Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:47 (3222213): wrapper (7.7.26015): starting
22:19:47 (3222213): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 22:19:47] Arguments: --nthreads 9
[2026-01-15 22:19:47] Threads: 9
[2026-01-15 22:19:47] Checking for CVMFS
[2026-01-15 22:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:19:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:19:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:19:47] 2.13.3.0 2295398 26412 101544 155194 2 56 35271050 37030913 0 16776704 0 16479747 99.953 1357398 44638 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 22:19:47] CVMFS is ok
[2026-01-15 22:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:19:47] Further information can be found at the LHC@home message board.
[2026-01-15 22:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:19:47] Checking for apptainer binary...
[2026-01-15 22:19:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:19:47] Running /usr/bin/apptainer --version
[2026-01-15 22:19:47] apptainer version 1.4.5-2.el9
[2026-01-15 22:19:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:19:47] c-205-36.aglt2.org
[2026-01-15 22:19:47] apptainer works
[2026-01-15 22:19:47] Set ATHENA_PROC_NUMBER=9
[2026-01-15 22:19:47] Set ATHENA_CORE_NUMBER=9
[2026-01-15 22:19:47] Starting ATLAS job with PandaID=6962321520
[2026-01-15 22:19:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 23:44:26]  *** The last 200 lines of the pilot log: ***
[2026-01-15 23:44:26]  is_tar=False
[2026-01-15 23:44:26]  lfn=log.47898826._014721.job.log.tgz.1
[2026-01-15 23:44:26]  mtime=0
[2026-01-15 23:44:26]  protocol_id=None
[2026-01-15 23:44:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 23:44:26]  replicas=None
[2026-01-15 23:44:26]  scope=mc23_13p6TeV
[2026-01-15 23:44:26]  status=None
[2026-01-15 23:44:26]  status_code=0
[2026-01-15 23:44:26]  storage_token=
[2026-01-15 23:44:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6962321520/log.47898826._014721.job.log.tgz.1
[2026-01-15 23:44:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/33/log.47898826._014721.job.log.tgz.1
[2026-01-15 23:44:26]  workdir=None
[2026-01-15 23:44:26] ]
[2026-01-15 23:44:26] 2026-01-16 04:43:49,070 | INFO     | transferring file log.47898826._014721.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6962321520/log.47898826._014721.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 23:44:26] 2026-01-16 04:43:49,070 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6962321520/log.47898826._014721.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._014721.job
[2026-01-15 23:44:26] 2026-01-16 04:43:49,079 | INFO     | adding to output.list: log.47898826._014721.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/33/log.47898826._014721.job.log.tg
[2026-01-15 23:44:26] 2026-01-16 04:43:49,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 23:44:26] 2026-01-16 04:43:49,080 | INFO     | summary of transferred files:
[2026-01-15 23:44:26] 2026-01-16 04:43:49,080 | INFO     |  -- lfn=log.47898826._014721.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 23:44:26] 2026-01-16 04:43:49,080 | INFO     | stage-out finished correctly
[2026-01-15 23:44:26] 2026-01-16 04:43:50,561 | INFO     | monitor loop #386: job 0:6962321520 is in state 'finished'
[2026-01-15 23:44:26] 2026-01-16 04:43:50,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 23:44:26] 2026-01-16 04:43:50,879 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 23:44:26] 2026-01-16 04:43:50,919 | INFO     | time since job start (5036s) is within the limit (174528.0s)
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | job 6962321520 has state=finished
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | preparing for final server update for job 6962321520 in state='finished'
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | this job has now completed (state=finished)
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | log transfer has been attempted: DONE
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | job 6962321520 has finished - writing final server update
[2026-01-15 23:44:26] 2026-01-16 04:43:51,656 | INFO     | total number of processed events: 400 (read)
[2026-01-15 23:44:26] 2026-01-16 04:43:51,657 | INFO     | executing command: lscpu
[2026-01-15 23:44:26] 2026-01-16 04:43:51,677 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 23:44:26] 2026-01-16 04:43:52,065 | INFO     | PID=3225916 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 23:44:26] 2026-01-16 04:43:53,064 | INFO     | monitor loop #387: job 0:6962321520 is in state 'finished'
[2026-01-15 23:44:26] 2026-01-16 04:43:53,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 23:44:26] 2026-01-16 04:43:53,066 | INFO     | time since job start (5039s) is within the limit (174528.0s)
[2026-01-15 23:44:26] 2026-01-16 04:43:53,773 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 23:44:26] 2026-01-16 04:43:53,777 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2743.7189687500004
[2026-01-15 23:44:26] 2026-01-16 04:43:53,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962321520/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 23:44:26] 2026-01-16 04:43:53,781 | INFO     | extracted standard info from prmon json
[2026-01-15 23:44:26] 2026-01-16 04:43:53,781 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 23:44:26] 2026-01-16 04:43:53,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 23:44:26] 2026-01-16 04:43:53,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 23:44:26] 2026-01-16 04:43:53,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 23:44:26] 2026-01-16 04:43:53,782 | INFO     | fitting pss+swap vs Time
[2026-01-15 23:44:26] 2026-01-16 04:43:53,782 | INFO     | sum of square deviations: 136095575.0
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | sum of deviations: -14720499686.999998
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | mean x: 1768536206.5
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | mean y: 2868733.1842105263
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | intersect: 191292972575.51276
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | chi2: 0.15685845468238765
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | current memory leak: -108.16 B/s (using 76 data points, chi2=0.16)
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | could have reported an average CPU frequency of 2676 MHz (6 samples)
[2026-01-15 23:44:26] 2026-01-16 04:43:53,783 | INFO     | ..............................
