Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:36 (2080142): wrapper (7.7.26015): starting
17:04:36 (2080142): wrapper: running run_atlas (--nthreads 4)
[2026-01-16 17:04:36] Arguments: --nthreads 4
[2026-01-16 17:04:36] Threads: 4
[2026-01-16 17:04:36] Checking for CVMFS
[2026-01-16 17:04:36] No cvmfs_config command found, will try listing directly
[2026-01-16 17:04:36] CVMFS is ok
[2026-01-16 17:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 17:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 17:04:36] Further information can be found at the LHC@home message board.
[2026-01-16 17:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 17:04:36] Checking for apptainer binary...
[2026-01-16 17:04:36] which: no apptainer in ((null))
[2026-01-16 17:04:36] apptainer is not installed, using version from CVMFS
[2026-01-16 17:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 17:04:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-16 17:04:36] apptainer works
[2026-01-16 17:04:36] Set ATHENA_PROC_NUMBER=4
[2026-01-16 17:04:36] Set ATHENA_CORE_NUMBER=4
[2026-01-16 17:04:36] Starting ATLAS job with PandaID=6966861457
[2026-01-16 17:04:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:15:29 (2685644): wrapper (7.7.26015): starting
00:15:29 (2685644): wrapper: running run_atlas (--nthreads 4)
[2026-01-17 00:15:29] Arguments: --nthreads 4
[2026-01-17 00:15:29] Threads: 4
[2026-01-17 00:15:29] This job has been restarted, cleaning up previous attempt
[2026-01-17 00:15:30] Checking for CVMFS
[2026-01-17 00:15:30] No cvmfs_config command found, will try listing directly
[2026-01-17 00:15:30] CVMFS is ok
[2026-01-17 00:15:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-17 00:15:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-17 00:15:30] Further information can be found at the LHC@home message board.
[2026-01-17 00:15:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-17 00:15:30] Checking for apptainer binary...
[2026-01-17 00:15:30] which: no apptainer in ((null))
[2026-01-17 00:15:30] apptainer is not installed, using version from CVMFS
[2026-01-17 00:15:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-17 00:15:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-17 00:15:30] apptainer works
[2026-01-17 00:15:30] Set ATHENA_PROC_NUMBER=4
[2026-01-17 00:15:30] Set ATHENA_CORE_NUMBER=4
[2026-01-17 00:15:30] Starting ATLAS job with PandaID=6966861457
[2026-01-17 00:15:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-17 17:55:14]  *** The last 200 lines of the pilot log: ***
[2026-01-17 17:55:14] 2026-01-17 16:39:24,993 | INFO     | time since job start (62619s) is within the limit (349056.0s)
[2026-01-17 17:55:14] 2026-01-17 16:39:25,579 | INFO     | monitor loop #4266: job 0:6966861457 is in state 'finished'
[2026-01-17 17:55:14] 2026-01-17 16:39:25,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,110 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-17 17:55:14] 2026-01-17 16:39:26,132 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2725.349515625
[2026-01-17 17:55:14] 2026-01-17 16:39:26,155 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6966861457/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,156 | INFO     | extracted standard info from prmon json
[2026-01-17 17:55:14] 2026-01-17 16:39:26,156 | INFO     | extracted standard memory fields from prmon json
[2026-01-17 17:55:14] 2026-01-17 16:39:26,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-17 17:55:14] 2026-01-17 16:39:26,174 | INFO     | fitting pss+swap vs Time
[2026-01-17 17:55:14] 2026-01-17 16:39:26,175 | INFO     | sum of square deviations: 334903022262.335
[2026-01-17 17:55:14] 2026-01-17 16:39:26,201 | INFO     | sum of deviations: 864099205322.4241
[2026-01-17 17:55:14] 2026-01-17 16:39:26,202 | INFO     | mean x: 1768636646.5126705
[2026-01-17 17:55:14] 2026-01-17 16:39:26,202 | INFO     | mean y: 2745642.582846004
[2026-01-17 17:55:14] 2026-01-17 16:39:26,202 | INFO     | intersect: -4560597830.497522
[2026-01-17 17:55:14] 2026-01-17 16:39:26,203 | INFO     | chi2: 4.43864466573146
[2026-01-17 17:55:14] 2026-01-17 16:39:26,204 | INFO     | sum of square deviations: 330030590684.83356
[2026-01-17 17:55:14] 2026-01-17 16:39:26,229 | INFO     | sum of deviations: 1117882224660.821
