Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-17 23:55:13 (21204): vboxwrapper version 26210
2026-01-17 23:55:13 (21204): BOINC client version: 8.2.8
2026-01-17 23:55:14 (21204): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-17 23:55:14 (21204): Successfully copied 'init_data.xml' to the shared directory.
2026-01-17 23:55:15 (21204): Create VM. (boinc_9c286e0b16a2f8ae, slot#15)
2026-01-17 23:55:15 (21204): Setting Memory Size for VM. (4096MB)
2026-01-17 23:55:15 (21204): Setting CPU Count for VM. (1)
2026-01-17 23:55:16 (21204): Setting Chipset Options for VM.
2026-01-17 23:55:16 (21204): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-17 23:55:16 (21204): Setting Boot Options for VM.
2026-01-17 23:55:17 (21204): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-17 23:55:17 (21204): Enabling VM Network Access.
2026-01-17 23:55:17 (21204): Disabling USB Support for VM.
2026-01-17 23:55:17 (21204): Disabling COM Port Support for VM.
2026-01-17 23:55:18 (21204): Disabling LPT Port Support for VM.
2026-01-17 23:55:18 (21204): Disabling Audio Support for VM.
2026-01-17 23:55:18 (21204): Disabling Clipboard Support for VM.
2026-01-17 23:55:18 (21204): Disabling Drag and Drop Support for VM.
2026-01-17 23:55:19 (21204): Adding storage controller(s) to VM.
2026-01-17 23:55:19 (21204): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-17 23:55:19 (21204): Adding VirtualBox Guest Additions to VM.
2026-01-17 23:55:20 (21204): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-17 23:55:20 (21204): forwarding host port 50982 to guest port 80
2026-01-17 23:55:20 (21204): Enabling remote desktop for VM.
2026-01-17 23:55:21 (21204): Enabling shared directory for VM.
2026-01-17 23:55:21 (21204): Starting VM using VBoxManage interface. (boinc_9c286e0b16a2f8ae, slot#15)
2026-01-17 23:55:25 (21204): Successfully started VM. (PID = '39420')
2026-01-17 23:55:25 (21204): Reporting VM Process ID to BOINC.
2026-01-17 23:55:25 (21204): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-17 23:55:25 (21204): Guest Log: CPUID EDX: 0x178bfbff
2026-01-17 23:55:25 (21204): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-17 23:55:25 (21204): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-17 23:55:25 (21204): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-17 23:55:25 (21204): Detected: Web Application Enabled (http://localhost:50982)
2026-01-17 23:55:25 (21204): Detected: Remote Desktop Enabled (localhost:50136)
2026-01-17 23:55:25 (21204): Preference change detected
2026-01-17 23:55:25 (21204): Setting CPU throttle for VM. (100%)
2026-01-17 23:55:26 (21204): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-17 23:55:27 (21204): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-17 23:55:27 (21204): Guest Log: BIOS: Booting from Hard Disk...
2026-01-17 23:55:29 (21204): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-17 23:55:29 (21204): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-17 23:55:29 (21204): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-17 23:55:32 (21204): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-17 23:55:32 (21204): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-17 23:55:36 (21204): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000075 main     Log opened 2026-01-17T23:55:34.833613000Z
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000166 main     OS Product: Linux
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000179 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000188 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000198 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000198 main     Process ID: 1242
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2026-01-17 23:55:36 (21204): Guest Log: 00:00:00.001019 main     5.2.32 r132073 started. Verbose level = 0
2026-01-17 23:55:36 (21204): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-17 23:55:36 (21204): Guest Log: [INFO] Mounting shared directory
2026-01-17 23:55:36 (21204): Guest Log: [INFO] Checking for init_data.xml
2026-01-17 23:55:40 (21204): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-17 23:55:40 (21204): Guest Log: [INFO] Detected branch: prod
2026-01-17 23:55:40 (21204): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-17 23:55:40 (21204): Guest Log: Copying input files
2026-01-17 23:55:41 (21204): Guest Log: Copied input files into RunAtlas.
