Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:18:22 (4008472): wrapper (7.7.26015): starting
00:18:22 (4008472): wrapper: running run_atlas (--nthreads 12)
[2026-01-17 00:18:22] Arguments: --nthreads 12
[2026-01-17 00:18:22] Threads: 12
[2026-01-17 00:18:22] Checking for CVMFS
[2026-01-17 00:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-17 00:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-17 00:18:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-17 00:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-17 00:18:23] 2.13.3.0 40677 11186 74812 155225 0 233 2150830 4096001 15872 130560 0 95119185 99.983 1193262 227 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-17 00:18:23] CVMFS is ok
[2026-01-17 00:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-17 00:18:23] Checking for apptainer binary...
[2026-01-17 00:18:23] apptainer is not installed, using version from CVMFS
[2026-01-17 00:18:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-17 00:18:25] epyc7v12
[2026-01-17 00:18:25] apptainer works
[2026-01-17 00:18:25] Set ATHENA_PROC_NUMBER=12
[2026-01-17 00:18:25] Set ATHENA_CORE_NUMBER=12
[2026-01-17 00:18:25] Starting ATLAS job with PandaID=6963167550
[2026-01-17 00:18:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-17 03:00:20]  *** The last 200 lines of the pilot log: ***
[2026-01-17 03:00:20] 2026-01-17 02:59:25,094 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-17 03:00:20] 2026-01-17 02:59:25,136 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2463.9292968750005
[2026-01-17 03:00:20] 2026-01-17 02:59:25,187 | INFO     | using path: /opt/boinc/instance_homes/boinc_31426/slots/1/PanDA_Pilot-6963167550/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,191 | INFO     | extracted standard info from prmon json
[2026-01-17 03:00:20] 2026-01-17 02:59:25,191 | INFO     | extracted standard memory fields from prmon json
[2026-01-17 03:00:20] 2026-01-17 02:59:25,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-17 03:00:20] 2026-01-17 02:59:25,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-17 03:00:20] 2026-01-17 02:59:25,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-17 03:00:20] 2026-01-17 02:59:25,199 | INFO     | fitting pss+swap vs Time
[2026-01-17 03:00:20] 2026-01-17 02:59:25,200 | INFO     | sum of square deviations: 1199917094.942676
[2026-01-17 03:00:20] 2026-01-17 02:59:25,203 | INFO     | sum of deviations: 30981434392.75795
[2026-01-17 03:00:20] 2026-01-17 02:59:25,203 | INFO     | mean x: 1768613969.0191083
[2026-01-17 03:00:20] 2026-01-17 02:59:25,203 | INFO     | mean y: 2603976.414012739
[2026-01-17 03:00:20] 2026-01-17 02:59:25,203 | INFO     | intersect: -45662382278.23923
[2026-01-17 03:00:20] 2026-01-17 02:59:25,203 | INFO     | chi2: 3.034177445481247
[2026-01-17 03:00:20] 2026-01-17 02:59:25,204 | INFO     | sum of square deviations: 1088883369.9407918
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | sum of deviations: 41094155773.48684
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | mean x: 1768613816.5197368
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | mean y: 2617463.1710526315
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | intersect: -66744376462.5008
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | chi2: 2.228724961539682
[2026-01-17 03:00:20] 2026-01-17 02:59:25,208 | INFO     | current chi2=2.228724961539682 (change=26.54599140670276 %)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,209 | INFO     | sum of square deviations: 984919544.9387786
[2026-01-17 03:00:20] 2026-01-17 02:59:25,210 | INFO     | sum of deviations: 39688237194.551025