[2026-01-17 17:55:14] 2026-01-17 16:39:26,230 | INFO     | mean x: 1768636494.0127325
[2026-01-17 17:55:14] 2026-01-17 16:39:26,230 | INFO     | mean y: 2753581.013712047
[2026-01-17 17:55:14] 2026-01-17 16:39:26,230 | INFO     | intersect: -5987985927.225839
[2026-01-17 17:55:14] 2026-01-17 16:39:26,231 | INFO     | chi2: 2.4537902491395727
[2026-01-17 17:55:14] 2026-01-17 16:39:26,231 | INFO     | current chi2=2.4537902491395727 (change=44.71757858690399 %)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,232 | INFO     | sum of square deviations: 325205648369.8335
[2026-01-17 17:55:14] 2026-01-17 16:39:26,260 | INFO     | sum of deviations: 1115384709878.2095
[2026-01-17 17:55:14] 2026-01-17 16:39:26,260 | INFO     | mean x: 1768636341.5127952
[2026-01-17 17:55:14] 2026-01-17 16:39:26,261 | INFO     | mean y: 2753500.252952756
[2026-01-17 17:55:14] 2026-01-17 16:39:26,261 | INFO     | intersect: -6063284843.62871
[2026-01-17 17:55:14] 2026-01-17 16:39:26,262 | INFO     | chi2: 2.4286173444219954
[2026-01-17 17:55:14] 2026-01-17 16:39:26,262 | INFO     | current chi2=2.4286173444219954 (change=1.02587842324356 %)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,262 | INFO     | right removable region: 1015
[2026-01-17 17:55:14] 2026-01-17 16:39:26,263 | INFO     | sum of square deviations: 330030645095.86176
[2026-01-17 17:55:14] 2026-01-17 16:39:26,289 | INFO     | sum of deviations: 611756669296.2361
[2026-01-17 17:55:14] 2026-01-17 16:39:26,289 | INFO     | mean x: 1768636799.011753
[2026-01-17 17:55:14] 2026-01-17 16:39:26,289 | INFO     | mean y: 2753528.063663075
[2026-01-17 17:55:14] 2026-01-17 16:39:26,290 | INFO     | intersect: -3275655230.140935
[2026-01-17 17:55:14] 2026-01-17 16:39:26,291 | INFO     | chi2: 2.1622558944906065
[2026-01-17 17:55:14] 2026-01-17 16:39:26,291 | INFO     | current chi2=2.1622558944906065 (change=51.285672602173015 %)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,292 | INFO     | sum of square deviations: 325206006555.95197
[2026-01-17 17:55:14] 2026-01-17 16:39:26,317 | INFO     | sum of deviations: 603118217175.1807
[2026-01-17 17:55:14] 2026-01-17 16:39:26,318 | INFO     | mean x: 1768636951.5068898
[2026-01-17 17:55:14] 2026-01-17 16:39:26,318 | INFO     | mean y: 2753800.6171259843
[2026-01-17 17:55:14] 2026-01-17 16:39:26,318 | INFO     | intersect: -3277312199.146183
[2026-01-17 17:55:14] 2026-01-17 16:39:26,319 | INFO     | chi2: 2.1612491684104556
[2026-01-17 17:55:14] 2026-01-17 16:39:26,320 | INFO     | current chi2=2.1612491684104556 (change=0.046559062815649005 %)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,320 | INFO     | left removable region: 20
[2026-01-17 17:55:14] 2026-01-17 16:39:26,321 | INFO     | sum of square deviations: 305454811366.99097
[2026-01-17 17:55:14] 2026-01-17 16:39:26,344 | INFO     | sum of deviations: 854968533490.1703
[2026-01-17 17:55:14] 2026-01-17 16:39:26,344 | INFO     | mean x: 1768636921.003015
[2026-01-17 17:55:14] 2026-01-17 16:39:26,344 | INFO     | mean y: 2761605.6100502512
[2026-01-17 17:55:14] 2026-01-17 16:39:26,344 | INFO     | intersect: -4947656126.752198
[2026-01-17 17:55:14] 2026-01-17 16:39:26,345 | INFO     | chi2: 0.12259119015012629
[2026-01-17 17:55:14] 2026-01-17 16:39:26,345 | INFO     | current memory leak: 2.80 B/s (using 995 data points, chi2=0.12)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,347 | INFO     | could have reported an average CPU frequency of 2706 MHz (38 samples)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,347 | INFO     | ..............................
[2026-01-17 17:55:14] 2026-01-17 16:39:26,347 | INFO     | . Timing measurements:
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . get job = 0 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . initial setup = 1 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . payload setup = 13 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . stage-in = 0 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . payload execution = 62573 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . stage-out = 3 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | . log creation = 1 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,348 | INFO     | ..............................