2026-01-17 23:55:41 (21204): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-17 23:55:46 (21204): Guest Log: 00:00:10.008954 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 192 817 000ns (GuestNow=1 768 690 546 649 312 000 ns GuestLast=1 768 694 134 842 129 000 ns fSetTimeLastLoop=true )
2026-01-17 23:55:49 (21204): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-17 23:55:49 (21204): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-17 23:55:49 (21204): Guest Log: 2.6.3.0 1513 0 29528 155257 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-17 23:55:49 (21204): Guest Log: copied the webapp to /var/www
2026-01-17 23:55:49 (21204): Guest Log: core_number=1
2026-01-17 23:55:49 (21204): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-17 23:55:49 (21204): Guest Log:  *** Starting ATLAS job. (PandaID=6963161512 taskID=47898826) ***
2026-01-18 00:00:28 (21204): VM state change detected. (old = 'running', new = 'paused')
2026-01-18 02:09:51 (21204): VM state change detected. (old = 'paused', new = 'running')
2026-01-18 02:10:00 (21204): Guest Log: 00:05:00.135840 timesync vgsvcTimeSyncWorker: Radical host time change: 7 766 652 000 000ns (HostNow=1 768 698 582 058 000 000 ns HostLast=1 768 690 815 406 000 000 ns)
2026-01-18 02:10:10 (21204): Guest Log: 00:05:10.136189 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 755 282 121 000ns (GuestNow=1 768 698 592 058 348 000 ns GuestLast=1 768 690 836 776 227 000 ns fSetTimeLastLoop=true )
2026-01-18 03:44:53 (21204): Status Report: Elapsed Time: '6000.000000'
2026-01-18 03:44:53 (21204): Status Report: CPU Time: '5942.281250'
2026-01-18 05:24:56 (21204): Status Report: Elapsed Time: '12000.000000'
2026-01-18 05:24:56 (21204): Status Report: CPU Time: '11926.546875'
2026-01-18 07:04:59 (21204): Status Report: Elapsed Time: '18000.000000'
2026-01-18 07:04:59 (21204): Status Report: CPU Time: '17910.968750'
2026-01-18 08:45:24 (21204): Status Report: Elapsed Time: '24000.000000'
2026-01-18 08:45:24 (21204): Status Report: CPU Time: '23895.140625'
2026-01-18 10:25:27 (21204): Status Report: Elapsed Time: '30000.000000'
2026-01-18 10:25:27 (21204): Status Report: CPU Time: '29877.140625'
2026-01-18 10:31:30 (21204): Guest Log:  *** Job finished ***
2026-01-18 10:31:30 (21204): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:46,243 | INFO     | all workflow threads have been joined
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:46,244 | INFO     | end of generic workflow (traces error code: 0)
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:46,244 | INFO     | traces error code: 0
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:46,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | INFO     | PID=5842 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | INFO     | found 0 job(s) in 20 queues
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,899 | INFO     | [monitor] control thread has ended
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:47,998 [wrapper] ==== pilot stdout END ====
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,000 [wrapper] ==== wrapper stdout RESUME ====
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,001 [wrapper] pilotpid: 5842
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,003 [wrapper] Pilot exit status: 0
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,041 [wrapper] pandaids: 6963161512
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,052 [wrapper] cleanup supervisor_pilot  9316 5843
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,054 [wrapper] Test setup, not cleaning
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,055 [wrapper] apfmon messages muted
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,057 [wrapper] ==== wrapper stdout END ====
2026-01-18 10:31:30 (21204): Guest Log: 2026-01-18 09:30:48,058 [wrapper] ==== wrapper stderr END ====
2026-01-18 10:31:30 (21204): Guest Log:  *** Error codes and diagnostics ***
2026-01-18 10:31:30 (21204): Guest Log:     "exeErrorCode": 0,
2026-01-18 10:31:30 (21204): Guest Log:     "exeErrorDiag": "",
2026-01-18 10:31:30 (21204): Guest Log:     "pilotErrorCode": 0,
2026-01-18 10:31:30 (21204): Guest Log:     "pilotErrorDiag": "",
2026-01-18 10:31:30 (21204): Guest Log:  *** Listing of results directory ***
2026-01-18 10:31:30 (21204): Guest Log: total 223448