[2026-01-17 03:00:20] 2026-01-17 02:59:25,210 | INFO     | mean x: 1768613664.0204082
[2026-01-17 03:00:20] 2026-01-17 02:59:25,212 | INFO     | mean y: 2615400.482993197
[2026-01-17 03:00:20] 2026-01-17 02:59:25,212 | INFO     | intersect: -71265295733.8514
[2026-01-17 03:00:20] 2026-01-17 02:59:25,213 | INFO     | chi2: 2.2293183141835025
[2026-01-17 03:00:20] 2026-01-17 02:59:25,213 | INFO     | current chi2=2.2293183141835025 (change=-0.02662296398433775 %)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,213 | INFO     | right removable region: 146
[2026-01-17 03:00:20] 2026-01-17 02:59:25,213 | INFO     | sum of square deviations: 1088881539.9407918
[2026-01-17 03:00:20] 2026-01-17 02:59:25,214 | INFO     | sum of deviations: -4109305547.6381607
[2026-01-17 03:00:20] 2026-01-17 02:59:25,214 | INFO     | mean x: 1768614121.5197368
[2026-01-17 03:00:20] 2026-01-17 02:59:25,215 | INFO     | mean y: 2651766.0460526315
[2026-01-17 03:00:20] 2026-01-17 02:59:25,215 | INFO     | intersect: 6677184811.750394
[2026-01-17 03:00:20] 2026-01-17 02:59:25,215 | INFO     | chi2: 1.0149912622351795
[2026-01-17 03:00:20] 2026-01-17 02:59:25,215 | INFO     | current chi2=1.0149912622351795 (change=66.54805856042499 %)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,215 | INFO     | sum of square deviations: 984924911.9727925
[2026-01-17 03:00:20] 2026-01-17 02:59:25,216 | INFO     | sum of deviations: -14102095897.2449
[2026-01-17 03:00:20] 2026-01-17 02:59:25,216 | INFO     | mean x: 1768614274.0136054
[2026-01-17 03:00:20] 2026-01-17 02:59:25,216 | INFO     | mean y: 2666386.1224489794
[2026-01-17 03:00:20] 2026-01-17 02:59:25,217 | INFO     | intersect: 25325579629.751526
[2026-01-17 03:00:20] 2026-01-17 02:59:25,217 | INFO     | chi2: 0.8686058190688439
[2026-01-17 03:00:20] 2026-01-17 02:59:25,217 | INFO     | current chi2=0.8686058190688439 (change=14.422335306017366 %)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,217 | INFO     | left removable region: 20
[2026-01-17 03:00:20] 2026-01-17 02:59:25,217 | INFO     | sum of square deviations: 620236685.4920647
[2026-01-17 03:00:20] 2026-01-17 02:59:25,218 | INFO     | sum of deviations: -4425096764.539682
[2026-01-17 03:00:20] 2026-01-17 02:59:25,218 | INFO     | mean x: 1768614243.5079365
[2026-01-17 03:00:20] 2026-01-17 02:59:25,218 | INFO     | mean y: 2685545.5396825396
[2026-01-17 03:00:20] 2026-01-17 02:59:25,218 | INFO     | intersect: 12620915569.22295
[2026-01-17 03:00:20] 2026-01-17 02:59:25,219 | INFO     | chi2: 0.00423094423211647
[2026-01-17 03:00:20] 2026-01-17 02:59:25,219 | INFO     | current memory leak: -7.13 B/s (using 126 data points, chi2=0.00)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,219 | INFO     | could have reported an average CPU frequency of 2436 MHz (9 samples)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,219 | INFO     | ..............................
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . Timing measurements:
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . get job = 0 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . initial setup = 2 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . payload setup = 19 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . stage-in = 0 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . payload execution = 9552 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . stage-out = 1 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | . log creation = 0 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,220 | INFO     | ..............................
