Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:27:32 (16056): wrapper (7.7.26015): starting
20:27:32 (16056): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 20:27:32] Arguments: --nthreads 12
[2026-01-16 20:27:32] Threads: 12
[2026-01-16 20:27:32] Checking for CVMFS
[2026-01-16 20:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 20:27:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 20:27:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 20:27:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 20:27:32] 2.11.2.0 2913 361901 96620 155226 0 1 11696125 20275201 1 130560 1 154037608 99.948 21936552 16037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-16 20:27:32] CVMFS is ok
[2026-01-16 20:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 20:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 20:27:32] Further information can be found at the LHC@home message board.
[2026-01-16 20:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 20:27:32] Checking for apptainer binary...
[2026-01-16 20:27:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 20:27:32] Running /usr/bin/apptainer --version
[2026-01-16 20:27:32] apptainer version 1.3.2-1.el7
[2026-01-16 20:27:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 20:27:34] c-205-6.aglt2.org
[2026-01-16 20:27:34] apptainer works
[2026-01-16 20:27:34] Set ATHENA_PROC_NUMBER=12
[2026-01-16 20:27:34] Set ATHENA_CORE_NUMBER=12
[2026-01-16 20:27:34] Starting ATLAS job with PandaID=6973222429
[2026-01-16 20:27:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 21:01:03]  *** The last 200 lines of the pilot log: ***
[2026-01-16 21:01:03]  guid=17fae9a9-40a3-44bf-8cd0-e445778d3964
[2026-01-16 21:01:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-16 21:01:03]  is_altstaged=None
[2026-01-16 21:01:03]  is_tar=False
[2026-01-16 21:01:03]  lfn=log.47962010._003653.job.log.tgz.1
[2026-01-16 21:01:03]  mtime=0
[2026-01-16 21:01:03]  protocol_id=None
[2026-01-16 21:01:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-16 21:01:03]  replicas=None
[2026-01-16 21:01:03]  scope=mc16_13TeV
[2026-01-16 21:01:03]  status=None
[2026-01-16 21:01:03]  status_code=0
[2026-01-16 21:01:03]  storage_token=
[2026-01-16 21:01:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6973222429/log.47962010._003653.job.log.tgz.1
[2026-01-16 21:01:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/bf/5c/log.47962010._003653.job.log.tgz.1
[2026-01-16 21:01:03]  workdir=None
[2026-01-16 21:01:03] ]
[2026-01-16 21:01:03] 2026-01-17 02:00:12,717 | INFO     | transferring file log.47962010._003653.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6973222429/log.47962010._003653.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-16 21:01:03] 2026-01-17 02:00:12,717 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6973222429/log.47962010._003653.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003653.job
[2026-01-16 21:01:03] 2026-01-17 02:00:12,739 | INFO     | adding to output.list: log.47962010._003653.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/bf/5c/log.47962010._003653.job.log.tgz.
[2026-01-16 21:01:03] 2026-01-17 02:00:12,740 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 21:01:03] 2026-01-17 02:00:12,740 | INFO     | summary of transferred files:
[2026-01-16 21:01:03] 2026-01-17 02:00:12,740 | INFO     |  -- lfn=log.47962010._003653.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 21:01:03] 2026-01-17 02:00:12,741 | INFO     | stage-out finished correctly
[2026-01-16 21:01:03] 2026-01-17 02:00:13,773 | INFO     | time since job start (1939s) is within the limit (349056.0s)
[2026-01-16 21:01:03] 2026-01-17 02:00:14,154 | INFO     | monitor loop #154: job 0:6973222429 is in state 'finished'
[2026-01-16 21:01:03] 2026-01-17 02:00:14,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:01:03] 2026-01-17 02:00:14,662 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 21:01:03] 2026-01-17 02:00:15,778 | INFO     | time since job start (1941s) is within the limit (349056.0s)
[2026-01-16 21:01:03] 2026-01-17 02:00:15,779 | INFO     | 1948s have passed since pilot start - server update state is 'RUNNING'
[2026-01-16 21:01:03] 2026-01-17 02:00:16,657 | INFO     | monitor loop #155: job 0:6973222429 is in state 'finished'
[2026-01-16 21:01:03] 2026-01-17 02:00:16,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,260 | INFO     | job 6973222429 has state=finished
[2026-01-16 21:01:03] 2026-01-17 02:00:17,260 | INFO     | preparing for final server update for job 6973222429 in state='finished'
[2026-01-16 21:01:03] 2026-01-17 02:00:17,260 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6973222429/jobReport.json
[2026-01-16 21:01:03] 2026-01-17 02:00:17,263 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-16 21:01:03] 2026-01-17 02:00:17,264 | INFO     | this job has now completed (state=finished)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,264 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,264 | INFO     | log transfer has been attempted: DONE
[2026-01-16 21:01:03] 2026-01-17 02:00:17,264 | INFO     | job 6973222429 has finished - writing final server update
