thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,455 | INFO     | [data] copytool_out thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:53:58,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-17 08:54:34] 2026-01-17 13:53:58,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-17 08:54:34] 2026-01-17 13:53:59,497 | INFO     | [job] queue monitor thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:54:02,506 | INFO     | [data] queue_monitor thread has finished
[2026-01-17 08:54:34] 2026-01-17 13:54:25,179 | INFO     | PID=301833 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-17 08:54:34] 2026-01-17 13:54:25,179 | INFO     | .. there are 24 such processes running
[2026-01-17 08:54:34] 2026-01-17 13:54:25,180 | INFO     | found 0 job(s) in 20 queues
[2026-01-17 08:54:34] 2026-01-17 13:54:25,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-17 08:54:34] 2026-01-17 13:54:25,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-17 08:54:34] 2026-01-17 13:54:27,584 | INFO     | [monitor] cgroup control has ended
[2026-01-17 08:54:34] 2026-01-17 13:54:29,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653922527040)>', '<ExcThread(monitor, started 139653562734336)>']
[2026-01-17 08:54:34] 2026-01-17 13:54:29,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-17 08:54:34] 2026-01-17 13:54:29,201 | INFO     | [monitor] control thread has ended
[2026-01-17 08:54:34] 2026-01-17 13:54:34,064 | INFO     | all workflow threads have been joined
[2026-01-17 08:54:34] 2026-01-17 13:54:34,067 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-17 08:54:34] 2026-01-17 13:54:34,067 | INFO     | traces error code: 0
[2026-01-17 08:54:34] 2026-01-17 13:54:34,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-17 08:54:34] 2026-01-17 13:54:34,226 [wrapper] ==== pilot stdout END ====
[2026-01-17 08:54:34] 2026-01-17 13:54:34,230 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-17 08:54:34] 2026-01-17 13:54:34,233 [wrapper] pilotpid: 301833
[2026-01-17 08:54:34] 2026-01-17 13:54:34,236 [wrapper] Pilot exit status: 0
[2026-01-17 08:54:34] 2026-01-17 13:54:34,247 [wrapper] pandaids: 6963156673
[2026-01-17 08:54:34] 2026-01-17 13:54:34,359 [wrapper] cleanup supervisor_pilot  582776 301834
[2026-01-17 08:54:34] 2026-01-17 13:54:34,362 [wrapper] Test setup, not cleaning
[2026-01-17 08:54:34] 2026-01-17 13:54:34,365 [wrapper] apfmon messages muted
[2026-01-17 08:54:34] 2026-01-17 13:54:34,368 [wrapper] ==== wrapper stdout END ====
[2026-01-17 08:54:34] 2026-01-17 13:54:34,371 [wrapper] ==== wrapper stderr END ====
[2026-01-17 08:54:34]  *** Error codes and diagnostics ***
[2026-01-17 08:54:34]     "exeErrorCode": 0,
[2026-01-17 08:54:34]     "exeErrorDiag": "",
[2026-01-17 08:54:34]     "pilotErrorCode": 0,
[2026-01-17 08:54:34]     "pilotErrorDiag": "",
[2026-01-17 08:54:34]  *** Listing of results directory ***
[2026-01-17 08:54:34] total 446480
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-17 08:54:34] -rwx------. 1 boincer umatlas     36322 Jan  8 16:48 runpilot2-wrapper.sh
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas       100 Jan 17 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-17 08:54:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 17 07:31 run_atlas
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas       105 Jan 17 07:31 job.xml
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas 225645848 Jan 17 07:31 EVNT.47898824._001208.pool.root.1
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas     15847 Jan 17 07:31 start_atlas.sh
[2026-01-17 08:54:34] drwxrwx--x. 2 boincer umatlas      4096 Jan 17 07:31 shared
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas    592399 Jan 17 07:31 input.tar.gz
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas         0 Jan 17 07:31 boinc_lockfile
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas      2520 Jan 17 07:31 pandaJob.out
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas        57 Jan 17 07:31 setup.sh.local
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas   1004099 Jan 17 07:31 agis_schedconf.cvmfs.json
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas   1516246 Jan 17 07:31 agis_ddmendpoints.agis.ALL.json
[2026-01-17 08:54:34] drwx------. 5 boincer umatlas      4096 Jan 17 07:31 pilot3
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas      7184 Jan 17 08:47 init_data.xml
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas 225545352 Jan 17 08:53 HITS.47898826._031822.pool.root.1
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas       529 Jan 17 08:53 boinc_task_state.xml
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas      1031 Jan 17 08:53 memory_monitor_summary.json
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas    358767 Jan 17 08:53 log.47898826._031822.job.log.tgz.1
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas      7782 Jan 17 08:53 heartbeat.json
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas        95 Jan 17 08:54 pilot_heartbeat.json
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas      8192 Jan 17 08:54 boinc_mmap_file
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas        27 Jan 17 08:54 wrapper_checkpoint.txt
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas      4824 Jan 17 08:54 pilotlog.txt
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas    678468 Jan 17 08:54 log.47898826._031822.job.log.1
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas       357 Jan 17 08:54 output.list
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas       620 Jan 17 08:54 runtime_log
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas   1054720 Jan 17 08:54 result.tar.gz
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas      9342 Jan 17 08:54 runtime_log.err
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas       652 Jan 17 08:54 fXCNDmL3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjalKDmfJwIXo.diag
[2026-01-17 08:54:34] -rw-r--r--. 1 boincer umatlas     22155 Jan 17 08:54 stderr.txt
[2026-01-17 08:54:34] HITS file was successfully produced:
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas 225545352 Jan 17 08:53 shared/HITS.pool.root.1
[2026-01-17 08:54:34]  *** Contents of shared directory: ***
[2026-01-17 08:54:34] total 442252
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas 225645848 Jan 17 07:31 ATLAS.root_0
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas     15847 Jan 17 07:31 start_atlas.sh
[2026-01-17 08:54:34] -rw-r--r--. 2 boincer umatlas    592399 Jan 17 07:31 input.tar.gz
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas 225545352 Jan 17 08:53 HITS.pool.root.1
[2026-01-17 08:54:34] -rw-------. 1 boincer umatlas   1054720 Jan 17 08:54 result.tar.gz
08:54:35 (295524): run_atlas exited; CPU time 34886.952197
08:54:35 (295524): called boinc_finish(0)

</stderr_txt>
]]>

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