Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:23 (4188881): wrapper (7.7.26015): starting
07:03:23 (4188881): wrapper: running run_atlas (--nthreads 8)
[2026-01-16 07:03:23] Arguments: --nthreads 8
[2026-01-16 07:03:23] Threads: 8
[2026-01-16 07:03:23] Checking for CVMFS
[2026-01-16 07:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 07:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 07:03:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 07:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 07:03:25] 2.13.3.0 12348 103466 394996 155206 0 384 22739984 32935937 16167 16776704 0 369934571 99.491 486993586 34610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-16 07:03:25] CVMFS is ok
[2026-01-16 07:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 07:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 07:03:25] Further information can be found at the LHC@home message board.
[2026-01-16 07:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 07:03:25] Checking for apptainer binary...
[2026-01-16 07:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 07:03:25] Running /usr/bin/apptainer --version
[2026-01-16 07:03:25] apptainer version 1.4.5-2.el9
[2026-01-16 07:03:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 07:03:26] c6-12-27-2.aglt2.org
[2026-01-16 07:03:26] apptainer works
[2026-01-16 07:03:26] Set ATHENA_PROC_NUMBER=8
[2026-01-16 07:03:26] Set ATHENA_CORE_NUMBER=8
[2026-01-16 07:03:26] Starting ATLAS job with PandaID=6963188830
[2026-01-16 07:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 10:59:10]  *** The last 200 lines of the pilot log: ***
[2026-01-16 10:59:10] 2026-01-16 15:58:30,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 10:59:10] 2026-01-16 15:58:30,702 | INFO     | time since job start (14048s) is within the limit (349056.0s)
[2026-01-16 10:59:10] 2026-01-16 15:58:32,710 | INFO     | time since job start (14050s) is within the limit (349056.0s)
[2026-01-16 10:59:10] 2026-01-16 15:58:32,726 | INFO     | monitor loop #879: job 0:6963188830 is in state 'finished'
[2026-01-16 10:59:10] 2026-01-16 15:58:32,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 10:59:10] 2026-01-16 15:58:34,717 | INFO     | time since job start (14052s) is within the limit (349056.0s)
[2026-01-16 10:59:10] 2026-01-16 15:58:35,232 | INFO     | monitor loop #880: job 0:6963188830 is in state 'finished'
[2026-01-16 10:59:10] 2026-01-16 15:58:35,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,724 | INFO     | time since job start (14054s) is within the limit (349056.0s)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,776 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-16 10:59:10] 2026-01-16 15:58:36,789 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2665.6404999999995
[2026-01-16 10:59:10] 2026-01-16 15:58:36,811 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963188830/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,812 | INFO     | extracted standard info from prmon json
[2026-01-16 10:59:10] 2026-01-16 15:58:36,812 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 10:59:10] 2026-01-16 15:58:36,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 10:59:10] 2026-01-16 15:58:36,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 10:59:10] 2026-01-16 15:58:36,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 10:59:10] 2026-01-16 15:58:36,818 | INFO     | fitting pss+swap vs Time
[2026-01-16 10:59:10] 2026-01-16 15:58:36,818 | INFO     | sum of square deviations: 3723814440.6899486
[2026-01-16 10:59:10] 2026-01-16 15:58:36,820 | INFO     | sum of deviations: 51822560109.471634
[2026-01-16 10:59:10] 2026-01-16 15:58:36,820 | INFO     | mean x: 1768572135.1004367
[2026-01-16 10:59:10] 2026-01-16 15:58:36,820 | INFO     | mean y: 2476667.2838427946
[2026-01-16 10:59:10] 2026-01-16 15:58:36,820 | INFO     | intersect: -24609903256.297337
