Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:28:53 (3658116): wrapper (7.7.26015): starting
21:28:53 (3658116): wrapper: running run_atlas (--nthreads 9)
[2026-01-16 21:28:53] Arguments: --nthreads 9
[2026-01-16 21:28:53] Threads: 9
[2026-01-16 21:28:53] Checking for CVMFS
[2026-01-16 21:28:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 21:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 21:28:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 21:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 21:28:55] 2.13.3.0 8759 32300 104624 155227 2 375 29692338 40960000 25336 16776704 0 200877005 99.697 154527646 47656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-16 21:28:55] CVMFS is ok
[2026-01-16 21:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 21:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 21:28:55] Further information can be found at the LHC@home message board.
[2026-01-16 21:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 21:28:55] Checking for apptainer binary...
[2026-01-16 21:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 21:28:55] Running /usr/bin/apptainer --version
[2026-01-16 21:28:56] apptainer version 1.4.5-2.el9
[2026-01-16 21:28:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 21:28:56] c-208-39.aglt2.org
[2026-01-16 21:28:56] apptainer works
[2026-01-16 21:28:56] Set ATHENA_PROC_NUMBER=9
[2026-01-16 21:28:56] Set ATHENA_CORE_NUMBER=9
[2026-01-16 21:28:57] Starting ATLAS job with PandaID=6963147366
[2026-01-16 21:28:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 23:03:33]  *** The last 200 lines of the pilot log: ***
[2026-01-16 23:03:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-16 23:03:33]  replicas=None
[2026-01-16 23:03:33]  scope=mc23_13p6TeV
[2026-01-16 23:03:33]  status=None
[2026-01-16 23:03:33]  status_code=0
[2026-01-16 23:03:33]  storage_token=
[2026-01-16 23:03:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963147366/log.47898826._027561.job.log.tgz.1
[2026-01-16 23:03:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/03/log.47898826._027561.job.log.tgz.1
[2026-01-16 23:03:33]  workdir=None
[2026-01-16 23:03:33] ]
[2026-01-16 23:03:33] 2026-01-17 04:02:37,155 | INFO     | transferring file log.47898826._027561.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963147366/log.47898826._027561.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-16 23:03:33] 2026-01-17 04:02:37,155 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963147366/log.47898826._027561.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._027561.job
[2026-01-16 23:03:33] 2026-01-17 04:02:37,191 | INFO     | adding to output.list: log.47898826._027561.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/03/log.47898826._027561.job.log.tg
[2026-01-16 23:03:33] 2026-01-17 04:02:37,192 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 23:03:33] 2026-01-17 04:02:37,192 | INFO     | summary of transferred files:
[2026-01-16 23:03:33] 2026-01-17 04:02:37,192 | INFO     |  -- lfn=log.47898826._027561.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 23:03:33] 2026-01-17 04:02:37,192 | INFO     | stage-out finished correctly
[2026-01-16 23:03:33] 2026-01-17 04:02:37,247 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 23:03:33] 2026-01-17 04:02:37,311 | INFO     | job 6963147366 has state=finished
[2026-01-16 23:03:33] 2026-01-17 04:02:37,312 | INFO     | preparing for final server update for job 6963147366 in state='finished'
[2026-01-16 23:03:33] 2026-01-17 04:02:37,312 | INFO     | this job has now completed (state=finished)
[2026-01-16 23:03:33] 2026-01-17 04:02:37,312 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 23:03:33] 2026-01-17 04:02:37,312 | INFO     | log transfer has been attempted: DONE
[2026-01-16 23:03:33] 2026-01-17 04:02:37,312 | INFO     | job 6963147366 has finished - writing final server update
[2026-01-16 23:03:33] 2026-01-17 04:02:37,313 | INFO     | total number of processed events: 400 (read)
[2026-01-16 23:03:33] 2026-01-17 04:02:37,316 | INFO     | executing command: lscpu
[2026-01-16 23:03:33] 2026-01-17 04:02:37,386 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 23:03:33] 2026-01-17 04:02:37,404 | INFO     | time since job start (5599s) is within the limit (349056.0s)
[2026-01-16 23:03:33] 2026-01-17 04:02:39,410 | INFO     | time since job start (5601s) is within the limit (349056.0s)
[2026-01-16 23:03:33] 2026-01-17 04:02:39,558 | INFO     | monitor loop #374: job 0:6963147366 is in state 'finished'
[2026-01-16 23:03:33] 2026-01-17 04:02:39,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 23:03:33] 2026-01-17 04:02:41,417 | INFO     | time since job start (5603s) is within the limit (349056.0s)
[2026-01-16 23:03:33] 2026-01-17 04:02:42,061 | INFO     | monitor loop #375: job 0:6963147366 is in state 'finished'
[2026-01-16 23:03:33] 2026-01-17 04:02:42,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 23:03:33] 2026-01-17 04:02:43,423 | INFO     | time since job start (5605s) is within the limit (349056.0s)
[2026-01-16 23:03:33] 2026-01-17 04:02:44,568 | INFO     | monitor loop #376: job 0:6963147366 is in state 'finished'
