Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:06 (4187035): wrapper (7.7.26015): starting
07:03:06 (4187035): wrapper: running run_atlas (--nthreads 8)
[2026-01-16 07:03:06] Arguments: --nthreads 8
[2026-01-16 07:03:06] Threads: 8
[2026-01-16 07:03:06] Checking for CVMFS
[2026-01-16 07:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 07:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 07:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 07:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 07:03:08] 2.13.3.0 12348 103466 394996 155206 0 384 22739742 32935936 16140 16776704 0 369931457 99.491 486993448 34610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-16 07:03:08] CVMFS is ok
[2026-01-16 07:03:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 07:03:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 07:03:08] Further information can be found at the LHC@home message board.
[2026-01-16 07:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 07:03:08] Checking for apptainer binary...
[2026-01-16 07:03:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 07:03:08] Running /usr/bin/apptainer --version
[2026-01-16 07:03:08] apptainer version 1.4.5-2.el9
[2026-01-16 07:03:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 07:03:09] c6-12-27-2.aglt2.org
[2026-01-16 07:03:09] apptainer works
[2026-01-16 07:03:09] Set ATHENA_PROC_NUMBER=8
[2026-01-16 07:03:09] Set ATHENA_CORE_NUMBER=8
[2026-01-16 07:03:09] Starting ATLAS job with PandaID=6963188586
[2026-01-16 07:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 11:00:43]  *** The last 200 lines of the pilot log: ***
[2026-01-16 11:00:43] 2026-01-16 15:59:33,524 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2625.6955104166655
[2026-01-16 11:00:43] 2026-01-16 15:59:33,542 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188586/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,543 | INFO     | extracted standard info from prmon json
[2026-01-16 11:00:43] 2026-01-16 15:59:33,543 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 11:00:43] 2026-01-16 15:59:33,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 11:00:43] 2026-01-16 15:59:33,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 11:00:43] 2026-01-16 15:59:33,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 11:00:43] 2026-01-16 15:59:33,547 | INFO     | fitting pss+swap vs Time
[2026-01-16 11:00:43] 2026-01-16 15:59:33,548 | INFO     | sum of square deviations: 3772807789.047828
[2026-01-16 11:00:43] 2026-01-16 15:59:33,549 | INFO     | sum of deviations: 53740462539.19134
[2026-01-16 11:00:43] 2026-01-16 15:59:33,549 | INFO     | mean x: 1768572162.6391304
[2026-01-16 11:00:43] 2026-01-16 15:59:33,550 | INFO     | mean y: 2476475.5565217393
[2026-01-16 11:00:43] 2026-01-16 15:59:33,550 | INFO     | intersect: -25189341228.507256
[2026-01-16 11:00:43] 2026-01-16 15:59:33,550 | INFO     | chi2: 3.1163674505484886
[2026-01-16 11:00:43] 2026-01-16 15:59:33,550 | INFO     | sum of square deviations: 3532078151.448889
[2026-01-16 11:00:43] 2026-01-16 15:59:33,552 | INFO     | sum of deviations: 68461174356.38667
[2026-01-16 11:00:43] 2026-01-16 15:59:33,552 | INFO     | mean x: 1768572010.1422222
[2026-01-16 11:00:43] 2026-01-16 15:59:33,552 | INFO     | mean y: 2485620.7066666665
[2026-01-16 11:00:43] 2026-01-16 15:59:33,552 | INFO     | intersect: -34277196639.01471
[2026-01-16 11:00:43] 2026-01-16 15:59:33,553 | INFO     | chi2: 2.269098184007392
[2026-01-16 11:00:43] 2026-01-16 15:59:33,553 | INFO     | current chi2=2.269098184007392 (change=27.18772031815359 %)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,553 | INFO     | sum of square deviations: 3301786496.909075
[2026-01-16 11:00:43] 2026-01-16 15:59:33,554 | INFO     | sum of deviations: 66797800892.63635
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | mean x: 1768571857.6363637
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | mean y: 2484518.9954545456
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | intersect: -35777148997.982704
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | chi2: 2.269314983953151
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | current chi2=2.269314983953151 (change=-0.009554454156588168 %)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,555 | INFO     | right removable region: 219
[2026-01-16 11:00:43] 2026-01-16 15:59:33,556 | INFO     | sum of square deviations: 3532058631.448889
[2026-01-16 11:00:43] 2026-01-16 15:59:33,557 | INFO     | sum of deviations: 3249278407.2177715
[2026-01-16 11:00:43] 2026-01-16 15:59:33,557 | INFO     | mean x: 1768572315.1422222
[2026-01-16 11:00:43] 2026-01-16 15:59:33,557 | INFO     | mean y: 2508258.5244444446
[2026-01-16 11:00:43] 2026-01-16 15:59:33,557 | INFO     | intersect: -1624470349.3695745
[2026-01-16 11:00:43] 2026-01-16 15:59:33,558 | INFO     | chi2: 0.9302799657793671
[2026-01-16 11:00:43] 2026-01-16 15:59:33,558 | INFO     | current chi2=0.9302799657793671 (change=70.14857905746527 %)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,558 | INFO     | sum of square deviations: 3301774786.345449
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | sum of deviations: -4036881572.9818115
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | mean x: 1768572467.6454546