[2026-01-17 17:55:14] 2026-01-17 16:39:26,451 | INFO     | 
[2026-01-17 17:55:14] 2026-01-17 16:39:26,451 | INFO     | job summary report
[2026-01-17 17:55:14] 2026-01-17 16:39:26,451 | INFO     | --------------------------------------------------
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | PanDA job id: 6966861457
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | task id: 48187943
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | errors: (none)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | pilot state: finished 
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | transexitcode: 0
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | exeerrorcode: 0
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | exeerrordiag: 
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | exitcode: 0
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | exitmsg: OK
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | cpuconsumptiontime: 248389 s
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | nevents: 2050
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | neventsw: 0
[2026-01-17 17:55:14] 2026-01-17 16:39:26,452 | INFO     | pid: 2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | pgrp: 2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | corecount: 4
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | event service: False
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | sizes: {0: 2286997, 7: 2287291, 11: 2287319, 62591: 2362064, 62595: 2370030, 62604: 2370220}
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | --------------------------------------------------
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | 
[2026-01-17 17:55:14] 2026-01-17 16:39:26,453 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,483 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-17 17:55:14] 2026-01-17 16:39:26,483 | INFO     | job 6966861457 has completed (purged errors)
[2026-01-17 17:55:14] 2026-01-17 16:39:26,483 | INFO     | overall cleanup function is called
[2026-01-17 17:55:14] 2026-01-17 16:39:27,501 | INFO     | --- collectZombieJob: --- 10, [2698602]
[2026-01-17 17:55:14] 2026-01-17 16:39:27,501 | INFO     | zombie collector waiting for pid 2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:27,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-17 17:55:14] 2026-01-17 16:39:27,502 | INFO     | collected zombie processes
[2026-01-17 17:55:14] 2026-01-17 16:39:27,502 | INFO     | will attempt to kill all subprocesses of pid=2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:28,238 | INFO     | process IDs to be killed: [2698602] (in reverse order)
[2026-01-17 17:55:14] 2026-01-17 16:39:28,465 | WARNING  | found no corresponding commands to process id(s)
[2026-01-17 17:55:14] 2026-01-17 16:39:28,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-17 17:55:14] 2026-01-17 16:39:28,496 | INFO     | did not find any defunct processes belonging to 2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:28,529 | INFO     | did not find any defunct processes belonging to 2698602
[2026-01-17 17:55:14] 2026-01-17 16:39:28,529 | INFO     | ready for new job
[2026-01-17 17:55:14] 2026-01-17 16:39:28,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-17 17:55:14] 2026-01-17 16:39:28,536 | INFO     | ***************************************
[2026-01-17 17:55:14] 2026-01-17 16:39:28,536 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-17 17:55:14] 2026-01-17 16:39:28,536 | INFO     | ***************************************
[2026-01-17 17:55:14] 2026-01-17 16:39:28,536 | INFO     | 
[2026-01-17 17:55:14] 2026-01-17 16:39:28,544 | INFO     | architecture information:
[2026-01-17 17:55:14] 2026-01-17 16:39:28,545 | INFO     | executing command: cat /etc/os-release
[2026-01-17 17:55:14] 2026-01-17 16:39:28,565 | INFO     | cat /etc/os-release:
[2026-01-17 17:55:14] NAME="CentOS Linux"
[2026-01-17 17:55:14] VERSION="7 (Core)"
[2026-01-17 17:55:14] ID="centos"
[2026-01-17 17:55:14] ID_LIKE="rhel fedora"
[2026-01-17 17:55:14] VERSION_ID="7"
[2026-01-17 17:55:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-17 17:55:14] ANSI_COLOR="0;31"
[2026-01-17 17:55:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-17 17:55:14] HOME_URL="https://www.centos.org/"
[2026-01-17 17:55:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-17 17:55:14] 
[2026-01-17 17:55:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-17 17:55:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-17 17:55:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-17 17:55:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-17 17:55:14] 
[2026-01-17 17:55:14] 2026-01-17 16:39:28,566 | INFO     | ***************************************