[2026-01-16 21:01:03] 2026-01-17 02:00:17,265 | INFO     | total number of processed events: 50 (read)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,267 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6973222429/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,268 | INFO     | extracted standard info from prmon json
[2026-01-16 21:01:03] 2026-01-17 02:00:17,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 21:01:03] 2026-01-17 02:00:17,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 21:01:03] 2026-01-17 02:00:17,270 | INFO     | fitting pss+swap vs Time
[2026-01-16 21:01:03] 2026-01-17 02:00:17,270 | INFO     | sum of square deviations: 4837910.959999998
[2026-01-16 21:01:03] 2026-01-17 02:00:17,270 | INFO     | sum of deviations: -1538156192.3200002
[2026-01-16 21:01:03] 2026-01-17 02:00:17,270 | INFO     | mean x: 1768614336.04
[2026-01-16 21:01:03] 2026-01-17 02:00:17,270 | INFO     | mean y: 2963718.32
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | intersect: 562312835747.4349
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | chi2: 0.3739572918146203
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | current memory leak: -317.94 B/s (using 25 data points, chi2=0.37)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | could have reported an average CPU frequency of 1706 MHz (5 samples)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | ..............................
[2026-01-16 21:01:03] 2026-01-17 02:00:17,271 | INFO     | . Timing measurements:
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . get job = 0 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . initial setup = 7 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . payload setup = 7 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . stage-in = 0 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . payload execution = 1914 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . stage-out = 0 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | . log creation = 0 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,272 | INFO     | ..............................
[2026-01-16 21:01:03] 2026-01-17 02:00:17,349 | INFO     | 
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | job summary report
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | --------------------------------------------------
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | PanDA job id: 6973222429
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | task id: 47962010
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | errors: (none)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,350 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | pilot state: finished 
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | transexitcode: 0
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | exeerrorcode: 0
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | exeerrordiag: 
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | exitcode: 0
[2026-01-16 21:01:03] 2026-01-17 02:00:17,351 | INFO     | exitmsg: OK
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | cpuconsumptiontime: 17146 s
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | nevents: 50
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | neventsw: 0
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | pid: 24163
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | pgrp: 24163
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | corecount: 12
[2026-01-16 21:01:03] 2026-01-17 02:00:17,352 | INFO     | event service: False
[2026-01-16 21:01:03] 2026-01-17 02:00:17,353 | INFO     | sizes: {0: 2284830, 11: 2284830, 1925: 2310547, 1927: 2319541, 1929: 2319597, 1931: 2319875}
[2026-01-16 21:01:03] 2026-01-17 02:00:17,353 | INFO     | --------------------------------------------------
[2026-01-16 21:01:03] 2026-01-17 02:00:17,353 | INFO     | 
[2026-01-16 21:01:03] 2026-01-17 02:00:17,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 21:01:03] 2026-01-17 02:00:17,380 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,380 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,380 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,380 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | job 6973222429 has completed (purged errors)
[2026-01-16 21:01:03] 2026-01-17 02:00:17,383 | INFO     | overall cleanup function is called
[2026-01-16 21:01:03] 2026-01-17 02:00:18,399 | INFO     | --- collectZombieJob: --- 10, [24163]
[2026-01-16 21:01:03] 2026-01-17 02:00:18,399 | INFO     | zombie collector waiting for pid 24163
[2026-01-16 21:01:03] 2026-01-17 02:00:18,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 21:01:03] 2026-01-17 02:00:18,399 | INFO     | collected zombie processes
[2026-01-16 21:01:03] 2026-01-17 02:00:18,399 | INFO     | will attempt to kill all subprocesses of pid=24163
[2026-01-16 21:01:03] 2026-01-17 02:00:18,491 | INFO     | process IDs to be killed: [24163] (in reverse order)
[2026-01-16 21:01:03] 2026-01-17 02:00:18,542 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 21:01:03] 2026-01-17 02:00:18,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 21:01:03] 2026-01-17 02:00:18,546 | INFO     | did not find any defunct processes belonging to 24163
[2026-01-16 21:01:03] 2026-01-17 02:00:18,549 | INFO     | did not find any defunct processes belonging to 24163
[2026-01-16 21:01:03] 2026-01-17 02:00:18,550 | INFO     | ready for new job
