Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:49:48 (22670): wrapper (7.7.26015): starting
22:49:48 (22670): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 22:49:48] Arguments: --nthreads 12
[2026-01-15 22:49:48] Threads: 12
[2026-01-15 22:49:48] Checking for CVMFS
[2026-01-15 22:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:49:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:49:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:49:49] 2.11.2.0 2924 360557 100716 155194 1 1 19935994 20275201 1 130560 4 155533927 99.950 22193913 16277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 22:49:49] CVMFS is ok
[2026-01-15 22:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:49:49] Further information can be found at the LHC@home message board.
[2026-01-15 22:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:49:49] Checking for apptainer binary...
[2026-01-15 22:49:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:49:49] Running /usr/bin/apptainer --version
[2026-01-15 22:49:49] apptainer version 1.3.2-1.el7
[2026-01-15 22:49:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:49:50] c-205-28.aglt2.org
[2026-01-15 22:49:50] apptainer works
[2026-01-15 22:49:51] Set ATHENA_PROC_NUMBER=12
[2026-01-15 22:49:51] Set ATHENA_CORE_NUMBER=12
[2026-01-15 22:49:51] Starting ATLAS job with PandaID=6963151531
[2026-01-15 22:49:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 00:33:28]  *** The last 200 lines of the pilot log: ***
[2026-01-16 00:33:28] 2026-01-16 05:32:51,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 00:33:28] 2026-01-16 05:32:52,101 | WARNING  | process 1959 can no longer be monitored (due to stat problems) - aborting
[2026-01-16 00:33:28] 2026-01-16 05:32:52,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963151531/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 00:33:28] 2026-01-16 05:32:52,188 | INFO     | number of running child processes to parent process 1959: 1
[2026-01-16 00:33:28] 2026-01-16 05:32:52,189 | INFO     | maximum number of monitored processes: 6
[2026-01-16 00:33:28] 2026-01-16 05:32:53,035 | INFO     | time since job start (6166s) is within the limit (349056.0s)
[2026-01-16 00:33:28] 2026-01-16 05:32:54,692 | INFO     | monitor loop #456: job 0:6963151531 is in state 'finished'
[2026-01-16 00:33:28] 2026-01-16 05:32:54,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:33:28] 2026-01-16 05:32:55,040 | INFO     | time since job start (6168s) is within the limit (349056.0s)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,909 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-16 00:33:28] 2026-01-16 05:32:56,912 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2026-01-16 00:33:28] 2026-01-16 05:32:56,915 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963151531/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,915 | INFO     | extracted standard info from prmon json
[2026-01-16 00:33:28] 2026-01-16 05:32:56,915 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 00:33:28] 2026-01-16 05:32:56,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 00:33:28] 2026-01-16 05:32:56,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 00:33:28] 2026-01-16 05:32:56,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 00:33:28] 2026-01-16 05:32:56,918 | INFO     | fitting pss+swap vs Time
[2026-01-16 00:33:28] 2026-01-16 05:32:56,918 | INFO     | sum of square deviations: 319447850.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | sum of deviations: 4863678107.999994
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | mean x: 1768538486.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | mean y: 2680674.079207921
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | intersect: -26923786095.109108
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | chi2: 1.5722350563671523
[2026-01-16 00:33:28] 2026-01-16 05:32:56,919 | INFO     | sum of square deviations: 274312120.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,920 | INFO     | sum of deviations: 4765521574.5
[2026-01-16 00:33:28] 2026-01-16 05:32:56,920 | INFO     | mean x: 1768538333.5
[2026-01-16 00:33:28] 2026-01-16 05:32:56,920 | INFO     | mean y: 2680348.46875
[2026-01-16 00:33:28] 2026-01-16 05:32:56,920 | INFO     | intersect: -30721472793.669216
[2026-01-16 00:33:28] 2026-01-16 05:32:56,920 | INFO     | chi2: 1.5754306833860054
[2026-01-16 00:33:28] 2026-01-16 05:32:56,921 | INFO     | current chi2=1.5754306833860054 (change=-0.2032537695881823 %)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,921 | INFO     | right removable region: 95
[2026-01-16 00:33:28] 2026-01-16 05:32:56,921 | INFO     | sum of square deviations: 274312120.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,921 | INFO     | sum of deviations: -11627954017.000002
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | mean x: 1768538638.5
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | mean y: 2735236.8958333335
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | intersect: 74970206472.8215
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | chi2: 0.08597939667316282
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | current chi2=0.08597939667316282 (change=94.5313904352299 %)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,922 | INFO     | sum of square deviations: 233641590.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | sum of deviations: -9370218296.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | mean x: 1768538791.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | mean y: 2726704.714285714
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | intersect: 70930143936.44052
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | chi2: 0.08396784139960854
[2026-01-16 00:33:28] 2026-01-16 05:32:56,923 | INFO     | current chi2=0.08396784139960854 (change=2.3395782610581537 %)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | left removable region: 20
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | sum of square deviations: 130793150.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | sum of deviations: -2673593644.0000005
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | mean x: 1768538913.0
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | mean y: 2698474.7333333334
[2026-01-16 00:33:28] 2026-01-16 05:32:56,924 | INFO     | intersect: 36154090171.95501
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | chi2: 0.04600088357418372
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | current memory leak: -20.44 B/s (using 75 data points, chi2=0.05)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | could have reported an average CPU frequency of 2150 MHz (7 samples)
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | ..............................