[2026-01-17 17:55:14] 2026-01-17 16:39:29,069 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-17 17:55:14] 2026-01-17 16:39:29,090 | INFO     | sufficient remaining disk space (3254338453504 B)
[2026-01-17 17:55:14] 2026-01-17 16:39:29,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-17 17:55:14] 2026-01-17 16:39:29,091 | INFO     | current server update state: UPDATING_FINAL
[2026-01-17 17:55:14] 2026-01-17 16:39:29,091 | INFO     | update_server=False
[2026-01-17 17:55:14] 2026-01-17 16:39:29,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-17 17:55:14] 2026-01-17 16:39:29,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-17 17:55:14] 2026-01-17 16:39:29,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-17 17:55:14] 2026-01-17 16:39:29,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-17 17:55:14] 2026-01-17 16:39:29,092 | INFO     | aborting loop
[2026-01-17 17:55:14] 2026-01-17 16:39:29,236 | INFO     | all data control threads have been joined
[2026-01-17 17:55:14] 2026-01-17 16:39:29,612 | INFO     | all payload control threads have been joined
[2026-01-17 17:55:14] 2026-01-17 16:39:29,642 | INFO     | all job control threads have been joined
[2026-01-17 17:55:14] 2026-01-17 16:39:30,093 | INFO     | [job] retrieve thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,098 | INFO     | [job] job monitor thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,241 | INFO     | [data] control thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,386 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,501 | INFO     | [job] validate thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,617 | INFO     | [payload] control thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,648 | INFO     | [job] control thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:30,750 | INFO     | [payload] validate_post thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,099 | INFO     | [data] copytool_out thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,451 | INFO     | [job] create_data_payload thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-17 17:55:14] 2026-01-17 16:39:31,469 | INFO     | [data] copytool_in thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,566 | INFO     | [payload] validate_pre thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:31,674 | INFO     | [payload] failed_post thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:32,463 | INFO     | [job] queue monitor thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:33,098 | INFO     | [data] queue_monitor thread has finished
[2026-01-17 17:55:14] 2026-01-17 16:39:57,076 | INFO     | 62623s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-17 17:55:14] 2026-01-17 16:39:58,990 | INFO     | PID=2690119 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-17 17:55:14] 2026-01-17 16:39:58,991 | INFO     | .. there are 4 such processes running
[2026-01-17 17:55:14] 2026-01-17 16:39:58,991 | INFO     | found 0 job(s) in 20 queues
[2026-01-17 17:55:14] 2026-01-17 16:39:58,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-17 17:55:14] 2026-01-17 16:39:58,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-17 17:55:14] 2026-01-17 16:40:22,094 | INFO     | [monitor] cgroup control has ended
[2026-01-17 17:55:14] 2026-01-17 16:40:23,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22828103505728)>', '<ExcThread(monitor, started 22827855984384)>']
[2026-01-17 17:55:14] 2026-01-17 16:40:24,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-17 17:55:14] 2026-01-17 16:40:24,100 | INFO     | [monitor] control thread has ended
[2026-01-17 17:55:14] 2026-01-17 16:40:28,354 | INFO     | all workflow threads have been joined
[2026-01-17 17:55:14] 2026-01-17 16:40:28,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-17 17:55:14] 2026-01-17 16:40:28,355 | INFO     | traces error code: 0
[2026-01-17 17:55:14] 2026-01-17 16:40:28,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-17 17:55:14] 2026-01-17 16:40:28,491 [wrapper] ==== pilot stdout END ====
[2026-01-17 17:55:14] 2026-01-17 16:40:28,495 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-17 17:55:14] 2026-01-17 16:40:28,499 [wrapper] pilotpid: 2690119
[2026-01-17 17:55:14] 2026-01-17 16:40:28,502 [wrapper] Pilot exit status: 0
[2026-01-17 17:55:14] 2026-01-17 16:40:28,515 [wrapper] pandaids: 6966861457 6966861457
[2026-01-17 17:55:14] 2026-01-17 16:40:28,679 [wrapper] cleanup supervisor_pilot 3678512 2690120
[2026-01-17 17:55:14] 2026-01-17 16:40:28,683 [wrapper] Test setup, not cleaning
[2026-01-17 17:55:14] 2026-01-17 16:40:28,686 [wrapper] apfmon messages muted
[2026-01-17 17:55:14] 2026-01-17 16:40:28,690 [wrapper] ==== wrapper stdout END ====