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . Timing measurements:
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . get job = 0 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . initial setup = 2 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . payload setup = 3 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . stage-in = 0 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . payload execution = 5014 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . stage-out = 0 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | . log creation = 0 s
[2026-01-15 23:44:26] 2026-01-16 04:43:53,784 | INFO     | ..............................
[2026-01-15 23:44:26] 2026-01-16 04:43:54,216 | INFO     | 
[2026-01-15 23:44:26] 2026-01-16 04:43:54,216 | INFO     | job summary report
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | --------------------------------------------------
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | PanDA job id: 6962321520
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | task id: 47898826
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | errors: (none)
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | pilot state: finished 
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | transexitcode: 0
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | exeerrorcode: 0
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | exeerrordiag: 
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | exitcode: 0
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | exitmsg: OK
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | cpuconsumptiontime: 41288 s
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | nevents: 400
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | neventsw: 0
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | pid: 3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | pgrp: 3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:54,217 | INFO     | corecount: 9
[2026-01-15 23:44:26] 2026-01-16 04:43:54,218 | INFO     | event service: False
[2026-01-15 23:44:26] 2026-01-16 04:43:54,218 | INFO     | sizes: {0: 2283969, 2: 2284231, 11: 2284259, 5020: 2310685, 5021: 2319683, 5023: 2319739, 5026: 2320061}
[2026-01-15 23:44:26] 2026-01-16 04:43:54,218 | INFO     | --------------------------------------------------
[2026-01-15 23:44:26] 2026-01-16 04:43:54,218 | INFO     | 
[2026-01-15 23:44:26] 2026-01-16 04:43:54,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,229 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 23:44:26] 2026-01-16 04:43:54,230 | INFO     | job 6962321520 has completed (purged errors)
[2026-01-15 23:44:26] 2026-01-16 04:43:54,230 | INFO     | overall cleanup function is called
[2026-01-15 23:44:26] 2026-01-16 04:43:55,237 | INFO     | --- collectZombieJob: --- 10, [3232423]
[2026-01-15 23:44:26] 2026-01-16 04:43:55,237 | INFO     | zombie collector waiting for pid 3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:55,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 23:44:26] 2026-01-16 04:43:55,237 | INFO     | collected zombie processes
[2026-01-15 23:44:26] 2026-01-16 04:43:55,237 | INFO     | will attempt to kill all subprocesses of pid=3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:55,335 | INFO     | process IDs to be killed: [3232423] (in reverse order)
[2026-01-15 23:44:26] 2026-01-16 04:43:55,362 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 23:44:26] 2026-01-16 04:43:55,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 23:44:26] 2026-01-16 04:43:55,364 | INFO     | did not find any defunct processes belonging to 3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:55,367 | INFO     | did not find any defunct processes belonging to 3232423
[2026-01-15 23:44:26] 2026-01-16 04:43:55,367 | INFO     | ready for new job
[2026-01-15 23:44:26] 2026-01-16 04:43:55,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 23:44:26] 2026-01-16 04:43:55,368 | INFO     | ***************************************
[2026-01-15 23:44:26] 2026-01-16 04:43:55,368 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 23:44:26] 2026-01-16 04:43:55,368 | INFO     | ***************************************
[2026-01-15 23:44:26] 2026-01-16 04:43:55,368 | INFO     | 
[2026-01-15 23:44:26] 2026-01-16 04:43:55,369 | INFO     | architecture information:
[2026-01-15 23:44:26] 2026-01-16 04:43:55,369 | INFO     | executing command: cat /etc/os-release
[2026-01-15 23:44:26] 2026-01-16 04:43:55,375 | INFO     | cat /etc/os-release:
[2026-01-15 23:44:26] NAME="CentOS Linux"
[2026-01-15 23:44:26] VERSION="7 (Core)"
[2026-01-15 23:44:26] ID="centos"
[2026-01-15 23:44:26] ID_LIKE="rhel fedora"
[2026-01-15 23:44:26] VERSION_ID="7"
