Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:13:31 (3984284): wrapper (7.7.26015): starting
09:13:31 (3984284): wrapper: running run_atlas (--nthreads 9)
[2026-01-16 09:13:31] Arguments: --nthreads 9
[2026-01-16 09:13:31] Threads: 9
[2026-01-16 09:13:31] Checking for CVMFS
[2026-01-16 09:13:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 09:13:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 09:13:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 09:13:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 09:13:32] 2.13.3.0 1933508 100797 246672 155209 0 806 27610078 32503809 18210 16776704 0 594977852 99.513 761960873 37276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-16 09:13:32] CVMFS is ok
[2026-01-16 09:13:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 09:13:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 09:13:32] Further information can be found at the LHC@home message board.
[2026-01-16 09:13:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 09:13:32] Checking for apptainer binary...
[2026-01-16 09:13:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 09:13:32] Running /usr/bin/apptainer --version
[2026-01-16 09:13:32] apptainer version 1.4.5-2.el9
[2026-01-16 09:13:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 09:13:32] c7-3-16.aglt2.org
[2026-01-16 09:13:32] apptainer works
[2026-01-16 09:13:32] Set ATHENA_PROC_NUMBER=9
[2026-01-16 09:13:32] Set ATHENA_CORE_NUMBER=9
[2026-01-16 09:13:32] Starting ATLAS job with PandaID=6970538405
[2026-01-16 09:13:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 10:17:28]  *** The last 200 lines of the pilot log: ***
[2026-01-16 10:17:28]  lfn=log.48215263._050491.job.log.tgz.1
[2026-01-16 10:17:28]  mtime=0
[2026-01-16 10:17:28]  protocol_id=None
[2026-01-16 10:17:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-16 10:17:28]  replicas=None
[2026-01-16 10:17:28]  scope=mc23_13p6TeV
[2026-01-16 10:17:28]  status=None
[2026-01-16 10:17:28]  status_code=0
[2026-01-16 10:17:28]  storage_token=
[2026-01-16 10:17:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6970538405/log.48215263._050491.job.log.tgz.1
[2026-01-16 10:17:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/b9/log.48215263._050491.job.log.tgz.1
[2026-01-16 10:17:28]  workdir=None
[2026-01-16 10:17:28] ]
[2026-01-16 10:17:28] 2026-01-16 15:16:50,672 | INFO     | transferring file log.48215263._050491.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970538405/log.48215263._050491.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-16 10:17:28] 2026-01-16 15:16:50,673 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970538405/log.48215263._050491.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._050491.job
[2026-01-16 10:17:28] 2026-01-16 15:16:50,698 | INFO     | adding to output.list: log.48215263._050491.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/b9/log.48215263._050491.job.log.tg
[2026-01-16 10:17:28] 2026-01-16 15:16:50,699 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 10:17:28] 2026-01-16 15:16:50,699 | INFO     | summary of transferred files:
[2026-01-16 10:17:28] 2026-01-16 15:16:50,699 | INFO     |  -- lfn=log.48215263._050491.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 10:17:28] 2026-01-16 15:16:50,699 | INFO     | stage-out finished correctly
[2026-01-16 10:17:28] 2026-01-16 15:16:50,739 | INFO     | time since job start (3777s) is within the limit (349056.0s)
[2026-01-16 10:17:28] 2026-01-16 15:16:50,781 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | job 6970538405 has state=finished
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | preparing for final server update for job 6970538405 in state='finished'
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | this job has now completed (state=finished)
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | log transfer has been attempted: DONE
[2026-01-16 10:17:28] 2026-01-16 15:16:51,334 | INFO     | job 6970538405 has finished - writing final server update
[2026-01-16 10:17:28] 2026-01-16 15:16:51,335 | INFO     | total number of processed events: 400 (read)
[2026-01-16 10:17:28] 2026-01-16 15:16:51,335 | INFO     | executing command: lscpu
[2026-01-16 10:17:28] 2026-01-16 15:16:51,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 10:17:28] 2026-01-16 15:16:52,313 | INFO     | monitor loop #271: job 0:6970538405 is in state 'finished'
[2026-01-16 10:17:28] 2026-01-16 15:16:52,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 10:17:28] 2026-01-16 15:16:52,750 | INFO     | time since job start (3779s) is within the limit (349056.0s)
[2026-01-16 10:17:28] 2026-01-16 15:16:54,755 | INFO     | time since job start (3781s) is within the limit (349056.0s)
[2026-01-16 10:17:28] 2026-01-16 15:16:54,815 | INFO     | monitor loop #272: job 0:6970538405 is in state 'finished'
[2026-01-16 10:17:28] 2026-01-16 15:16:54,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,354 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 10:17:28] 2026-01-16 15:16:56,359 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3147.4372708333344