[2026-01-17 17:55:14] 2026-01-17 16:40:28,694 [wrapper] ==== wrapper stderr END ====
[2026-01-17 17:55:14]  *** Error codes and diagnostics ***
[2026-01-17 17:55:14]     "exeErrorCode": 0,
[2026-01-17 17:55:14]     "exeErrorDiag": "",
[2026-01-17 17:55:14]     "pilotErrorCode": 0,
[2026-01-17 17:55:14]     "pilotErrorDiag": "",
[2026-01-17 17:55:14]  *** Listing of results directory ***
[2026-01-17 17:55:14] total 2422960
[2026-01-17 17:55:14] drwx------ 5 boinc boinc       4096 Dec  3 15:30 pilot3
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc     579449 Jan 12 09:50 pilot3.tar.gz
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc       5112 Jan 12 09:53 queuedata.json
[2026-01-17 17:55:14] -rwx------ 1 boinc boinc      36322 Jan 12 09:54 runpilot2-wrapper.sh
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc        100 Jan 16 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-17 17:55:14] -rwxr-xr-x 1 boinc boinc       7986 Jan 16 17:04 run_atlas
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc        105 Jan 16 17:04 job.xml
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  322660986 Jan 16 17:04 EVNT.48118027._000224.pool.root.1
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  322660986 Jan 16 17:04 ATLAS.root_0
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  319651866 Jan 16 17:04 EVNT.48118027._000225.pool.root.1
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  319651866 Jan 16 17:04 ATLAS.root_1
[2026-01-17 17:55:14] -rw-r--r-- 2 boinc boinc      15897 Jan 16 17:04 start_atlas.sh
[2026-01-17 17:55:14] drwxrwx--x 2 boinc boinc       4096 Jan 16 17:04 shared
[2026-01-17 17:55:14] -rw-r--r-- 2 boinc boinc     592698 Jan 16 17:04 input.tar.gz
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc          0 Jan 16 17:04 boinc_lockfile
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc       3436 Jan 17 00:15 pandaJob.out
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc       6699 Jan 17 00:15 init_data.xml
[2026-01-17 17:55:14] -rw------- 1 boinc boinc    1004099 Jan 17 00:15 agis_schedconf.cvmfs.json
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc        532 Jan 17 17:32 boinc_task_state.xml
[2026-01-17 17:55:14] -rw------- 1 boinc boinc 1171192764 Jan 17 17:38 HITS.48187943._001093.pool.root.1
[2026-01-17 17:55:14] -rw------- 1 boinc boinc       1038 Jan 17 17:39 memory_monitor_summary.json
[2026-01-17 17:55:14] -rw------- 1 boinc boinc    1516246 Jan 17 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-17 17:55:14] -rw------- 1 boinc boinc    1998641 Jan 17 17:39 log.48187943._001093.job.log.tgz.1
[2026-01-17 17:55:14] -rw------- 1 boinc boinc         96 Jan 17 17:39 pilot_heartbeat.json
[2026-01-17 17:55:14] -rw------- 1 boinc boinc      26699 Jan 17 17:39 heartbeat.json
[2026-01-17 17:55:14] -rw------- 1 boinc boinc       4952 Jan 17 17:40 pilotlog.txt
[2026-01-17 17:55:14] -rw------- 1 boinc boinc    8652566 Jan 17 17:40 log.48187943._001093.job.log.1
[2026-01-17 17:55:14] -rw------- 1 boinc boinc        353 Jan 17 17:40 output.list
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc        620 Jan 17 17:40 runtime_log
[2026-01-17 17:55:14] -rw------- 1 boinc boinc   10690560 Jan 17 17:40 result.tar.gz
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc       9429 Jan 17 17:40 runtime_log.err
[2026-01-17 17:55:14] -rw------- 1 boinc boinc        795 Jan 17 17:40 QKuKDmrrSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrHnKDmWWSopn.diag
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc         28 Jan 17 17:55 wrapper_checkpoint.txt
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc       8192 Jan 17 17:55 boinc_mmap_file
[2026-01-17 17:55:14] -rw-r--r-- 1 boinc boinc      22931 Jan 17 17:55 stderr.txt
[2026-01-17 17:55:14] HITS file was successfully produced:
[2026-01-17 17:55:14] -rw------- 1 boinc boinc 1171192764 Jan 17 17:38 shared/HITS.pool.root.1
[2026-01-17 17:55:14]  *** Contents of shared directory: ***
[2026-01-17 17:55:14] total 1782056
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  322660986 Jan 16 17:04 ATLAS.root_0
[2026-01-17 17:55:14] -rw-r--r-- 3 boinc boinc  319651866 Jan 16 17:04 ATLAS.root_1
[2026-01-17 17:55:14] -rw-r--r-- 2 boinc boinc      15897 Jan 16 17:04 start_atlas.sh
[2026-01-17 17:55:14] -rw-r--r-- 2 boinc boinc     592698 Jan 16 17:04 input.tar.gz
[2026-01-17 17:55:14] -rw------- 1 boinc boinc 1171192764 Jan 17 17:38 HITS.pool.root.1
[2026-01-17 17:55:14] -rw------- 1 boinc boinc   10690560 Jan 17 17:40 result.tar.gz
17:55:15 (2685644): run_atlas exited; CPU time 251488.136428
17:55:15 (2685644): called boinc_finish(0)

</stderr_txt>
]]>

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