[2026-01-16 10:59:10] 2026-01-16 15:58:36,820 | INFO     | chi2: 2.890190925102054
[2026-01-16 10:59:10] 2026-01-16 15:58:36,821 | INFO     | sum of square deviations: 3485193725.6384006
[2026-01-16 10:59:10] 2026-01-16 15:58:36,822 | INFO     | sum of deviations: 64870832247.6384
[2026-01-16 10:59:10] 2026-01-16 15:58:36,822 | INFO     | mean x: 1768571982.6026785
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | mean y: 2484843.6026785714
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | intersect: -32916413052.173878
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | chi2: 2.211343492780328
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | current chi2=2.211343492780328 (change=23.487978819176305 %)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | right removable region: 223
[2026-01-16 10:59:10] 2026-01-16 15:58:36,823 | INFO     | sum of square deviations: 3485179695.6384006
[2026-01-16 10:59:10] 2026-01-16 15:58:36,825 | INFO     | sum of deviations: 2346897656.366068
[2026-01-16 10:59:10] 2026-01-16 15:58:36,825 | INFO     | mean x: 1768572287.6026785
[2026-01-16 10:59:10] 2026-01-16 15:58:36,825 | INFO     | mean y: 2508078.723214286
[2026-01-16 10:59:10] 2026-01-16 15:58:36,825 | INFO     | intersect: -1188437157.7829916
[2026-01-16 10:59:10] 2026-01-16 15:58:36,826 | INFO     | chi2: 0.7373718966754416
[2026-01-16 10:59:10] 2026-01-16 15:58:36,826 | INFO     | current chi2=0.7373718966754416 (change=74.48708698545911 %)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,826 | INFO     | sum of square deviations: 3256963750.584459
[2026-01-16 10:59:10] 2026-01-16 15:58:36,827 | INFO     | sum of deviations: -3783448083.305933
[2026-01-16 10:59:10] 2026-01-16 15:58:36,827 | INFO     | mean x: 1768572440.105023
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | mean y: 2512150.187214612
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | intersect: 2056972230.5311544
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | chi2: 0.7050692443004374
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | current chi2=0.7050692443004374 (change=4.380781600254339 %)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | left removable region: 20
[2026-01-16 10:59:10] 2026-01-16 15:58:36,828 | INFO     | sum of square deviations: 2594007697.615759
[2026-01-16 10:59:10] 2026-01-16 15:58:36,830 | INFO     | sum of deviations: 5652704387.596062
[2026-01-16 10:59:10] 2026-01-16 15:58:36,830 | INFO     | mean x: 1768572562.1083744
[2026-01-16 10:59:10] 2026-01-16 15:58:36,830 | INFO     | mean y: 2524640.4729064037
[2026-01-16 10:59:10] 2026-01-16 15:58:36,830 | INFO     | intersect: -3851441518.070416
[2026-01-16 10:59:10] 2026-01-16 15:58:36,830 | INFO     | chi2: 0.0015528109814885733
[2026-01-16 10:59:10] 2026-01-16 15:58:36,831 | INFO     | current memory leak: 2.18 B/s (using 203 data points, chi2=0.00)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,831 | INFO     | could have reported an average CPU frequency of 2625 MHz (11 samples)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,831 | INFO     | ..............................
[2026-01-16 10:59:10] 2026-01-16 15:58:36,831 | INFO     | . Timing measurements:
[2026-01-16 10:59:10] 2026-01-16 15:58:36,831 | INFO     | . get job = 0 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . initial setup = 3 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . payload setup = 31 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . stage-in = 0 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . payload execution = 13940 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . stage-out = 5 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | . log creation = 0 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,832 | INFO     | ..............................
