Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:46:49 (30473): wrapper (7.7.26015): starting
12:46:49 (30473): wrapper: running run_atlas (--nthreads 8)
[2026-01-16 12:46:49] Arguments: --nthreads 8
[2026-01-16 12:46:49] Threads: 8
[2026-01-16 12:46:49] Checking for CVMFS
[2026-01-16 12:46:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 12:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 12:46:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 12:46:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 12:46:50] 2.11.2.0 2776 116837 91604 155215 3 1 11384848 20275201 1 130560 0 26006972 99.814 7213607 30419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-16 12:46:50] CVMFS is ok
[2026-01-16 12:46:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 12:46:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 12:46:50] Further information can be found at the LHC@home message board.
[2026-01-16 12:46:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 12:46:50] Checking for apptainer binary...
[2026-01-16 12:46:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 12:46:50] Running /usr/bin/apptainer --version
[2026-01-16 12:46:50] apptainer version 1.3.2-1.el7
[2026-01-16 12:46:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 12:46:52] c-115-7.aglt2.org
[2026-01-16 12:46:52] apptainer works
[2026-01-16 12:46:52] Set ATHENA_PROC_NUMBER=8
[2026-01-16 12:46:52] Set ATHENA_CORE_NUMBER=8
[2026-01-16 12:46:52] Starting ATLAS job with PandaID=6969345103
[2026-01-16 12:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 14:01:24]  *** The last 200 lines of the pilot log: ***
[2026-01-16 14:01:24]  status_code=0
[2026-01-16 14:01:24]  storage_token=
[2026-01-16 14:01:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969345103/log.48215263._014794.job.log.tgz.1
[2026-01-16 14:01:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/a6/log.48215263._014794.job.log.tgz.1
[2026-01-16 14:01:24]  workdir=None
[2026-01-16 14:01:24] ]
[2026-01-16 14:01:24] 2026-01-16 19:00:42,352 | INFO     | transferring file log.48215263._014794.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969345103/log.48215263._014794.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-16 14:01:24] 2026-01-16 19:00:42,352 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969345103/log.48215263._014794.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._014794.job
[2026-01-16 14:01:24] 2026-01-16 19:00:42,379 | INFO     | adding to output.list: log.48215263._014794.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/a6/log.48215263._014794.job.log.tg
[2026-01-16 14:01:24] 2026-01-16 19:00:42,380 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 14:01:24] 2026-01-16 19:00:42,380 | INFO     | summary of transferred files:
[2026-01-16 14:01:24] 2026-01-16 19:00:42,381 | INFO     |  -- lfn=log.48215263._014794.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 14:01:24] 2026-01-16 19:00:42,381 | INFO     | stage-out finished correctly
[2026-01-16 14:01:24] 2026-01-16 19:00:42,533 | WARNING  | process 8785 can no longer be monitored (due to stat problems) - aborting
[2026-01-16 14:01:24] 2026-01-16 19:00:42,534 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969345103/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 14:01:24] 2026-01-16 19:00:42,619 | INFO     | number of running child processes to parent process 8785: 1
[2026-01-16 14:01:24] 2026-01-16 19:00:42,620 | INFO     | maximum number of monitored processes: 6
[2026-01-16 14:01:24] 2026-01-16 19:00:43,043 | INFO     | time since job start (4412s) is within the limit (349056.0s)
[2026-01-16 14:01:24] 2026-01-16 19:00:43,989 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 14:01:24] 2026-01-16 19:00:45,055 | INFO     | time since job start (4414s) is within the limit (349056.0s)
[2026-01-16 14:01:24] 2026-01-16 19:00:45,123 | INFO     | monitor loop #328: job 0:6969345103 is in state 'finished'
[2026-01-16 14:01:24] 2026-01-16 19:00:45,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:01:24] 2026-01-16 19:00:45,311 | INFO     | job 6969345103 has state=finished
[2026-01-16 14:01:24] 2026-01-16 19:00:45,312 | INFO     | preparing for final server update for job 6969345103 in state='finished'
[2026-01-16 14:01:24] 2026-01-16 19:00:45,313 | INFO     | this job has now completed (state=finished)
[2026-01-16 14:01:24] 2026-01-16 19:00:45,313 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 14:01:24] 2026-01-16 19:00:45,313 | INFO     | log transfer has been attempted: DONE
[2026-01-16 14:01:24] 2026-01-16 19:00:45,313 | INFO     | job 6969345103 has finished - writing final server update
[2026-01-16 14:01:24] 2026-01-16 19:00:45,314 | INFO     | total number of processed events: 400 (read)
[2026-01-16 14:01:24] 2026-01-16 19:00:45,315 | INFO     | executing command: lscpu
[2026-01-16 14:01:24] 2026-01-16 19:00:45,345 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 14:01:24] 2026-01-16 19:00:46,170 | INFO     | PID=2301 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-16 14:01:24] 2026-01-16 19:00:47,171 | INFO     | time since job start (4416s) is within the limit (349056.0s)
[2026-01-16 14:01:24] 2026-01-16 19:00:47,627 | INFO     | monitor loop #329: job 0:6969345103 is in state 'finished'
[2026-01-16 14:01:24] 2026-01-16 19:00:47,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:01:24] 2026-01-16 19:00:49,177 | INFO     | time since job start (4418s) is within the limit (349056.0s)