[2026-01-16 21:01:03] 2026-01-17 02:00:18,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 21:01:03] 2026-01-17 02:00:18,551 | INFO     | **************************************
[2026-01-16 21:01:03] 2026-01-17 02:00:18,551 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-16 21:01:03] 2026-01-17 02:00:18,551 | INFO     | **************************************
[2026-01-16 21:01:03] 2026-01-17 02:00:18,551 | INFO     | 
[2026-01-16 21:01:03] 2026-01-17 02:00:18,552 | INFO     | architecture information:
[2026-01-16 21:01:03] 2026-01-17 02:00:18,552 | INFO     | executing command: cat /etc/os-release
[2026-01-16 21:01:03] 2026-01-17 02:00:18,567 | INFO     | cat /etc/os-release:
[2026-01-16 21:01:03] NAME="CentOS Linux"
[2026-01-16 21:01:03] VERSION="7 (Core)"
[2026-01-16 21:01:03] ID="centos"
[2026-01-16 21:01:03] ID_LIKE="rhel fedora"
[2026-01-16 21:01:03] VERSION_ID="7"
[2026-01-16 21:01:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 21:01:03] ANSI_COLOR="0;31"
[2026-01-16 21:01:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 21:01:03] HOME_URL="https://www.centos.org/"
[2026-01-16 21:01:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 21:01:03] 
[2026-01-16 21:01:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 21:01:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 21:01:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 21:01:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 21:01:03] 
[2026-01-16 21:01:03] 2026-01-17 02:00:18,567 | INFO     | **************************************
[2026-01-16 21:01:03] 2026-01-17 02:00:19,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 21:01:03] 2026-01-17 02:00:19,086 | INFO     | sufficient remaining disk space (29150412800 B)
[2026-01-16 21:01:03] 2026-01-17 02:00:19,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 21:01:03] 2026-01-17 02:00:19,087 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 21:01:03] 2026-01-17 02:00:19,087 | INFO     | update_server=False
[2026-01-16 21:01:03] 2026-01-17 02:00:19,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 21:01:03] 2026-01-17 02:00:19,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 21:01:03] 2026-01-17 02:00:19,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 21:01:03] 2026-01-17 02:00:19,161 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 21:01:03] 2026-01-17 02:00:19,161 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 21:01:03] 2026-01-17 02:00:19,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 21:01:03] 2026-01-17 02:00:19,161 | INFO     | will abort loop
[2026-01-16 21:01:03] 2026-01-17 02:00:19,536 | INFO     | all data control threads have been joined
[2026-01-16 21:01:03] 2026-01-17 02:00:19,696 | INFO     | all job control threads have been joined
[2026-01-16 21:01:03] 2026-01-17 02:00:20,091 | INFO     | [job] retrieve thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,093 | INFO     | [job] queue monitor thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,167 | INFO     | [job] job monitor thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,304 | INFO     | all payload control threads have been joined
[2026-01-16 21:01:03] 2026-01-17 02:00:20,529 | INFO     | [payload] failed_post thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,541 | INFO     | [data] control thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,676 | INFO     | [job] validate thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,701 | INFO     | [job] control thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 21:01:03] 2026-01-17 02:00:20,851 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:20,977 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,024 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,093 | INFO     | [data] copytool_out thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,218 | INFO     | [data] copytool_in thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,310 | INFO     | [payload] control thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:21,673 | INFO     | [payload] validate_post thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:24,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 21:01:03] 2026-01-17 02:00:48,981 | INFO     | PID=19738 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 21:01:03] 2026-01-17 02:00:48,981 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 21:01:03] 2026-01-17 02:00:48,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 21:01:03] 2026-01-17 02:00:48,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 21:01:03] 2026-01-17 02:00:56,890 | INFO     | [monitor] cgroup control has ended
[2026-01-16 21:01:03] 2026-01-17 02:00:58,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713585014592)>', '<ExcThread(monitor, started 139712324953856)>']
[2026-01-16 21:01:03] 2026-01-17 02:00:59,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 21:01:03] 2026-01-17 02:00:59,028 | INFO     | [monitor] control thread has ended
[2026-01-16 21:01:03] 2026-01-17 02:01:03,513 | INFO     | all workflow threads have been joined
[2026-01-16 21:01:03] 2026-01-17 02:01:03,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 21:01:03] 2026-01-17 02:01:03,513 | INFO     | traces error code: 0
[2026-01-16 21:01:03] 2026-01-17 02:01:03,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 21:01:03] 2026-01-17 02:01:03,608 [wrapper] ==== pilot stdout END ====