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | mean y: 2513046.2181818183
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | intersect: 2164840299.623385
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | chi2: 0.8822944730082014
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | current chi2=0.8822944730082014 (change=5.158177595597747 %)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,560 | INFO     | left removable region: 20
[2026-01-16 11:00:43] 2026-01-16 15:59:33,561 | INFO     | sum of square deviations: 2443646120.773879
[2026-01-16 11:00:43] 2026-01-16 15:59:33,562 | INFO     | sum of deviations: 6448090762.638192
[2026-01-16 11:00:43] 2026-01-16 15:59:33,562 | INFO     | mean x: 1768572437.1457286
[2026-01-16 11:00:43] 2026-01-16 15:59:33,562 | INFO     | mean y: 2526619.6331658293
[2026-01-16 11:00:43] 2026-01-16 15:59:33,562 | INFO     | intersect: -4664235682.023007
[2026-01-16 11:00:43] 2026-01-16 15:59:33,563 | INFO     | chi2: 0.0023975796530573555
[2026-01-16 11:00:43] 2026-01-16 15:59:33,563 | INFO     | current memory leak: 2.64 B/s (using 199 data points, chi2=0.00)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,563 | INFO     | could have reported an average CPU frequency of 2627 MHz (11 samples)
[2026-01-16 11:00:43] 2026-01-16 15:59:33,563 | INFO     | ..............................
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . Timing measurements:
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . get job = 0 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . initial setup = 5 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . payload setup = 37 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . stage-in = 0 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . payload execution = 13999 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . stage-out = 2 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | . log creation = 0 s
[2026-01-16 11:00:43] 2026-01-16 15:59:33,564 | INFO     | ..............................
[2026-01-16 11:00:43] 2026-01-16 15:59:34,089 | INFO     | 
[2026-01-16 11:00:43] 2026-01-16 15:59:34,089 | INFO     | job summary report
[2026-01-16 11:00:43] 2026-01-16 15:59:34,089 | INFO     | --------------------------------------------------
[2026-01-16 11:00:43] 2026-01-16 15:59:34,089 | INFO     | PanDA job id: 6963188586
[2026-01-16 11:00:43] 2026-01-16 15:59:34,089 | INFO     | task id: 47898826
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | errors: (none)
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | pilot state: finished 
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | transexitcode: 0
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | exeerrorcode: 0
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | exeerrordiag: 
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | exitcode: 0
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | exitmsg: OK
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | cpuconsumptiontime: 60252 s
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | nevents: 400
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | neventsw: 0
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | pid: 28943
[2026-01-16 11:00:43] 2026-01-16 15:59:34,090 | INFO     | pgrp: 28943
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | corecount: 8
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | event service: False
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 26: 2284373, 35: 2284529, 14040: 2315144, 14044: 2324142, 14047: 2324198, 14063: 2324392}
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | --------------------------------------------------
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | 
[2026-01-16 11:00:43] 2026-01-16 15:59:34,091 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 11:00:43] 2026-01-16 15:59:34,114 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,114 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,114 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | job 6963188586 has completed (purged errors)
[2026-01-16 11:00:43] 2026-01-16 15:59:34,116 | INFO     | overall cleanup function is called
[2026-01-16 11:00:43] 2026-01-16 15:59:35,125 | INFO     | --- collectZombieJob: --- 10, [28943]
[2026-01-16 11:00:43] 2026-01-16 15:59:35,125 | INFO     | zombie collector waiting for pid 28943
[2026-01-16 11:00:43] 2026-01-16 15:59:35,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 11:00:43] 2026-01-16 15:59:35,126 | INFO     | collected zombie processes
[2026-01-16 11:00:43] 2026-01-16 15:59:35,126 | INFO     | will attempt to kill all subprocesses of pid=28943
[2026-01-16 11:00:43] 2026-01-16 15:59:35,624 | INFO     | process IDs to be killed: [28943] (in reverse order)
[2026-01-16 11:00:43] 2026-01-16 15:59:35,730 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 11:00:43] 2026-01-16 15:59:35,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 11:00:43] 2026-01-16 15:59:35,747 | INFO     | did not find any defunct processes belonging to 28943
[2026-01-16 11:00:43] 2026-01-16 15:59:35,767 | INFO     | did not find any defunct processes belonging to 28943
[2026-01-16 11:00:43] 2026-01-16 15:59:35,768 | INFO     | ready for new job