[2026-01-16 14:01:24] 2026-01-16 19:00:50,131 | INFO     | monitor loop #330: job 0:6969345103 is in state 'finished'
[2026-01-16 14:01:24] 2026-01-16 19:00:50,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 14:01:24] 2026-01-16 19:00:51,183 | INFO     | time since job start (4420s) is within the limit (349056.0s)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,214 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-16 14:01:24] 2026-01-16 19:00:52,218 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-16 14:01:24] 2026-01-16 19:00:52,220 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969345103/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,221 | INFO     | extracted standard info from prmon json
[2026-01-16 14:01:24] 2026-01-16 19:00:52,221 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 14:01:24] 2026-01-16 19:00:52,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 14:01:24] 2026-01-16 19:00:52,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 14:01:24] 2026-01-16 19:00:52,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 14:01:24] 2026-01-16 19:00:52,223 | INFO     | fitting pss+swap vs Time
[2026-01-16 14:01:24] 2026-01-16 19:00:52,223 | INFO     | sum of square deviations: 85136480.0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,223 | INFO     | sum of deviations: -7796911968.999999
[2026-01-16 14:01:24] 2026-01-16 19:00:52,224 | INFO     | mean x: 1768587919.0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,224 | INFO     | mean y: 2665271.630769231
[2026-01-16 14:01:24] 2026-01-16 19:00:52,224 | INFO     | intersect: 161972297019.1484
[2026-01-16 14:01:24] 2026-01-16 19:00:52,224 | INFO     | chi2: 0.058306992383222844
[2026-01-16 14:01:24] 2026-01-16 19:00:52,224 | INFO     | current memory leak: -91.58 B/s (using 65 data points, chi2=0.06)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | could have reported an average CPU frequency of 2003 MHz (6 samples)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | ..............................
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . Timing measurements:
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . get job = 0 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . initial setup = 2 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . payload setup = 8 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . stage-in = 0 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,225 | INFO     | . payload execution = 4381 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,226 | INFO     | . stage-out = 0 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,226 | INFO     | . log creation = 0 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,226 | INFO     | ..............................
[2026-01-16 14:01:24] 2026-01-16 19:00:52,307 | INFO     | 
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | job summary report
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | --------------------------------------------------
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | PanDA job id: 6969345103
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | task id: 48215263
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | errors: (none)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,308 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | pilot state: finished 
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | transexitcode: 0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | exeerrorcode: 0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | exeerrordiag: 
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | exitcode: 0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | exitmsg: OK
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | cpuconsumptiontime: 31996 s
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | nevents: 400
[2026-01-16 14:01:24] 2026-01-16 19:00:52,309 | INFO     | neventsw: 0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | pid: 8785
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | pgrp: 8785
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | corecount: 8
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | event service: False
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | sizes: {0: 2283778, 1: 2283977, 7: 2284239, 12: 2284267, 4393: 2310312, 4394: 2310311, 4395: 2319493, 4396: 2319549, 4404: 2319743}
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | --------------------------------------------------
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | 
[2026-01-16 14:01:24] 2026-01-16 19:00:52,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 14:01:24] 2026-01-16 19:00:52,340 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,340 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,341 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,341 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,343 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 14:01:24] 2026-01-16 19:00:52,344 | INFO     | job 6969345103 has completed (purged errors)
[2026-01-16 14:01:24] 2026-01-16 19:00:52,344 | INFO     | overall cleanup function is called
[2026-01-16 14:01:24] 2026-01-16 19:00:53,349 | INFO     | --- collectZombieJob: --- 10, [8785]
[2026-01-16 14:01:24] 2026-01-16 19:00:53,349 | INFO     | zombie collector waiting for pid 8785
[2026-01-16 14:01:24] 2026-01-16 19:00:53,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 14:01:24] 2026-01-16 19:00:53,350 | INFO     | collected zombie processes