[2026-01-16 23:03:33] 2026-01-17 04:02:44,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 23:03:33] 2026-01-17 04:02:45,430 | INFO     | time since job start (5607s) is within the limit (349056.0s)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,185 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-16 23:03:33] 2026-01-17 04:02:46,190 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3743.685210937499
[2026-01-16 23:03:33] 2026-01-17 04:02:46,203 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963147366/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,204 | INFO     | extracted standard info from prmon json
[2026-01-16 23:03:33] 2026-01-17 04:02:46,204 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 23:03:33] 2026-01-17 04:02:46,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 23:03:33] 2026-01-17 04:02:46,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 23:03:33] 2026-01-17 04:02:46,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | fitting pss+swap vs Time
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | sum of square deviations: 190403570.0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | sum of deviations: -19600239338.999996
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | mean x: 1768619857.0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | mean y: 2784999.6
[2026-01-16 23:03:33] 2026-01-17 04:02:46,213 | INFO     | intersect: 182065403347.08136
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | chi2: 0.1311122291558273
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | current memory leak: -102.94 B/s (using 85 data points, chi2=0.13)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | could have reported an average CPU frequency of 3714 MHz (7 samples)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | ..............................
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | . Timing measurements:
[2026-01-16 23:03:33] 2026-01-17 04:02:46,214 | INFO     | . get job = 0 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,217 | INFO     | . initial setup = 3 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,217 | INFO     | . payload setup = 8 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,217 | INFO     | . stage-in = 0 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,219 | INFO     | . payload execution = 5568 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,219 | INFO     | . stage-out = 1 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,219 | INFO     | . log creation = 0 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,219 | INFO     | ..............................
[2026-01-16 23:03:33] 2026-01-17 04:02:46,274 | INFO     | 
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | job summary report
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | --------------------------------------------------
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | PanDA job id: 6963147366
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | task id: 47898826
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | errors: (none)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | pilot state: finished 
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | transexitcode: 0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | exeerrorcode: 0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | exeerrordiag: 
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | exitcode: 0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | exitmsg: OK
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | cpuconsumptiontime: 34752 s
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | nevents: 400
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | neventsw: 0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | pid: 3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | pgrp: 3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | corecount: 9
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | event service: False
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | sizes: {0: 2283970, 9: 2284232, 11: 2284260, 5581: 2310954, 5583: 2320008, 5592: 2320146}
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | --------------------------------------------------
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | 
[2026-01-16 23:03:33] 2026-01-17 04:02:46,275 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 23:03:33] 2026-01-17 04:02:46,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,330 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 23:03:33] 2026-01-17 04:02:46,331 | INFO     | job 6963147366 has completed (purged errors)
[2026-01-16 23:03:33] 2026-01-17 04:02:46,331 | INFO     | overall cleanup function is called
[2026-01-16 23:03:33] 2026-01-17 04:02:47,338 | INFO     | --- collectZombieJob: --- 10, [3669412]
[2026-01-16 23:03:33] 2026-01-17 04:02:47,338 | INFO     | zombie collector waiting for pid 3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:47,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 23:03:33] 2026-01-17 04:02:47,339 | INFO     | collected zombie processes
[2026-01-16 23:03:33] 2026-01-17 04:02:47,339 | INFO     | will attempt to kill all subprocesses of pid=3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:47,795 | INFO     | process IDs to be killed: [3669412] (in reverse order)