[2026-01-16 10:59:10] 2026-01-16 15:58:36,931 | INFO     | 
[2026-01-16 10:59:10] 2026-01-16 15:58:36,931 | INFO     | job summary report
[2026-01-16 10:59:10] 2026-01-16 15:58:36,931 | INFO     | --------------------------------------------------
[2026-01-16 10:59:10] 2026-01-16 15:58:36,931 | INFO     | PanDA job id: 6963188830
[2026-01-16 10:59:10] 2026-01-16 15:58:36,931 | INFO     | task id: 47898826
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | errors: (none)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | pilot state: finished 
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | transexitcode: 0
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | exeerrorcode: 0
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | exeerrordiag: 
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | exitcode: 0
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | exitmsg: OK
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | cpuconsumptiontime: 60211 s
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | nevents: 400
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | neventsw: 0
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | pid: 29588
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | pgrp: 29588
[2026-01-16 10:59:10] 2026-01-16 15:58:36,932 | INFO     | corecount: 8
[2026-01-16 10:59:10] 2026-01-16 15:58:36,933 | INFO     | event service: False
[2026-01-16 10:59:10] 2026-01-16 15:58:36,933 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 27: 2284317, 34: 2284345, 13975: 2314808, 13981: 2323806, 13984: 2323862, 13997: 2324056}
[2026-01-16 10:59:10] 2026-01-16 15:58:36,933 | INFO     | --------------------------------------------------
[2026-01-16 10:59:10] 2026-01-16 15:58:36,933 | INFO     | 
[2026-01-16 10:59:10] 2026-01-16 15:58:36,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-16 10:59:10] 2026-01-16 15:58:36,955 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | job 6963188830 has completed (purged errors)
[2026-01-16 10:59:10] 2026-01-16 15:58:36,957 | INFO     | overall cleanup function is called
[2026-01-16 10:59:10] 2026-01-16 15:58:37,971 | INFO     | --- collectZombieJob: --- 10, [29588]
[2026-01-16 10:59:10] 2026-01-16 15:58:37,971 | INFO     | zombie collector waiting for pid 29588
[2026-01-16 10:59:10] 2026-01-16 15:58:37,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 10:59:10] 2026-01-16 15:58:37,971 | INFO     | collected zombie processes
[2026-01-16 10:59:10] 2026-01-16 15:58:37,971 | INFO     | will attempt to kill all subprocesses of pid=29588
[2026-01-16 10:59:10] 2026-01-16 15:58:38,825 | INFO     | process IDs to be killed: [29588] (in reverse order)
[2026-01-16 10:59:10] 2026-01-16 15:58:39,009 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 10:59:10] 2026-01-16 15:58:39,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 10:59:10] 2026-01-16 15:58:39,033 | INFO     | did not find any defunct processes belonging to 29588
[2026-01-16 10:59:10] 2026-01-16 15:58:39,057 | INFO     | did not find any defunct processes belonging to 29588
[2026-01-16 10:59:10] 2026-01-16 15:58:39,057 | INFO     | ready for new job
[2026-01-16 10:59:10] 2026-01-16 15:58:39,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 10:59:10] 2026-01-16 15:58:39,059 | INFO     | ***************************************
[2026-01-16 10:59:10] 2026-01-16 15:58:39,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 10:59:10] 2026-01-16 15:58:39,060 | INFO     | ***************************************
[2026-01-16 10:59:10] 2026-01-16 15:58:39,060 | INFO     | 
[2026-01-16 10:59:10] 2026-01-16 15:58:39,066 | INFO     | architecture information:
[2026-01-16 10:59:10] 2026-01-16 15:58:39,067 | INFO     | executing command: cat /etc/os-release
[2026-01-16 10:59:10] 2026-01-16 15:58:39,085 | INFO     | cat /etc/os-release:
[2026-01-16 10:59:10] NAME="CentOS Linux"
[2026-01-16 10:59:10] VERSION="7 (Core)"
[2026-01-16 10:59:10] ID="centos"
[2026-01-16 10:59:10] ID_LIKE="rhel fedora"
[2026-01-16 10:59:10] VERSION_ID="7"
[2026-01-16 10:59:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 10:59:10] ANSI_COLOR="0;31"
[2026-01-16 10:59:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 10:59:10] HOME_URL="https://www.centos.org/"
[2026-01-16 10:59:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 10:59:10] 
[2026-01-16 10:59:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 10:59:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 10:59:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 10:59:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 10:59:10] 