[2026-01-16 14:01:24] 2026-01-16 19:00:53,350 | INFO     | will attempt to kill all subprocesses of pid=8785
[2026-01-16 14:01:24] 2026-01-16 19:00:53,438 | INFO     | process IDs to be killed: [8785] (in reverse order)
[2026-01-16 14:01:24] 2026-01-16 19:00:53,497 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 14:01:24] 2026-01-16 19:00:53,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 14:01:24] 2026-01-16 19:00:53,501 | INFO     | did not find any defunct processes belonging to 8785
[2026-01-16 14:01:24] 2026-01-16 19:00:53,504 | INFO     | did not find any defunct processes belonging to 8785
[2026-01-16 14:01:24] 2026-01-16 19:00:53,504 | INFO     | ready for new job
[2026-01-16 14:01:24] 2026-01-16 19:00:53,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 14:01:24] 2026-01-16 19:00:53,505 | INFO     | ***************************************
[2026-01-16 14:01:24] 2026-01-16 19:00:53,506 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 14:01:24] 2026-01-16 19:00:53,506 | INFO     | ***************************************
[2026-01-16 14:01:24] 2026-01-16 19:00:53,506 | INFO     | 
[2026-01-16 14:01:24] 2026-01-16 19:00:53,506 | INFO     | architecture information:
[2026-01-16 14:01:24] 2026-01-16 19:00:53,507 | INFO     | executing command: cat /etc/os-release
[2026-01-16 14:01:24] 2026-01-16 19:00:53,527 | INFO     | cat /etc/os-release:
[2026-01-16 14:01:24] NAME="CentOS Linux"
[2026-01-16 14:01:24] VERSION="7 (Core)"
[2026-01-16 14:01:24] ID="centos"
[2026-01-16 14:01:24] ID_LIKE="rhel fedora"
[2026-01-16 14:01:24] VERSION_ID="7"
[2026-01-16 14:01:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 14:01:24] ANSI_COLOR="0;31"
[2026-01-16 14:01:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 14:01:24] HOME_URL="https://www.centos.org/"
[2026-01-16 14:01:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 14:01:24] 
[2026-01-16 14:01:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 14:01:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 14:01:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 14:01:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 14:01:24] 
[2026-01-16 14:01:24] 2026-01-16 19:00:53,527 | INFO     | ***************************************
[2026-01-16 14:01:24] 2026-01-16 19:00:54,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 14:01:24] 2026-01-16 19:00:54,053 | INFO     | sufficient remaining disk space (17857249280 B)
[2026-01-16 14:01:24] 2026-01-16 19:00:54,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 14:01:24] 2026-01-16 19:00:54,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 14:01:24] 2026-01-16 19:00:54,054 | INFO     | update_server=False
[2026-01-16 14:01:24] 2026-01-16 19:00:54,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 14:01:24] 2026-01-16 19:00:54,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 14:01:24] 2026-01-16 19:00:54,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 14:01:24] 2026-01-16 19:00:54,055 | INFO     | aborting loop
[2026-01-16 14:01:24] 2026-01-16 19:00:54,503 | INFO     | all data control threads have been joined
[2026-01-16 14:01:24] 2026-01-16 19:00:54,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 14:01:24] 2026-01-16 19:00:55,057 | INFO     | [job] job monitor thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,060 | INFO     | [job] retrieve thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,061 | INFO     | [job] queue monitor thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,239 | INFO     | [payload] validate_post thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,362 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,416 | INFO     | all payload control threads have been joined
[2026-01-16 14:01:24] 2026-01-16 19:00:55,440 | INFO     | [payload] failed_post thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 14:01:24] 2026-01-16 19:00:55,508 | INFO     | [data] control thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:55,579 | INFO     | all job control threads have been joined
[2026-01-16 14:01:24] 2026-01-16 19:00:55,857 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,010 | INFO     | [job] validate thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,401 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,418 | INFO     | [data] copytool_in thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,421 | INFO     | [payload] control thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:56,585 | INFO     | [job] control thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:57,488 | INFO     | [data] copytool_out thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:00:58,583 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 14:01:24] 2026-01-16 19:01:17,668 | INFO     | [monitor] cgroup control has ended
[2026-01-16 14:01:24] 2026-01-16 19:01:18,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928130758464)>', '<ExcThread(monitor, started 139927618582272)>']
[2026-01-16 14:01:24] 2026-01-16 19:01:23,040 | INFO     | all workflow threads have been joined
[2026-01-16 14:01:24] 2026-01-16 19:01:23,047 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 14:01:24] 2026-01-16 19:01:23,047 | INFO     | traces error code: 0
[2026-01-16 14:01:24] 2026-01-16 19:01:23,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 14:01:24] 2026-01-16 19:01:24,395 | INFO     | PID=2301 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-16 14:01:24] 2026-01-16 19:01:24,396 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 14:01:24] 2026-01-16 19:01:24,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 14:01:24] 2026-01-16 19:01:24,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 14:01:24] 2026-01-16 19:01:24,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 14:01:24] 2026-01-16 19:01:24,396 | INFO     | [monitor] control thread has ended