[2026-01-16 23:03:33] 2026-01-17 04:02:48,007 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 23:03:33] 2026-01-17 04:02:48,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 23:03:33] 2026-01-17 04:02:48,035 | INFO     | did not find any defunct processes belonging to 3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:48,056 | INFO     | did not find any defunct processes belonging to 3669412
[2026-01-16 23:03:33] 2026-01-17 04:02:48,057 | INFO     | ready for new job
[2026-01-16 23:03:33] 2026-01-17 04:02:48,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 23:03:33] 2026-01-17 04:02:48,059 | INFO     | ***************************************
[2026-01-16 23:03:33] 2026-01-17 04:02:48,059 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 23:03:33] 2026-01-17 04:02:48,059 | INFO     | ***************************************
[2026-01-16 23:03:33] 2026-01-17 04:02:48,059 | INFO     | 
[2026-01-16 23:03:33] 2026-01-17 04:02:48,069 | INFO     | architecture information:
[2026-01-16 23:03:33] 2026-01-17 04:02:48,076 | INFO     | executing command: cat /etc/os-release
[2026-01-16 23:03:33] 2026-01-17 04:02:48,130 | INFO     | cat /etc/os-release:
[2026-01-16 23:03:33] NAME="CentOS Linux"
[2026-01-16 23:03:33] VERSION="7 (Core)"
[2026-01-16 23:03:33] ID="centos"
[2026-01-16 23:03:33] ID_LIKE="rhel fedora"
[2026-01-16 23:03:33] VERSION_ID="7"
[2026-01-16 23:03:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 23:03:33] ANSI_COLOR="0;31"
[2026-01-16 23:03:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 23:03:33] HOME_URL="https://www.centos.org/"
[2026-01-16 23:03:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 23:03:33] 
[2026-01-16 23:03:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 23:03:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 23:03:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 23:03:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 23:03:33] 
[2026-01-16 23:03:33] 2026-01-17 04:02:48,131 | INFO     | ***************************************
[2026-01-16 23:03:33] 2026-01-17 04:02:48,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 23:03:33] 2026-01-17 04:02:48,690 | INFO     | sufficient remaining disk space (173666205696 B)
[2026-01-16 23:03:33] 2026-01-17 04:02:48,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 23:03:33] 2026-01-17 04:02:48,690 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | INFO     | update_server=False
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 23:03:33] 2026-01-17 04:02:48,691 | INFO     | aborting loop
[2026-01-16 23:03:33] 2026-01-17 04:02:48,735 | INFO     | all data control threads have been joined
[2026-01-16 23:03:33] 2026-01-17 04:02:49,480 | INFO     | all payload control threads have been joined
[2026-01-16 23:03:33] 2026-01-17 04:02:49,698 | INFO     | [job] retrieve thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:49,699 | INFO     | [job] job monitor thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:49,741 | INFO     | [data] control thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:49,807 | INFO     | [payload] validate_post thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,029 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,169 | INFO     | [data] copytool_in thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,220 | INFO     | [payload] failed_post thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,308 | INFO     | [job] validate thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,373 | INFO     | all job control threads have been joined
[2026-01-16 23:03:33] 2026-01-17 04:02:50,398 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,485 | INFO     | [payload] control thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,674 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:50,700 | INFO     | [data] copytool_out thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:51,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 23:03:33] 2026-01-17 04:02:51,379 | INFO     | [job] control thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:52,292 | INFO     | [job] queue monitor thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:02:52,701 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 23:03:33] 2026-01-17 04:03:19,064 | INFO     | PID=3662241 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 23:03:33] 2026-01-17 04:03:19,066 | INFO     | .. there are 24 such processes running
[2026-01-16 23:03:33] 2026-01-17 04:03:19,067 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 23:03:33] 2026-01-17 04:03:19,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 23:03:33] 2026-01-17 04:03:19,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 23:03:33] 2026-01-17 04:03:27,039 | INFO     | [monitor] cgroup control has ended
[2026-01-16 23:03:33] 2026-01-17 04:03:28,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359685195584)>', '<ExcThread(monitor, started 140359120185088)>']
[2026-01-16 23:03:33] 2026-01-17 04:03:28,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 23:03:33] 2026-01-17 04:03:28,115 | INFO     | [monitor] control thread has ended
[2026-01-16 23:03:33] 2026-01-17 04:03:33,132 | INFO     | all workflow threads have been joined