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | 
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | job summary report
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | --------------------------------------------------
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | PanDA job id: 6963167550
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | task id: 47898826
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | errors: (none)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,326 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | pilot state: finished 
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | transexitcode: 0
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | exeerrorcode: 0
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | exeerrordiag: 
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | exitcode: 0
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | exitmsg: OK
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | cpuconsumptiontime: 64106 s
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | nevents: 400
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | neventsw: 0
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | pid: 4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:25,327 | INFO     | pgrp: 4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | corecount: 12
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | event service: False
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | sizes: {0: 2283823, 1: 2284022, 12: 2284022, 14: 2284312, 23: 2284340, 9576: 2313109, 9577: 2322153, 9578: 2322209, 9591: 2322467}
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | --------------------------------------------------
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | 
[2026-01-17 03:00:20] 2026-01-17 02:59:25,328 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-17 03:00:20] 2026-01-17 02:59:25,376 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-17 03:00:20] 2026-01-17 02:59:25,379 | INFO     | job 6963167550 has completed (purged errors)
[2026-01-17 03:00:20] 2026-01-17 02:59:25,379 | INFO     | overall cleanup function is called
[2026-01-17 03:00:20] 2026-01-17 02:59:26,388 | INFO     | --- collectZombieJob: --- 10, [4020032]
[2026-01-17 03:00:20] 2026-01-17 02:59:26,388 | INFO     | zombie collector waiting for pid 4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:26,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-17 03:00:20] 2026-01-17 02:59:26,388 | INFO     | collected zombie processes
[2026-01-17 03:00:20] 2026-01-17 02:59:26,389 | INFO     | will attempt to kill all subprocesses of pid=4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:27,013 | INFO     | process IDs to be killed: [4020032] (in reverse order)
[2026-01-17 03:00:20] 2026-01-17 02:59:27,289 | WARNING  | found no corresponding commands to process id(s)
[2026-01-17 03:00:20] 2026-01-17 02:59:27,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-17 03:00:20] 2026-01-17 02:59:27,311 | INFO     | did not find any defunct processes belonging to 4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:27,328 | INFO     | did not find any defunct processes belonging to 4020032
[2026-01-17 03:00:20] 2026-01-17 02:59:27,328 | INFO     | ready for new job
[2026-01-17 03:00:20] 2026-01-17 02:59:27,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-17 03:00:20] 2026-01-17 02:59:27,331 | INFO     | ***************************************
[2026-01-17 03:00:20] 2026-01-17 02:59:27,331 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-17 03:00:20] 2026-01-17 02:59:27,334 | INFO     | ***************************************
[2026-01-17 03:00:20] 2026-01-17 02:59:27,334 | INFO     | 
[2026-01-17 03:00:20] 2026-01-17 02:59:27,350 | INFO     | architecture information:
[2026-01-17 03:00:20] 2026-01-17 02:59:27,361 | INFO     | executing command: cat /etc/os-release
[2026-01-17 03:00:20] 2026-01-17 02:59:27,400 | INFO     | cat /etc/os-release:
[2026-01-17 03:00:20] NAME="CentOS Linux"
[2026-01-17 03:00:20] VERSION="7 (Core)"
[2026-01-17 03:00:20] ID="centos"
[2026-01-17 03:00:20] ID_LIKE="rhel fedora"
[2026-01-17 03:00:20] VERSION_ID="7"
[2026-01-17 03:00:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-17 03:00:20] ANSI_COLOR="0;31"
[2026-01-17 03:00:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-17 03:00:20] HOME_URL="https://www.centos.org/"
[2026-01-17 03:00:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-17 03:00:20] 
[2026-01-17 03:00:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-17 03:00:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-17 03:00:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-17 03:00:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-17 03:00:20] 