[2026-01-16 10:59:10] 2026-01-16 15:58:39,085 | INFO     | ***************************************
[2026-01-16 10:59:10] 2026-01-16 15:58:39,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-16 10:59:10] 2026-01-16 15:58:39,643 | INFO     | sufficient remaining disk space (95278858240 B)
[2026-01-16 10:59:10] 2026-01-16 15:58:39,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 10:59:10] 2026-01-16 15:58:39,644 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 10:59:10] 2026-01-16 15:58:39,644 | INFO     | update_server=False
[2026-01-16 10:59:10] 2026-01-16 15:58:39,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 10:59:10] 2026-01-16 15:58:39,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 10:59:10] 2026-01-16 15:58:39,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 10:59:10] 2026-01-16 15:58:39,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 10:59:10] 2026-01-16 15:58:39,645 | INFO     | aborting loop
[2026-01-16 10:59:10] 2026-01-16 15:58:40,193 | INFO     | all payload control threads have been joined
[2026-01-16 10:59:10] 2026-01-16 15:58:40,379 | INFO     | all job control threads have been joined
[2026-01-16 10:59:10] 2026-01-16 15:58:40,589 | INFO     | all data control threads have been joined
[2026-01-16 10:59:10] 2026-01-16 15:58:40,650 | INFO     | [job] retrieve thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:40,651 | INFO     | [job] job monitor thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:40,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:40,752 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,007 | INFO     | [payload] validate_post thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,199 | INFO     | [payload] control thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,298 | INFO     | [data] copytool_in thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,312 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,385 | INFO     | [job] control thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,538 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,595 | INFO     | [data] control thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,657 | INFO     | [data] copytool_out thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,659 | INFO     | [job] validate thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:41,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 10:59:10] 2026-01-16 15:58:42,089 | INFO     | [payload] failed_post thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:42,952 | INFO     | [job] queue monitor thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:43,653 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 10:59:10] 2026-01-16 15:58:46,692 | INFO     | [monitor] cgroup control has ended
[2026-01-16 10:59:10] 2026-01-16 15:58:46,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621295687488)>', '<ExcThread(monitor, started 139621014931200)>']
[2026-01-16 10:59:10] 2026-01-16 15:58:51,725 | INFO     | all workflow threads have been joined
[2026-01-16 10:59:10] 2026-01-16 15:58:51,725 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 10:59:10] 2026-01-16 15:58:51,725 | INFO     | traces error code: 0
[2026-01-16 10:59:10] 2026-01-16 15:58:51,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 10:59:10] 2026-01-16 15:59:10,295 | INFO     | PID=5906 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-16 10:59:10] 2026-01-16 15:59:10,296 | INFO     | .. there are 21 such processes running
[2026-01-16 10:59:10] 2026-01-16 15:59:10,296 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 10:59:10] 2026-01-16 15:59:10,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 10:59:10] 2026-01-16 15:59:10,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 10:59:10] 2026-01-16 15:59:10,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 10:59:10] 2026-01-16 15:59:10,297 | INFO     | [monitor] control thread has ended
[2026-01-16 10:59:10] 2026-01-16 15:59:10,459 [wrapper] ==== pilot stdout END ====
[2026-01-16 10:59:10] 2026-01-16 15:59:10,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 10:59:10] 2026-01-16 15:59:10,463 [wrapper] pilotpid: 5906
[2026-01-16 10:59:10] 2026-01-16 15:59:10,465 [wrapper] Pilot exit status: 0
[2026-01-16 10:59:10] 2026-01-16 15:59:10,519 [wrapper] pandaids: 6963188830
[2026-01-16 10:59:10] 2026-01-16 15:59:10,666 [wrapper] cleanup supervisor_pilot 1075519 5907
[2026-01-16 10:59:10] 2026-01-16 15:59:10,670 [wrapper] Test setup, not cleaning