[2026-01-16 23:03:33] 2026-01-17 04:03:33,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 23:03:33] 2026-01-17 04:03:33,133 | INFO     | traces error code: 0
[2026-01-16 23:03:33] 2026-01-17 04:03:33,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 23:03:33] 2026-01-17 04:03:33,470 [wrapper] ==== pilot stdout END ====
[2026-01-16 23:03:33] 2026-01-17 04:03:33,473 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 23:03:33] 2026-01-17 04:03:33,476 [wrapper] pilotpid: 3662241
[2026-01-16 23:03:33] 2026-01-17 04:03:33,481 [wrapper] Pilot exit status: 0
[2026-01-16 23:03:33] 2026-01-17 04:03:33,559 [wrapper] pandaids: 6963147366
[2026-01-16 23:03:33] 2026-01-17 04:03:33,676 [wrapper] cleanup supervisor_pilot 4088612 3662242
[2026-01-16 23:03:33] 2026-01-17 04:03:33,680 [wrapper] Test setup, not cleaning
[2026-01-16 23:03:33] 2026-01-17 04:03:33,683 [wrapper] apfmon messages muted
[2026-01-16 23:03:33] 2026-01-17 04:03:33,686 [wrapper] ==== wrapper stdout END ====
[2026-01-16 23:03:33] 2026-01-17 04:03:33,690 [wrapper] ==== wrapper stderr END ====
[2026-01-16 23:03:33]  *** Error codes and diagnostics ***
[2026-01-16 23:03:33]     "exeErrorCode": 0,
[2026-01-16 23:03:33]     "exeErrorDiag": "",
[2026-01-16 23:03:33]     "pilotErrorCode": 0,
[2026-01-16 23:03:33]     "pilotErrorDiag": "",
[2026-01-16 23:03:33]  *** Listing of results directory ***
[2026-01-16 23:03:33] total 439156
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-16 23:03:33] -rwx------. 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas       100 Jan 16 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 23:03:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 16 21:28 run_atlas
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas       105 Jan 16 21:28 job.xml
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas 221080696 Jan 16 21:28 EVNT.47898824._001099.pool.root.1
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 21:28 start_atlas.sh
[2026-01-16 23:03:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 16 21:28 shared
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas    592398 Jan 16 21:28 input.tar.gz
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas         0 Jan 16 21:28 boinc_lockfile
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas      2519 Jan 16 21:28 pandaJob.out
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas        57 Jan 16 21:28 setup.sh.local
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas   1004099 Jan 16 21:29 agis_schedconf.cvmfs.json
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas   1516246 Jan 16 21:29 agis_ddmendpoints.agis.ALL.json
[2026-01-16 23:03:33] drwx------. 5 boincer umatlas      4096 Jan 16 21:29 pilot3
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas      7185 Jan 16 23:01 init_data.xml
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas 222365661 Jan 16 23:01 HITS.47898826._027561.pool.root.1
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas       530 Jan 16 23:01 boinc_task_state.xml
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas      1050 Jan 16 23:02 memory_monitor_summary.json
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas    373950 Jan 16 23:02 log.47898826._027561.job.log.tgz.1
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas      7808 Jan 16 23:02 heartbeat.json
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas        95 Jan 16 23:03 pilot_heartbeat.json
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas        27 Jan 16 23:03 wrapper_checkpoint.txt
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 16 23:03 boinc_mmap_file
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas      4825 Jan 16 23:03 pilotlog.txt
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas    785448 Jan 16 23:03 log.47898826._027561.job.log.1
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas       357 Jan 16 23:03 output.list
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas       620 Jan 16 23:03 runtime_log
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas   1177600 Jan 16 23:03 result.tar.gz
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas       658 Jan 16 23:03 ybeNDmMm6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEdfKDmr67jkn.diag
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas      9342 Jan 16 23:03 runtime_log.err
[2026-01-16 23:03:33] -rw-r--r--. 1 boincer umatlas     21922 Jan 16 23:03 stderr.txt
[2026-01-16 23:03:33] HITS file was successfully produced:
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas 222365661 Jan 16 23:01 shared/HITS.pool.root.1
[2026-01-16 23:03:33]  *** Contents of shared directory: ***
[2026-01-16 23:03:33] total 434808
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas 221080696 Jan 16 21:28 ATLAS.root_0
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 21:28 start_atlas.sh
[2026-01-16 23:03:33] -rw-r--r--. 2 boincer umatlas    592398 Jan 16 21:28 input.tar.gz
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas 222365661 Jan 16 23:01 HITS.pool.root.1
[2026-01-16 23:03:33] -rw-------. 1 boincer umatlas   1177600 Jan 16 23:03 result.tar.gz
23:03:35 (3658116): run_atlas exited; CPU time 34880.388215
23:03:35 (3658116): called boinc_finish(0)

</stderr_txt>
]]>

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