[2026-01-16 10:17:28] 2026-01-16 15:16:56,374 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970538405/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,375 | INFO     | extracted standard info from prmon json
[2026-01-16 10:17:28] 2026-01-16 15:16:56,375 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 10:17:28] 2026-01-16 15:16:56,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 10:17:28] 2026-01-16 15:16:56,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 10:17:28] 2026-01-16 15:16:56,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 10:17:28] 2026-01-16 15:16:56,377 | INFO     | fitting pss+swap vs Time
[2026-01-16 10:17:28] 2026-01-16 15:16:56,377 | INFO     | sum of square deviations: 51573060.0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,377 | INFO     | sum of deviations: -4137263695.0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | mean x: 1768574826.0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | mean y: 2961685.090909091
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | intersect: 141880531476.3878
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | chi2: 0.10799838129237797
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | current memory leak: -80.22 B/s (using 55 data points, chi2=0.11)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | could have reported an average CPU frequency of 3164 MHz (6 samples)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | ..............................
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | . Timing measurements:
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | . get job = 0 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,378 | INFO     | . initial setup = 4 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | . payload setup = 12 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | . stage-in = 0 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | . payload execution = 3740 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | . stage-out = 0 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | . log creation = 0 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,379 | INFO     | ..............................
[2026-01-16 10:17:28] 2026-01-16 15:16:56,669 | INFO     | 
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | job summary report
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | --------------------------------------------------
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | PanDA job id: 6970538405
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | task id: 48215263
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | errors: (none)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | pilot state: finished 
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | transexitcode: 0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | exeerrorcode: 0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | exeerrordiag: 
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | exitcode: 0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | exitmsg: OK
[2026-01-16 10:17:28] 2026-01-16 15:16:56,670 | INFO     | cpuconsumptiontime: 20949 s
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | nevents: 400
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | neventsw: 0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | pid: 3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | pgrp: 3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | corecount: 9
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | event service: False
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | sizes: {0: 2283725, 1: 2283980, 10: 2284242, 12: 2284270, 3756: 2310003, 3757: 2310002, 3758: 2319240, 3763: 2319378}
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | --------------------------------------------------
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | 
[2026-01-16 10:17:28] 2026-01-16 15:16:56,671 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 10:17:28] 2026-01-16 15:16:56,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,690 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | job 6970538405 has completed (purged errors)
[2026-01-16 10:17:28] 2026-01-16 15:16:56,692 | INFO     | overall cleanup function is called
[2026-01-16 10:17:28] 2026-01-16 15:16:57,703 | INFO     | --- collectZombieJob: --- 10, [3995103]
[2026-01-16 10:17:28] 2026-01-16 15:16:57,703 | INFO     | zombie collector waiting for pid 3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:57,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 10:17:28] 2026-01-16 15:16:57,704 | INFO     | collected zombie processes
[2026-01-16 10:17:28] 2026-01-16 15:16:57,704 | INFO     | will attempt to kill all subprocesses of pid=3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:58,195 | INFO     | process IDs to be killed: [3995103] (in reverse order)
[2026-01-16 10:17:28] 2026-01-16 15:16:58,344 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 10:17:28] 2026-01-16 15:16:58,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 10:17:28] 2026-01-16 15:16:58,365 | INFO     | did not find any defunct processes belonging to 3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:58,385 | INFO     | did not find any defunct processes belonging to 3995103