[2026-01-16 10:59:10] 2026-01-16 15:59:10,673 [wrapper] apfmon messages muted
[2026-01-16 10:59:10] 2026-01-16 15:59:10,675 [wrapper] ==== wrapper stdout END ====
[2026-01-16 10:59:10] 2026-01-16 15:59:10,677 [wrapper] ==== wrapper stderr END ====
[2026-01-16 10:59:10]  *** Error codes and diagnostics ***
[2026-01-16 10:59:10]     "exeErrorCode": 0,
[2026-01-16 10:59:10]     "exeErrorDiag": "",
[2026-01-16 10:59:10]     "pilotErrorCode": 0,
[2026-01-16 10:59:10]     "pilotErrorDiag": "",
[2026-01-16 10:59:10]  *** Listing of results directory ***
[2026-01-16 10:59:10] total 439796
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-16 10:59:10] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas       100 Jan 16 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 10:59:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 16 07:03 run_atlas
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas       105 Jan 16 07:03 job.xml
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas 224240610 Jan 16 07:03 EVNT.47898824._001449.pool.root.1
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 07:03 start_atlas.sh
[2026-01-16 10:59:10] drwxrwx--x. 2 boincer umatlas      4096 Jan 16 07:03 shared
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas    592406 Jan 16 07:03 input.tar.gz
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas         0 Jan 16 07:03 boinc_lockfile
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas      2520 Jan 16 07:03 pandaJob.out
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas        57 Jan 16 07:03 setup.sh.local
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas   1004075 Jan 16 07:04 agis_schedconf.cvmfs.json
[2026-01-16 10:59:10] drwx------. 5 boincer umatlas      4096 Jan 16 07:04 pilot3
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas      6879 Jan 16 10:57 init_data.xml
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas 217652332 Jan 16 10:57 HITS.47898826._037767.pool.root.1
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas       531 Jan 16 10:57 boinc_task_state.xml
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas      1044 Jan 16 10:58 memory_monitor_summary.json
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas   1516246 Jan 16 10:58 agis_ddmendpoints.agis.ALL.json
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas    460842 Jan 16 10:58 log.47898826._037767.job.log.tgz.1
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas      7830 Jan 16 10:58 heartbeat.json
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas      8192 Jan 16 10:58 boinc_mmap_file
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas        28 Jan 16 10:58 wrapper_checkpoint.txt
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas        95 Jan 16 10:59 pilot_heartbeat.json
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas       820 Jan 16 10:59 pilotlog.txt
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas   1799534 Jan 16 10:59 log.47898826._037767.job.log.1
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas       357 Jan 16 10:59 output.list
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas       620 Jan 16 10:59 runtime_log
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas   2283520 Jan 16 10:59 result.tar.gz
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas      9353 Jan 16 10:59 runtime_log.err
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas       658 Jan 16 10:59 HLKKDm9EJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5KmKDmAgSxPo.diag
[2026-01-16 10:59:10] -rw-r--r--. 1 boincer umatlas     21428 Jan 16 10:59 stderr.txt
[2026-01-16 10:59:10] HITS file was successfully produced:
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas 217652332 Jan 16 10:57 shared/HITS.pool.root.1
[2026-01-16 10:59:10]  *** Contents of shared directory: ***
[2026-01-16 10:59:10] total 434376
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas 224240610 Jan 16 07:03 ATLAS.root_0
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 07:03 start_atlas.sh
[2026-01-16 10:59:10] -rw-r--r--. 2 boincer umatlas    592406 Jan 16 07:03 input.tar.gz
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas 217652332 Jan 16 10:57 HITS.pool.root.1
[2026-01-16 10:59:10] -rw-------. 1 boincer umatlas   2283520 Jan 16 10:59 result.tar.gz
10:59:12 (4188881): run_atlas exited; CPU time 60842.610394
10:59:12 (4188881): called boinc_finish(0)

</stderr_txt>
]]>

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