2026-01-18 10:31:30 (21204): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 21:44 pilot3.tar.gz
2026-01-18 10:31:30 (21204): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 21:46 runpilot2-wrapper.sh
2026-01-18 10:31:30 (21204): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 21:47 queuedata.json
2026-01-18 10:31:30 (21204): Guest Log: -rwxr-xr-x. 1 atlas atlas      9358 Jan 17 22:55 init_data.xml
2026-01-18 10:31:30 (21204): Guest Log: -rwxr-xr-x. 1 atlas atlas    592403 Jan 17 22:55 input.tar.gz
2026-01-18 10:31:30 (21204): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 17 22:55 start_atlas.sh
2026-01-18 10:31:30 (21204): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 17 22:55 EVNT.47898824._001283.pool.root.1 -> /data/./ATLAS.root_0
2026-01-18 10:31:30 (21204): Guest Log: -rw-r--r--. 1 atlas atlas      2517 Jan 17 22:55 pandaJob.out
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas        50 Jan 17 22:55 setup.sh.local
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas   1004157 Jan 17 22:56 agis_schedconf.cvmfs.json
2026-01-18 10:31:30 (21204): Guest Log: drwx------. 5 atlas atlas      4096 Jan 17 22:56 pilot3
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas 215422645 Jan 18 09:29 HITS.47898826._033174.pool.root.1
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas      1021 Jan 18 09:30 memory_monitor_summary.json
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 18 09:30 agis_ddmendpoints.agis.ALL.json
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas    569929 Jan 18 09:30 log.47898826._033174.job.log.tgz.1
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas      7802 Jan 18 09:30 heartbeat.json
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas        97 Jan 18 09:30 pilot_heartbeat.json
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas       744 Jan 18 09:30 pilotlog.txt
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas   4193163 Jan 18 09:30 log.47898826._033174.job.log.1
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas       357 Jan 18 09:30 output.list
2026-01-18 10:31:30 (21204): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 18 09:30 runtime_log
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas   4782080 Jan 18 09:30 result.tar.gz
2026-01-18 10:31:30 (21204): Guest Log: -rw-r--r--. 1 atlas atlas      9115 Jan 18 09:30 runtime_log.err
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas       658 Jan 18 09:30 5BeKDmG1Cy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcIgKDmQiE89n.diag
2026-01-18 10:31:30 (21204): Guest Log: Looking for outputfile HITS.47898826._033174.pool.root.1
2026-01-18 10:31:30 (21204): Guest Log: HITS file was successfully produced
2026-01-18 10:31:30 (21204): Guest Log: -rw-------. 1 atlas atlas 215422645 Jan 18 09:29 /home/atlas/RunAtlas/HITS.47898826._033174.pool.root.1
2026-01-18 10:31:30 (21204): Guest Log: Successfully finished the ATLAS job!
2026-01-18 10:31:30 (21204): Guest Log: Copying the results back to the shared directory!
2026-01-18 10:31:30 (21204): Guest Log:  *** Contents of shared directory: ***
2026-01-18 10:31:30 (21204): Guest Log: total 439316
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root 229027251 Jan 17 22:55 ATLAS.root_0
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root 215422645 Jan 18  2026 HITS.pool.root.1
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root      9358 Jan 17 22:55 init_data.xml
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root    592403 Jan 17 12:14 input.tar.gz
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root   4782080 Jan 18  2026 result.tar.gz
2026-01-18 10:31:30 (21204): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 17 12:14 start_atlas.sh
2026-01-18 10:31:30 (21204): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-18 10:31:30 (21204): VM Completion File Detected.
2026-01-18 10:31:30 (21204): Powering off VM.
2026-01-18 10:31:30 (21204): Successfully stopped VM.
2026-01-18 10:31:30 (21204): Deregistering VM. (boinc_9c286e0b16a2f8ae, slot#15)
2026-01-18 10:31:30 (21204): Removing network bandwidth throttle group from VM.
2026-01-18 10:31:31 (21204): Removing VM from VirtualBox.
2026-01-18 10:31:36 (21204): called boinc_finish(0)

</stderr_txt>
]]>

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