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | . Timing measurements:
[2026-01-16 00:33:28] 2026-01-16 05:32:56,925 | INFO     | . get job = 0 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . initial setup = 2 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . payload setup = 7 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . stage-in = 0 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . payload execution = 6133 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . stage-out = 0 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | . log creation = 0 s
[2026-01-16 00:33:28] 2026-01-16 05:32:56,926 | INFO     | ..............................
[2026-01-16 00:33:28] 2026-01-16 05:32:57,007 | INFO     | 
[2026-01-16 00:33:28] 2026-01-16 05:32:57,007 | INFO     | job summary report
[2026-01-16 00:33:28] 2026-01-16 05:32:57,007 | INFO     | --------------------------------------------------
[2026-01-16 00:33:28] 2026-01-16 05:32:57,007 | INFO     | PanDA job id: 6963151531
[2026-01-16 00:33:28] 2026-01-16 05:32:57,007 | INFO     | task id: 47898826
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | errors: (none)
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | pilot state: finished 
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | transexitcode: 0
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | exeerrorcode: 0
[2026-01-16 00:33:28] 2026-01-16 05:32:57,008 | INFO     | exeerrordiag: 
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | exitcode: 0
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | exitmsg: OK
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | cpuconsumptiontime: 68553 s
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | nevents: 400
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | neventsw: 0
[2026-01-16 00:33:28] 2026-01-16 05:32:57,009 | INFO     | pid: 1959
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | pgrp: 1959
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | corecount: 12
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | event service: False
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | sizes: {0: 2283970, 5: 2284232, 11: 2284288, 6144: 2311068, 6145: 2311067, 6146: 2320121, 6147: 2320305, 6153: 2320499}
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | --------------------------------------------------
[2026-01-16 00:33:28] 2026-01-16 05:32:57,010 | INFO     | 
[2026-01-16 00:33:28] 2026-01-16 05:32:57,011 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 00:33:28] 2026-01-16 05:32:57,034 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 00:33:28] 2026-01-16 05:32:57,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 00:33:28] 2026-01-16 05:32:57,038 | INFO     | job 6963151531 has completed (purged errors)
[2026-01-16 00:33:28] 2026-01-16 05:32:57,038 | INFO     | overall cleanup function is called
[2026-01-16 00:33:28] 2026-01-16 05:32:58,047 | INFO     | --- collectZombieJob: --- 10, [1959]
[2026-01-16 00:33:28] 2026-01-16 05:32:58,047 | INFO     | zombie collector waiting for pid 1959
[2026-01-16 00:33:28] 2026-01-16 05:32:58,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 00:33:28] 2026-01-16 05:32:58,047 | INFO     | collected zombie processes
[2026-01-16 00:33:28] 2026-01-16 05:32:58,047 | INFO     | will attempt to kill all subprocesses of pid=1959
[2026-01-16 00:33:28] 2026-01-16 05:32:58,139 | INFO     | process IDs to be killed: [1959] (in reverse order)
[2026-01-16 00:33:28] 2026-01-16 05:32:58,189 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 00:33:28] 2026-01-16 05:32:58,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 00:33:28] 2026-01-16 05:32:58,193 | INFO     | did not find any defunct processes belonging to 1959
[2026-01-16 00:33:28] 2026-01-16 05:32:58,195 | INFO     | did not find any defunct processes belonging to 1959
[2026-01-16 00:33:28] 2026-01-16 05:32:58,196 | INFO     | ready for new job
[2026-01-16 00:33:28] 2026-01-16 05:32:58,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 00:33:28] 2026-01-16 05:32:58,197 | INFO     | ***************************************
[2026-01-16 00:33:28] 2026-01-16 05:32:58,197 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 00:33:28] 2026-01-16 05:32:58,197 | INFO     | ***************************************
[2026-01-16 00:33:28] 2026-01-16 05:32:58,198 | INFO     | 
[2026-01-16 00:33:28] 2026-01-16 05:32:58,198 | INFO     | architecture information:
[2026-01-16 00:33:28] 2026-01-16 05:32:58,199 | INFO     | executing command: cat /etc/os-release
[2026-01-16 00:33:28] 2026-01-16 05:32:58,213 | INFO     | cat /etc/os-release:
[2026-01-16 00:33:28] NAME="CentOS Linux"
[2026-01-16 00:33:28] VERSION="7 (Core)"
[2026-01-16 00:33:28] ID="centos"
[2026-01-16 00:33:28] ID_LIKE="rhel fedora"