[2026-01-16 14:01:24] 2026-01-16 19:01:24,489 [wrapper] ==== pilot stdout END ====
[2026-01-16 14:01:24] 2026-01-16 19:01:24,494 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 14:01:24] 2026-01-16 19:01:24,499 [wrapper] pilotpid: 2301
[2026-01-16 14:01:24] 2026-01-16 19:01:24,503 [wrapper] Pilot exit status: 0
[2026-01-16 14:01:24] 2026-01-16 19:01:24,523 [wrapper] pandaids: 6969345103
[2026-01-16 14:01:24] 2026-01-16 19:01:24,569 [wrapper] cleanup supervisor_pilot  4210 2302
[2026-01-16 14:01:24] 2026-01-16 19:01:24,574 [wrapper] Test setup, not cleaning
[2026-01-16 14:01:24] 2026-01-16 19:01:24,579 [wrapper] apfmon messages muted
[2026-01-16 14:01:24] 2026-01-16 19:01:24,583 [wrapper] ==== wrapper stdout END ====
[2026-01-16 14:01:24] 2026-01-16 19:01:24,588 [wrapper] ==== wrapper stderr END ====
[2026-01-16 14:01:24]  *** Error codes and diagnostics ***
[2026-01-16 14:01:24]     "exeErrorCode": 0,
[2026-01-16 14:01:24]     "exeErrorDiag": "",
[2026-01-16 14:01:24]     "pilotErrorCode": 0,
[2026-01-16 14:01:24]     "pilotErrorDiag": "",
[2026-01-16 14:01:24]  *** Listing of results directory ***
[2026-01-16 14:01:24] total 737548
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 00:14 pilot3.tar.gz
[2026-01-16 14:01:24] -rwx------ 1 boincer umatlas     36322 Jan 14 00:14 runpilot2-wrapper.sh
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 00:17 queuedata.json
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas       100 Jan 16 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 14:01:24] -rwxr-xr-x 1 boincer umatlas      7986 Jan 16 12:46 run_atlas
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas       105 Jan 16 12:46 job.xml
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas 595908997 Jan 16 12:46 EVNT.32794306._000592.pool.root.1
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas     15847 Jan 16 12:46 start_atlas.sh
[2026-01-16 14:01:24] drwxrwx--x 2 boincer umatlas      4096 Jan 16 12:46 shared
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas    592401 Jan 16 12:46 input.tar.gz
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas         0 Jan 16 12:46 boinc_lockfile
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas      2507 Jan 16 12:46 pandaJob.out
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas        57 Jan 16 12:46 setup.sh.local
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas   1004091 Jan 16 12:47 agis_schedconf.cvmfs.json
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas   1516246 Jan 16 12:47 agis_ddmendpoints.agis.ALL.json
[2026-01-16 14:01:24] drwx------ 5 boincer umatlas      4096 Jan 16 12:47 pilot3
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas 153463560 Jan 16 14:00 HITS.48215263._014794.pool.root.1
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas       530 Jan 16 14:00 boinc_task_state.xml
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas      1045 Jan 16 14:00 memory_monitor_summary.json
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas    331095 Jan 16 14:00 log.48215263._014794.job.log.tgz.1
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas      7842 Jan 16 14:00 heartbeat.json
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas      5909 Jan 16 14:00 init_data.xml
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas      8192 Jan 16 14:01 boinc_mmap_file
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas        27 Jan 16 14:01 wrapper_checkpoint.txt
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas        95 Jan 16 14:01 pilot_heartbeat.json
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas       744 Jan 16 14:01 pilotlog.txt
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas    640620 Jan 16 14:01 log.48215263._014794.job.log.1
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas       357 Jan 16 14:01 output.list
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas       620 Jan 16 14:01 runtime_log
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas    993280 Jan 16 14:01 result.tar.gz
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas       657 Jan 16 14:01 UarLDmOO8z8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcFqKDmSuCbmn.diag
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas      9337 Jan 16 14:01 runtime_log.err
[2026-01-16 14:01:24] -rw-r--r-- 1 boincer umatlas     22282 Jan 16 14:01 stderr.txt
[2026-01-16 14:01:24] HITS file was successfully produced:
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas 153463560 Jan 16 14:00 shared/HITS.pool.root.1
[2026-01-16 14:01:24]  *** Contents of shared directory: ***
[2026-01-16 14:01:24] total 733388
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas 595908997 Jan 16 12:46 ATLAS.root_0
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas     15847 Jan 16 12:46 start_atlas.sh
[2026-01-16 14:01:24] -rw-r--r-- 2 boincer umatlas    592401 Jan 16 12:46 input.tar.gz
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas 153463560 Jan 16 14:00 HITS.pool.root.1
[2026-01-16 14:01:24] -rw------- 1 boincer umatlas    993280 Jan 16 14:01 result.tar.gz
14:01:26 (30473): run_atlas exited; CPU time 31972.356350
14:01:26 (30473): called boinc_finish(0)

</stderr_txt>
]]>

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