[2026-01-16 10:17:28] 2026-01-16 15:16:58,386 | INFO     | ready for new job
[2026-01-16 10:17:28] 2026-01-16 15:16:58,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 10:17:28] 2026-01-16 15:16:58,387 | INFO     | ***************************************
[2026-01-16 10:17:28] 2026-01-16 15:16:58,387 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 10:17:28] 2026-01-16 15:16:58,387 | INFO     | ***************************************
[2026-01-16 10:17:28] 2026-01-16 15:16:58,387 | INFO     | 
[2026-01-16 10:17:28] 2026-01-16 15:16:58,393 | INFO     | architecture information:
[2026-01-16 10:17:28] 2026-01-16 15:16:58,393 | INFO     | executing command: cat /etc/os-release
[2026-01-16 10:17:28] 2026-01-16 15:16:58,411 | INFO     | cat /etc/os-release:
[2026-01-16 10:17:28] NAME="CentOS Linux"
[2026-01-16 10:17:28] VERSION="7 (Core)"
[2026-01-16 10:17:28] ID="centos"
[2026-01-16 10:17:28] ID_LIKE="rhel fedora"
[2026-01-16 10:17:28] VERSION_ID="7"
[2026-01-16 10:17:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 10:17:28] ANSI_COLOR="0;31"
[2026-01-16 10:17:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 10:17:28] HOME_URL="https://www.centos.org/"
[2026-01-16 10:17:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 10:17:28] 
[2026-01-16 10:17:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 10:17:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 10:17:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 10:17:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 10:17:28] 
[2026-01-16 10:17:28] 2026-01-16 15:16:58,412 | INFO     | ***************************************
[2026-01-16 10:17:28] 2026-01-16 15:16:58,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 10:17:28] 2026-01-16 15:16:58,933 | INFO     | sufficient remaining disk space (95928975360 B)
[2026-01-16 10:17:28] 2026-01-16 15:16:58,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 10:17:28] 2026-01-16 15:16:58,933 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 10:17:28] 2026-01-16 15:16:58,934 | INFO     | update_server=False
[2026-01-16 10:17:28] 2026-01-16 15:16:58,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 10:17:28] 2026-01-16 15:16:58,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 10:17:28] 2026-01-16 15:16:58,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 10:17:28] 2026-01-16 15:16:58,935 | INFO     | aborting loop
[2026-01-16 10:17:28] 2026-01-16 15:16:59,145 | INFO     | [monitor] cgroup control has ended
[2026-01-16 10:17:28] 2026-01-16 15:16:59,153 | INFO     | all payload control threads have been joined
[2026-01-16 10:17:28] 2026-01-16 15:16:59,349 | INFO     | all data control threads have been joined
[2026-01-16 10:17:28] 2026-01-16 15:16:59,938 | INFO     | [job] retrieve thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:16:59,940 | INFO     | [job] job monitor thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,158 | INFO     | [payload] control thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,249 | INFO     | [payload] validate_post thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,250 | INFO     | all job control threads have been joined
[2026-01-16 10:17:28] 2026-01-16 15:17:00,329 | INFO     | [data] copytool_in thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,354 | INFO     | [data] control thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,402 | INFO     | [job] validate thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,649 | INFO     | [payload] failed_post thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,754 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:00,939 | INFO     | [data] copytool_out thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:01,061 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:01,072 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:01,255 | INFO     | [job] control thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:01,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 10:17:28] 2026-01-16 15:17:01,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 10:17:28] 2026-01-16 15:17:02,473 | INFO     | [job] queue monitor thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:05,377 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:09,176 | INFO     | job.realtimelogging is not enabled
[2026-01-16 10:17:28] 2026-01-16 15:17:10,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 10:17:28] 2026-01-16 15:17:10,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744284919616)>', '<ExcThread(monitor, started 139743799011072)>']
[2026-01-16 10:17:28] 2026-01-16 15:17:15,827 | INFO     | all workflow threads have been joined
[2026-01-16 10:17:28] 2026-01-16 15:17:15,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 10:17:28] 2026-01-16 15:17:15,831 | INFO     | traces error code: 0
[2026-01-16 10:17:28] 2026-01-16 15:17:15,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 10:17:28] 2026-01-16 15:17:28,337 | INFO     | PID=3987986 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | INFO     | .. there are 20 such processes running