[2026-01-17 03:00:20] 2026-01-17 02:59:27,401 | INFO     | ***************************************
[2026-01-17 03:00:20] 2026-01-17 02:59:27,906 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-17 03:00:20] 2026-01-17 02:59:27,948 | INFO     | sufficient remaining disk space (373306687488 B)
[2026-01-17 03:00:20] 2026-01-17 02:59:27,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-17 03:00:20] 2026-01-17 02:59:27,948 | INFO     | current server update state: UPDATING_FINAL
[2026-01-17 03:00:20] 2026-01-17 02:59:27,949 | INFO     | update_server=False
[2026-01-17 03:00:20] 2026-01-17 02:59:27,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-17 03:00:20] 2026-01-17 02:59:27,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-17 03:00:20] 2026-01-17 02:59:27,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-17 03:00:20] 2026-01-17 02:59:28,472 | INFO     | all payload control threads have been joined
[2026-01-17 03:00:20] 2026-01-17 02:59:28,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-17 03:00:20] 2026-01-17 02:59:28,501 | INFO     | aborting loop
[2026-01-17 03:00:20] 2026-01-17 02:59:28,959 | INFO     | [job] retrieve thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,032 | INFO     | all data control threads have been joined
[2026-01-17 03:00:20] 2026-01-17 02:59:29,187 | INFO     | [payload] failed_post thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,249 | INFO     | all job control threads have been joined
[2026-01-17 03:00:20] 2026-01-17 02:59:29,261 | INFO     | [payload] validate_post thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,356 | INFO     | [data] copytool_in thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,443 | INFO     | [payload] execute_payloads thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,477 | INFO     | [payload] control thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,506 | INFO     | [job] job monitor thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,833 | INFO     | [payload] validate_pre thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,845 | INFO     | [job] create_data_payload thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:29,955 | INFO     | [data] copytool_out thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:30,009 | INFO     | [job] validate thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:30,038 | INFO     | [data] control thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:30,254 | INFO     | [job] control thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:30,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-17 03:00:20] 2026-01-17 02:59:31,347 | INFO     | [job] queue monitor thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:31,965 | INFO     | [data] queue_monitor thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:38,007 | INFO     | job.realtimelogging is not enabled
[2026-01-17 03:00:20] 2026-01-17 02:59:39,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-17 03:00:20] 2026-01-17 02:59:58,090 | INFO     | PID=4012744 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-17 03:00:20] 2026-01-17 02:59:58,091 | INFO     | .. there are 11 such processes running
[2026-01-17 03:00:20] 2026-01-17 02:59:58,092 | INFO     | found 0 job(s) in 20 queues
[2026-01-17 03:00:20] 2026-01-17 02:59:58,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-17 03:00:20] 2026-01-17 02:59:58,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-17 03:00:20] 2026-01-17 03:00:13,546 | INFO     | [monitor] cgroup control has ended
[2026-01-17 03:00:20] 2026-01-17 03:00:14,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134080970209088)>', '<ExcThread(monitor, started 134080280651520)>']
[2026-01-17 03:00:20] 2026-01-17 03:00:15,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-17 03:00:20] 2026-01-17 03:00:15,179 | INFO     | [monitor] control thread has ended
[2026-01-17 03:00:20] 2026-01-17 03:00:19,338 | INFO     | all workflow threads have been joined
[2026-01-17 03:00:20] 2026-01-17 03:00:19,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-17 03:00:20] 2026-01-17 03:00:19,339 | INFO     | traces error code: 0
[2026-01-17 03:00:20] 2026-01-17 03:00:19,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-17 03:00:20] 2026-01-17 03:00:19,679 [wrapper] ==== pilot stdout END ====
[2026-01-17 03:00:20] 2026-01-17 03:00:19,686 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-17 03:00:20] 2026-01-17 03:00:19,690 [wrapper] pilotpid: 4012744
[2026-01-17 03:00:20] 2026-01-17 03:00:19,699 [wrapper] Pilot exit status: 0
[2026-01-17 03:00:20] 2026-01-17 03:00:19,732 [wrapper] pandaids: 6963167550
[2026-01-17 03:00:20] 2026-01-17 03:00:19,924 [wrapper] cleanup supervisor_pilot  146627 4012745