[2026-01-16 00:33:28] VERSION_ID="7"
[2026-01-16 00:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 00:33:28] ANSI_COLOR="0;31"
[2026-01-16 00:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 00:33:28] HOME_URL="https://www.centos.org/"
[2026-01-16 00:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 00:33:28] 
[2026-01-16 00:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 00:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 00:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 00:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 00:33:28] 
[2026-01-16 00:33:28] 2026-01-16 05:32:58,213 | INFO     | ***************************************
[2026-01-16 00:33:28] 2026-01-16 05:32:58,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 00:33:28] 2026-01-16 05:32:58,733 | INFO     | sufficient remaining disk space (29307699200 B)
[2026-01-16 00:33:28] 2026-01-16 05:32:58,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 00:33:28] 2026-01-16 05:32:58,734 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 00:33:28] 2026-01-16 05:32:58,734 | INFO     | update_server=False
[2026-01-16 00:33:28] 2026-01-16 05:32:58,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 00:33:28] 2026-01-16 05:32:58,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:33:28] 2026-01-16 05:32:58,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:33:28] 2026-01-16 05:32:58,735 | INFO     | aborting loop
[2026-01-16 00:33:28] 2026-01-16 05:32:59,040 | INFO     | all job control threads have been joined
[2026-01-16 00:33:28] 2026-01-16 05:32:59,653 | INFO     | all data control threads have been joined
[2026-01-16 00:33:28] 2026-01-16 05:32:59,740 | INFO     | [job] retrieve thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:32:59,741 | INFO     | [job] queue monitor thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:32:59,741 | INFO     | [job] job monitor thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,046 | INFO     | [job] control thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 00:33:28] 2026-01-16 05:33:00,182 | INFO     | [job] validate thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,231 | INFO     | all payload control threads have been joined
[2026-01-16 00:33:28] 2026-01-16 05:33:00,322 | INFO     | [payload] failed_post thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,619 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,627 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,658 | INFO     | [data] control thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:00,887 | INFO     | [payload] validate_post thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:01,091 | INFO     | [data] copytool_in thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:01,094 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:01,235 | INFO     | [payload] control thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:01,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 00:33:28] 2026-01-16 05:33:02,080 | INFO     | [data] copytool_out thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:05,430 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:08,954 | INFO     | job.realtimelogging is not enabled
[2026-01-16 00:33:28] 2026-01-16 05:33:09,959 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 00:33:28] 2026-01-16 05:33:16,915 | INFO     | [monitor] cgroup control has ended
[2026-01-16 00:33:28] 2026-01-16 05:33:18,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159044134720)>', '<ExcThread(monitor, started 140158338856704)>']
[2026-01-16 00:33:28] 2026-01-16 05:33:23,708 | INFO     | all workflow threads have been joined
[2026-01-16 00:33:28] 2026-01-16 05:33:23,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 00:33:28] 2026-01-16 05:33:23,708 | INFO     | traces error code: 0
[2026-01-16 00:33:28] 2026-01-16 05:33:23,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 00:33:28] 2026-01-16 05:33:28,227 | INFO     | PID=27084 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 00:33:28] 2026-01-16 05:33:28,227 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 00:33:28] 2026-01-16 05:33:28,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 00:33:28] 2026-01-16 05:33:28,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 00:33:28] 2026-01-16 05:33:28,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 00:33:28] 2026-01-16 05:33:28,228 | INFO     | [monitor] control thread has ended
[2026-01-16 00:33:28] 2026-01-16 05:33:28,329 [wrapper] ==== pilot stdout END ====
[2026-01-16 00:33:28] 2026-01-16 05:33:28,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 00:33:28] 2026-01-16 05:33:28,337 [wrapper] pilotpid: 27084
[2026-01-16 00:33:28] 2026-01-16 05:33:28,341 [wrapper] Pilot exit status: 0
[2026-01-16 00:33:28] 2026-01-16 05:33:28,358 [wrapper] pandaids: 6963151531