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 10:17:28] 2026-01-16 15:17:28,338 | INFO     | [monitor] control thread has ended
[2026-01-16 10:17:28] 2026-01-16 15:17:28,450 [wrapper] ==== pilot stdout END ====
[2026-01-16 10:17:28] 2026-01-16 15:17:28,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 10:17:28] 2026-01-16 15:17:28,458 [wrapper] pilotpid: 3987986
[2026-01-16 10:17:28] 2026-01-16 15:17:28,462 [wrapper] Pilot exit status: 0
[2026-01-16 10:17:28] 2026-01-16 15:17:28,473 [wrapper] pandaids: 6970538405
[2026-01-16 10:17:28] 2026-01-16 15:17:28,576 [wrapper] cleanup supervisor_pilot  154898 3987987
[2026-01-16 10:17:28] 2026-01-16 15:17:28,583 [wrapper] Test setup, not cleaning
[2026-01-16 10:17:28] 2026-01-16 15:17:28,586 [wrapper] apfmon messages muted
[2026-01-16 10:17:28] 2026-01-16 15:17:28,589 [wrapper] ==== wrapper stdout END ====
[2026-01-16 10:17:28] 2026-01-16 15:17:28,592 [wrapper] ==== wrapper stderr END ====
[2026-01-16 10:17:28]  *** Error codes and diagnostics ***
[2026-01-16 10:17:28]     "exeErrorCode": 0,
[2026-01-16 10:17:28]     "exeErrorDiag": "",
[2026-01-16 10:17:28]     "pilotErrorCode": 0,
[2026-01-16 10:17:28]     "pilotErrorDiag": "",
[2026-01-16 10:17:28]  *** Listing of results directory ***
[2026-01-16 10:17:28] total 733680
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:35 queuedata.json
[2026-01-16 10:17:28] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas       100 Jan 16 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 10:17:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 16 09:13 run_atlas
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas       105 Jan 16 09:13 job.xml
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas 595229666 Jan 16 09:13 EVNT.32794306._001960.pool.root.1
[2026-01-16 10:17:28] drwxrwx--x. 2 boincer umatlas      4096 Jan 16 09:13 shared
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas    592409 Jan 16 09:13 input.tar.gz
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 09:13 start_atlas.sh
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas         0 Jan 16 09:13 boinc_lockfile
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas      2509 Jan 16 09:13 pandaJob.out
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas        57 Jan 16 09:13 setup.sh.local
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas   1004091 Jan 16 09:13 agis_schedconf.cvmfs.json
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas   1516246 Jan 16 09:13 agis_ddmendpoints.agis.ALL.json
[2026-01-16 10:17:28] drwx------. 5 boincer umatlas      4096 Jan 16 09:13 pilot3
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas      6944 Jan 16 10:12 init_data.xml
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas 150336388 Jan 16 10:16 HITS.48215263._050491.pool.root.1
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas       530 Jan 16 10:16 boinc_task_state.xml
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas        95 Jan 16 10:16 pilot_heartbeat.json
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas      1030 Jan 16 10:16 memory_monitor_summary.json
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas    332007 Jan 16 10:16 log.48215263._050491.job.log.tgz.1
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas      7769 Jan 16 10:16 heartbeat.json
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas        27 Jan 16 10:17 wrapper_checkpoint.txt
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas       823 Jan 16 10:17 pilotlog.txt
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas    565150 Jan 16 10:17 log.48215263._050491.job.log.1
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 16 10:17 boinc_mmap_file
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas       357 Jan 16 10:17 output.list
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas       620 Jan 16 10:17 runtime_log
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas    911360 Jan 16 10:17 result.tar.gz
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas       652 Jan 16 10:17 vFPODmx0X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmihuKDmLOAN2m.diag
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas      9337 Jan 16 10:17 runtime_log.err
[2026-01-16 10:17:28] -rw-r--r--. 1 boincer umatlas     21684 Jan 16 10:17 stderr.txt
[2026-01-16 10:17:28] HITS file was successfully produced:
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas 150336388 Jan 16 10:16 shared/HITS.pool.root.1
[2026-01-16 10:17:28]  *** Contents of shared directory: ***
[2026-01-16 10:17:28] total 729592
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas 595229666 Jan 16 09:13 ATLAS.root_0
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas    592409 Jan 16 09:13 input.tar.gz
[2026-01-16 10:17:28] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 09:13 start_atlas.sh
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas 150336388 Jan 16 10:16 HITS.pool.root.1
[2026-01-16 10:17:28] -rw-------. 1 boincer umatlas    911360 Jan 16 10:17 result.tar.gz
10:17:50 (3984284): run_atlas exited; CPU time 21062.357459
10:17:50 (3984284): called boinc_finish(0)

</stderr_txt>
]]>

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