[2026-01-17 03:00:20] ./runpilot2-wrapper.sh: line 616: 146627 Terminated              sleep 900
[2026-01-17 03:00:20] 2026-01-17 03:00:19,936 [wrapper] Test setup, not cleaning
[2026-01-17 03:00:20] 2026-01-17 03:00:19,946 [wrapper] apfmon messages muted
[2026-01-17 03:00:20] 2026-01-17 03:00:19,954 [wrapper] ==== wrapper stdout END ====
[2026-01-17 03:00:20] 2026-01-17 03:00:19,962 [wrapper] ==== wrapper stderr END ====
[2026-01-17 03:00:20]  *** Error codes and diagnostics ***
[2026-01-17 03:00:20]     "exeErrorCode": 0,
[2026-01-17 03:00:20]     "exeErrorDiag": "",
[2026-01-17 03:00:20]     "pilotErrorCode": 0,
[2026-01-17 03:00:20]     "pilotErrorDiag": "",
[2026-01-17 03:00:20]  *** Listing of results directory ***
[2026-01-17 03:00:20] total 446508
[2026-01-17 03:00:20] -rw-r--r-- 1 boinc boinc    579449 Jan  9 00:57 pilot3.tar.gz
[2026-01-17 03:00:20] -rwx------ 1 boinc boinc     36322 Jan  9 00:57 runpilot2-wrapper.sh
[2026-01-17 03:00:20] -rw-r--r-- 1 boinc boinc      5112 Jan  9 00:57 queuedata.json
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc       100 Jan 17 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-17 03:00:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 17 00:18 run_atlas
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc       105 Jan 17 00:18 job.xml
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc 227308685 Jan 17 00:18 EVNT.47898824._001328.pool.root.1
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc     15847 Jan 17 00:18 start_atlas.sh
[2026-01-17 03:00:20] drwxrwx--x 2 boinc boinc      4096 Jan 17 00:18 shared
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc    592399 Jan 17 00:18 input.tar.gz
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc      6556 Jan 17 00:18 init_data.xml
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc         0 Jan 17 00:18 boinc_setup_complete
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc         0 Jan 17 00:18 boinc_lockfile
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc      2520 Jan 17 00:18 pandaJob.out
[2026-01-17 03:00:20] -rw------- 1 boinc boinc   1004099 Jan 17 00:18 agis_schedconf.cvmfs.json
[2026-01-17 03:00:20] -rw------- 1 boinc boinc   1516246 Jan 17 00:18 agis_ddmendpoints.agis.ALL.json
[2026-01-17 03:00:20] drwx------ 5 boinc boinc      4096 Jan 17 00:18 pilot3
[2026-01-17 03:00:20] -rw------- 1 boinc boinc 222396247 Jan 17 02:58 HITS.47898826._035791.pool.root.1
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc       529 Jan 17 02:58 boinc_task_state.xml
[2026-01-17 03:00:20] -rw------- 1 boinc boinc      1022 Jan 17 02:59 memory_monitor_summary.json
[2026-01-17 03:00:20] -rw------- 1 boinc boinc    462912 Jan 17 02:59 log.47898826._035791.job.log.tgz.1
[2026-01-17 03:00:20] -rw------- 1 boinc boinc      7730 Jan 17 02:59 heartbeat.json
[2026-01-17 03:00:20] -rw------- 1 boinc boinc        95 Jan 17 02:59 pilot_heartbeat.json
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc        27 Jan 17 03:00 wrapper_checkpoint.txt
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc      8192 Jan 17 03:00 boinc_mmap_file
[2026-01-17 03:00:20] -rw------- 1 boinc boinc      4920 Jan 17 03:00 pilotlog.txt
[2026-01-17 03:00:20] -rw------- 1 boinc boinc   1330976 Jan 17 03:00 log.47898826._035791.job.log.1
[2026-01-17 03:00:20] -rw------- 1 boinc boinc       357 Jan 17 03:00 output.list
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc       620 Jan 17 03:00 runtime_log
[2026-01-17 03:00:20] -rw------- 1 boinc boinc   1812480 Jan 17 03:00 result.tar.gz
[2026-01-17 03:00:20] -rw------- 1 boinc boinc       652 Jan 17 03:00 vUHLDmpzFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNbgKDmIunjim.diag
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc      9167 Jan 17 03:00 runtime_log.err
[2026-01-17 03:00:20] -rw-rw-r-- 1 boinc boinc     20937 Jan 17 03:00 stderr.txt
[2026-01-17 03:00:20] HITS file was successfully produced:
[2026-01-17 03:00:20] -rw------- 1 boinc boinc 222396247 Jan 17 02:58 shared/HITS.pool.root.1
[2026-01-17 03:00:20]  *** Contents of shared directory: ***
[2026-01-17 03:00:20] total 441544
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc 227308685 Jan 17 00:18 ATLAS.root_0
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc     15847 Jan 17 00:18 start_atlas.sh
[2026-01-17 03:00:20] -rw-r--r-- 2 boinc boinc    592399 Jan 17 00:18 input.tar.gz
[2026-01-17 03:00:20] -rw------- 1 boinc boinc 222396247 Jan 17 02:58 HITS.pool.root.1
[2026-01-17 03:00:20] -rw------- 1 boinc boinc   1812480 Jan 17 03:00 result.tar.gz
03:00:21 (4008472): run_atlas exited; CPU time 64593.576783
03:00:21 (4008472): called boinc_finish(0)

</stderr_txt>
]]>

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