[2026-01-16 21:01:03] 2026-01-17 02:01:03,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 21:01:03] 2026-01-17 02:01:03,616 [wrapper] pilotpid: 19738
[2026-01-16 21:01:03] 2026-01-17 02:01:03,620 [wrapper] Pilot exit status: 0
[2026-01-16 21:01:03] 2026-01-17 02:01:03,634 [wrapper] pandaids: 6973222429
[2026-01-16 21:01:03] 2026-01-17 02:01:03,677 [wrapper] cleanup supervisor_pilot  3469 19739
[2026-01-16 21:01:03] 2026-01-17 02:01:03,681 [wrapper] Test setup, not cleaning
[2026-01-16 21:01:03] 2026-01-17 02:01:03,685 [wrapper] apfmon messages muted
[2026-01-16 21:01:03] 2026-01-17 02:01:03,689 [wrapper] ==== wrapper stdout END ====
[2026-01-16 21:01:03] 2026-01-17 02:01:03,693 [wrapper] ==== wrapper stderr END ====
[2026-01-16 21:01:03]  *** Error codes and diagnostics ***
[2026-01-16 21:01:03]     "exeErrorCode": 0,
[2026-01-16 21:01:03]     "exeErrorDiag": "",
[2026-01-16 21:01:03]     "pilotErrorCode": 0,
[2026-01-16 21:01:03]     "pilotErrorDiag": "",
[2026-01-16 21:01:03]  *** Listing of results directory ***
[2026-01-16 21:01:03] total 431564
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas    584422 Jan 16 20:11 pilot3.tar.gz
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas      5111 Jan 16 20:23 queuedata.json
[2026-01-16 21:01:03] -rwx------ 1 boincer umatlas     36322 Jan 16 20:26 runpilot2-wrapper.sh
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas       100 Jan 16 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 21:01:03] -rwxr-xr-x 1 boincer umatlas      7986 Jan 16 20:27 run_atlas
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas       105 Jan 16 20:27 job.xml
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas 391877451 Jan 16 20:27 EVNT.47962006._000019.pool.root.1
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas     15845 Jan 16 20:27 start_atlas.sh
[2026-01-16 21:01:03] drwxrwx--x 2 boincer umatlas      4096 Jan 16 20:27 shared
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas    597970 Jan 16 20:27 input.tar.gz
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas         0 Jan 16 20:27 boinc_lockfile
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas      2889 Jan 16 20:27 pandaJob.out
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas        57 Jan 16 20:27 setup.sh.local
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas   1004099 Jan 16 20:27 agis_schedconf.cvmfs.json
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas   1516246 Jan 16 20:27 agis_ddmendpoints.agis.ALL.json
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas       444 Jan 16 20:27 workernode_map.json
[2026-01-16 21:01:03] drwx------ 5 boincer umatlas      4096 Jan 16 20:27 pilot3
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas       529 Jan 16 20:54 boinc_task_state.xml
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas  42272114 Jan 16 20:59 HITS.47962010._003653.pool.root.1
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas      1049 Jan 16 21:00 memory_monitor_summary.json
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas        95 Jan 16 21:00 pilot_heartbeat.json
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas   1593118 Jan 16 21:00 log.47962010._003653.job.log.tgz.1
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas      6959 Jan 16 21:00 heartbeat.json
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas      5952 Jan 16 21:00 init_data.xml
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas      8192 Jan 16 21:00 boinc_mmap_file
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas        27 Jan 16 21:00 wrapper_checkpoint.txt
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas      4928 Jan 16 21:01 pilotlog.txt
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas    322185 Jan 16 21:01 log.47962010._003653.job.log.1
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas       353 Jan 16 21:01 output.list
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas       620 Jan 16 21:01 runtime_log
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas   1935360 Jan 16 21:01 result.tar.gz
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas      9338 Jan 16 21:01 runtime_log.err
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas       658 Jan 16 21:01 lbIKDmRGA18nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiFvKDmXfWBPm.diag
[2026-01-16 21:01:03] -rw-r--r-- 1 boincer umatlas     21425 Jan 16 21:01 stderr.txt
[2026-01-16 21:01:03] HITS file was successfully produced:
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas 42272114 Jan 16 20:59 shared/HITS.pool.root.1
[2026-01-16 21:01:03]  *** Contents of shared directory: ***
[2026-01-16 21:01:03] total 426472
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas 391877451 Jan 16 20:27 ATLAS.root_0
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas     15845 Jan 16 20:27 start_atlas.sh
[2026-01-16 21:01:03] -rw-r--r-- 2 boincer umatlas    597970 Jan 16 20:27 input.tar.gz
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas  42272114 Jan 16 20:59 HITS.pool.root.1
[2026-01-16 21:01:03] -rw------- 1 boincer umatlas   1935360 Jan 16 21:01 result.tar.gz
21:01:05 (16056): run_atlas exited; CPU time 16770.699693
21:01:05 (16056): called boinc_finish(0)

</stderr_txt>
]]>

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