[2026-01-16 11:00:43] 2026-01-16 15:59:35,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 11:00:43] 2026-01-16 15:59:35,770 | INFO     | ***************************************
[2026-01-16 11:00:43] 2026-01-16 15:59:35,770 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 11:00:43] 2026-01-16 15:59:35,770 | INFO     | ***************************************
[2026-01-16 11:00:43] 2026-01-16 15:59:35,770 | INFO     | 
[2026-01-16 11:00:43] 2026-01-16 15:59:35,777 | INFO     | architecture information:
[2026-01-16 11:00:43] 2026-01-16 15:59:35,778 | INFO     | executing command: cat /etc/os-release
[2026-01-16 11:00:43] 2026-01-16 15:59:35,796 | INFO     | cat /etc/os-release:
[2026-01-16 11:00:43] NAME="CentOS Linux"
[2026-01-16 11:00:43] VERSION="7 (Core)"
[2026-01-16 11:00:43] ID="centos"
[2026-01-16 11:00:43] ID_LIKE="rhel fedora"
[2026-01-16 11:00:43] VERSION_ID="7"
[2026-01-16 11:00:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 11:00:43] ANSI_COLOR="0;31"
[2026-01-16 11:00:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 11:00:43] HOME_URL="https://www.centos.org/"
[2026-01-16 11:00:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 11:00:43] 
[2026-01-16 11:00:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 11:00:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 11:00:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 11:00:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 11:00:43] 
[2026-01-16 11:00:43] 2026-01-16 15:59:35,796 | INFO     | ***************************************
[2026-01-16 11:00:43] 2026-01-16 15:59:36,299 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 11:00:43] 2026-01-16 15:59:36,348 | INFO     | sufficient remaining disk space (95518982144 B)
[2026-01-16 11:00:43] 2026-01-16 15:59:36,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 11:00:43] 2026-01-16 15:59:36,351 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 11:00:43] 2026-01-16 15:59:36,351 | INFO     | update_server=False
[2026-01-16 11:00:43] 2026-01-16 15:59:36,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 11:00:43] 2026-01-16 15:59:36,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 11:00:43] 2026-01-16 15:59:36,453 | INFO     | all payload control threads have been joined
[2026-01-16 11:00:43] 2026-01-16 15:59:36,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 11:00:43] 2026-01-16 15:59:36,724 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 11:00:43] 2026-01-16 15:59:36,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 11:00:43] 2026-01-16 15:59:36,724 | INFO     | will abort loop
[2026-01-16 11:00:43] 2026-01-16 15:59:37,267 | INFO     | all data control threads have been joined
[2026-01-16 11:00:43] 2026-01-16 15:59:37,357 | INFO     | [job] retrieve thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 11:00:43] 2026-01-16 15:59:37,459 | INFO     | [payload] control thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,535 | INFO     | [job] validate thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,547 | INFO     | all job control threads have been joined
[2026-01-16 11:00:43] 2026-01-16 15:59:37,603 | INFO     | [data] copytool_in thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,617 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,730 | INFO     | [job] job monitor thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,896 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,902 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:37,942 | INFO     | [payload] failed_post thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:38,273 | INFO     | [data] control thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:38,359 | INFO     | [data] copytool_out thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:38,537 | INFO     | [payload] validate_post thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:38,555 | INFO     | [job] control thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:38,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 11:00:43] 2026-01-16 15:59:39,678 | INFO     | [job] queue monitor thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:41,413 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 11:00:43] 2026-01-16 15:59:47,219 | INFO     | job.realtimelogging is not enabled
[2026-01-16 11:00:43] 2026-01-16 15:59:48,225 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 11:00:43] 2026-01-16 16:00:07,379 | INFO     | PID=2715 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-16 11:00:43] 2026-01-16 16:00:07,380 | INFO     | .. there are 20 such processes running
[2026-01-16 11:00:43] 2026-01-16 16:00:07,380 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 11:00:43] 2026-01-16 16:00:07,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 11:00:43] 2026-01-16 16:00:07,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 11:00:43] 2026-01-16 16:00:35,912 | INFO     | [monitor] cgroup control has ended
[2026-01-16 11:00:43] 2026-01-16 16:00:37,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555346745152)>', '<ExcThread(monitor, started 140554851563264)>']
[2026-01-16 11:00:43] 2026-01-16 16:00:38,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 11:00:43] 2026-01-16 16:00:38,582 | INFO     | [monitor] control thread has ended
[2026-01-16 11:00:43] 2026-01-16 16:00:42,857 | INFO     | all workflow threads have been joined