[2026-01-16 00:33:28] 2026-01-16 05:33:28,399 [wrapper] cleanup supervisor_pilot 32745 27085
[2026-01-16 00:33:28] 2026-01-16 05:33:28,403 [wrapper] Test setup, not cleaning
[2026-01-16 00:33:28] 2026-01-16 05:33:28,407 [wrapper] apfmon messages muted
[2026-01-16 00:33:28] 2026-01-16 05:33:28,411 [wrapper] ==== wrapper stdout END ====
[2026-01-16 00:33:28] 2026-01-16 05:33:28,415 [wrapper] ==== wrapper stderr END ====
[2026-01-16 00:33:28]  *** Error codes and diagnostics ***
[2026-01-16 00:33:28]     "exeErrorCode": 0,
[2026-01-16 00:33:28]     "exeErrorDiag": "",
[2026-01-16 00:33:28]     "pilotErrorCode": 0,
[2026-01-16 00:33:28]     "pilotErrorDiag": "",
[2026-01-16 00:33:28]  *** Listing of results directory ***
[2026-01-16 00:33:28] total 442552
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 11:02 queuedata.json
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-16 00:33:28] -rwx------ 1 boincer umatlas     36322 Jan  8 11:03 runpilot2-wrapper.sh
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas       100 Jan 15 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 00:33:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 22:49 run_atlas
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas       105 Jan 15 22:49 job.xml
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas 226032391 Jan 15 22:49 EVNT.47898824._001094.pool.root.1
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 22:49 start_atlas.sh
[2026-01-16 00:33:28] drwxrwx--x 2 boincer umatlas      4096 Jan 15 22:49 shared
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 22:49 input.tar.gz
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas         0 Jan 15 22:49 boinc_lockfile
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas      2519 Jan 15 22:49 pandaJob.out
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas        57 Jan 15 22:49 setup.sh.local
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas   1004075 Jan 15 22:50 agis_schedconf.cvmfs.json
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas   1516246 Jan 15 22:50 agis_ddmendpoints.agis.ALL.json
[2026-01-16 00:33:28] drwx------ 5 boincer umatlas      4096 Jan 15 22:50 pilot3
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas      5953 Jan 16 00:27 init_data.xml
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas 220631695 Jan 16 00:32 HITS.47898826._028569.pool.root.1
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas       529 Jan 16 00:32 boinc_task_state.xml
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas        95 Jan 16 00:32 pilot_heartbeat.json
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas      1046 Jan 16 00:32 memory_monitor_summary.json
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas    415604 Jan 16 00:32 log.47898826._028569.job.log.tgz.1
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas      7853 Jan 16 00:32 heartbeat.json
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas      8192 Jan 16 00:32 boinc_mmap_file
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas        27 Jan 16 00:32 wrapper_checkpoint.txt
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas       745 Jan 16 00:33 pilotlog.txt
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas    875366 Jan 16 00:33 log.47898826._028569.job.log.1
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas       357 Jan 16 00:33 output.list
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas       620 Jan 16 00:33 runtime_log
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas   1310720 Jan 16 00:33 result.tar.gz
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas      9344 Jan 16 00:33 runtime_log.err
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas       660 Jan 16 00:33 BuwNDmGf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmShfKDmCpiCUo.diag
[2026-01-16 00:33:28] -rw-r--r-- 1 boincer umatlas     21385 Jan 16 00:33 stderr.txt
[2026-01-16 00:33:28] HITS file was successfully produced:
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas 220631695 Jan 16 00:32 shared/HITS.pool.root.1
[2026-01-16 00:33:28]  *** Contents of shared directory: ***
[2026-01-16 00:33:28] total 438080
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas 226032391 Jan 15 22:49 ATLAS.root_0
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 22:49 start_atlas.sh
[2026-01-16 00:33:28] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 22:49 input.tar.gz
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas 220631695 Jan 16 00:32 HITS.pool.root.1
[2026-01-16 00:33:28] -rw------- 1 boincer umatlas   1310720 Jan 16 00:33 result.tar.gz
00:33:30 (22670): run_atlas exited; CPU time 68537.848901
00:33:30 (22670): called boinc_finish(0)

</stderr_txt>
]]>

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