[2026-01-16 11:00:43] 2026-01-16 16:00:42,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 11:00:43] 2026-01-16 16:00:42,857 | INFO     | traces error code: 0
[2026-01-16 11:00:43] 2026-01-16 16:00:42,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 11:00:43] 2026-01-16 16:00:43,043 [wrapper] ==== pilot stdout END ====
[2026-01-16 11:00:43] 2026-01-16 16:00:43,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 11:00:43] 2026-01-16 16:00:43,069 [wrapper] pilotpid: 2715
[2026-01-16 11:00:43] 2026-01-16 16:00:43,071 [wrapper] Pilot exit status: 0
[2026-01-16 11:00:43] 2026-01-16 16:00:43,125 [wrapper] pandaids: 6963188586
[2026-01-16 11:00:43] 2026-01-16 16:00:43,234 [wrapper] cleanup supervisor_pilot 1074410 2716
[2026-01-16 11:00:43] 2026-01-16 16:00:43,261 [wrapper] Test setup, not cleaning
[2026-01-16 11:00:43] 2026-01-16 16:00:43,280 [wrapper] apfmon messages muted
[2026-01-16 11:00:43] 2026-01-16 16:00:43,301 [wrapper] ==== wrapper stdout END ====
[2026-01-16 11:00:43] 2026-01-16 16:00:43,327 [wrapper] ==== wrapper stderr END ====
[2026-01-16 11:00:43]  *** Error codes and diagnostics ***
[2026-01-16 11:00:43]     "exeErrorCode": 0,
[2026-01-16 11:00:43]     "exeErrorDiag": "",
[2026-01-16 11:00:43]     "pilotErrorCode": 0,
[2026-01-16 11:00:43]     "pilotErrorDiag": "",
[2026-01-16 11:00:43]  *** Listing of results directory ***
[2026-01-16 11:00:43] total 440904
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-16 11:00:43] -rwx------. 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas       100 Jan 16 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 11:00:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 16 07:03 run_atlas
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas       105 Jan 16 07:03 job.xml
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas 226979283 Jan 16 07:03 EVNT.47898824._001445.pool.root.1
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 07:03 start_atlas.sh
[2026-01-16 11:00:43] drwxrwx--x. 2 boincer umatlas      4096 Jan 16 07:03 shared
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas    592398 Jan 16 07:03 input.tar.gz
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas         0 Jan 16 07:03 boinc_lockfile
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas      2520 Jan 16 07:03 pandaJob.out
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas        57 Jan 16 07:03 setup.sh.local
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas   1004075 Jan 16 07:04 agis_schedconf.cvmfs.json
[2026-01-16 11:00:43] drwx------. 5 boincer umatlas      4096 Jan 16 07:04 pilot3
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas      6879 Jan 16 10:57 init_data.xml
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas 215999646 Jan 16 10:58 HITS.47898826._037673.pool.root.1
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas       531 Jan 16 10:58 boinc_task_state.xml
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas      1044 Jan 16 10:59 memory_monitor_summary.json
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas   1516246 Jan 16 10:59 agis_ddmendpoints.agis.ALL.json
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas    471687 Jan 16 10:59 log.47898826._037673.job.log.tgz.1
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas      7832 Jan 16 10:59 heartbeat.json
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas        95 Jan 16 11:00 pilot_heartbeat.json
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 16 11:00 boinc_mmap_file
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas        28 Jan 16 11:00 wrapper_checkpoint.txt
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas      5079 Jan 16 11:00 pilotlog.txt
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas   1814306 Jan 16 11:00 log.47898826._037673.job.log.1
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas       357 Jan 16 11:00 output.list
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas       620 Jan 16 11:00 runtime_log
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas   2304000 Jan 16 11:00 result.tar.gz
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas      9353 Jan 16 11:00 runtime_log.err
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas       657 Jan 16 11:00 gYLNDm8EJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHKmKDmuEUCRm.diag
[2026-01-16 11:00:43] -rw-r--r--. 1 boincer umatlas     21199 Jan 16 11:00 stderr.txt
[2026-01-16 11:00:43] HITS file was successfully produced:
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas 215999646 Jan 16 10:58 shared/HITS.pool.root.1
[2026-01-16 11:00:43]  *** Contents of shared directory: ***
[2026-01-16 11:00:43] total 435456
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas 226979283 Jan 16 07:03 ATLAS.root_0
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas     15847 Jan 16 07:03 start_atlas.sh
[2026-01-16 11:00:43] -rw-r--r--. 2 boincer umatlas    592398 Jan 16 07:03 input.tar.gz
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas 215999646 Jan 16 10:58 HITS.pool.root.1
[2026-01-16 11:00:43] -rw-------. 1 boincer umatlas   2304000 Jan 16 11:00 result.tar.gz
11:01:06 (4187035): run_atlas exited; CPU time 60914.734037
11:01:06 (4187035): called boinc_finish(0)

</stderr_txt>
]]>

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