[2026-01-15 23:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 23:44:26] ANSI_COLOR="0;31"
[2026-01-15 23:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 23:44:26] HOME_URL="https://www.centos.org/"
[2026-01-15 23:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 23:44:26] 
[2026-01-15 23:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 23:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 23:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 23:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 23:44:26] 
[2026-01-15 23:44:26] 2026-01-16 04:43:55,376 | INFO     | ***************************************
[2026-01-15 23:44:26] 2026-01-16 04:43:55,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 23:44:26] 2026-01-16 04:43:55,885 | INFO     | sufficient remaining disk space (42825940992 B)
[2026-01-15 23:44:26] 2026-01-16 04:43:55,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 23:44:26] 2026-01-16 04:43:55,885 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 23:44:26] 2026-01-16 04:43:55,885 | INFO     | update_server=False
[2026-01-15 23:44:26] 2026-01-16 04:43:55,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 23:44:26] 2026-01-16 04:43:56,086 | INFO     | all data control threads have been joined
[2026-01-15 23:44:26] 2026-01-16 04:43:56,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 23:44:26] 2026-01-16 04:43:56,572 | INFO     | aborting loop
[2026-01-15 23:44:26] 2026-01-16 04:43:56,891 | INFO     | [job] retrieve thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:56,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 23:44:26] 2026-01-16 04:43:57,065 | INFO     | [payload] failed_post thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:57,091 | INFO     | [data] control thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:57,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 23:44:26] 2026-01-16 04:43:57,188 | INFO     | all payload control threads have been joined
[2026-01-15 23:44:26] 2026-01-16 04:43:57,215 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:57,545 | INFO     | all job control threads have been joined
[2026-01-15 23:44:26] 2026-01-16 04:43:57,577 | INFO     | [job] job monitor thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:57,621 | INFO     | [payload] validate_post thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,147 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,193 | INFO     | [payload] control thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,211 | INFO     | [job] validate thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,257 | INFO     | [data] copytool_in thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,374 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,550 | INFO     | [job] control thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:58,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 23:44:26] 2026-01-16 04:43:59,146 | INFO     | [data] copytool_out thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:43:59,853 | INFO     | [job] queue monitor thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:44:00,939 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:44:01,249 | INFO     | [monitor] cgroup control has ended
[2026-01-15 23:44:26] 2026-01-16 04:44:06,622 | INFO     | job.realtimelogging is not enabled
[2026-01-15 23:44:26] 2026-01-16 04:44:07,627 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 23:44:26] 2026-01-16 04:44:08,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730095511360)>', '<ExcThread(monitor, started 139729311889152)>']
[2026-01-15 23:44:26] 2026-01-16 04:44:13,969 | INFO     | all workflow threads have been joined
[2026-01-15 23:44:26] 2026-01-16 04:44:13,969 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 23:44:26] 2026-01-16 04:44:13,969 | INFO     | traces error code: 0
[2026-01-15 23:44:26] 2026-01-16 04:44:13,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | INFO     | PID=3225916 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 23:44:26] 2026-01-16 04:44:26,266 | INFO     | [monitor] control thread has ended
[2026-01-15 23:44:26] 2026-01-16 04:44:26,329 [wrapper] ==== pilot stdout END ====
[2026-01-15 23:44:26] 2026-01-16 04:44:26,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 23:44:26] 2026-01-16 04:44:26,332 [wrapper] pilotpid: 3225916
[2026-01-15 23:44:26] 2026-01-16 04:44:26,334 [wrapper] Pilot exit status: 0
[2026-01-15 23:44:26] 2026-01-16 04:44:26,340 [wrapper] pandaids: 6962321520
[2026-01-15 23:44:26] 2026-01-16 04:44:26,360 [wrapper] cleanup supervisor_pilot 3283740 3225917
[2026-01-15 23:44:26] 2026-01-16 04:44:26,362 [wrapper] Test setup, not cleaning
[2026-01-15 23:44:26] 2026-01-16 04:44:26,363 [wrapper] apfmon messages muted
[2026-01-15 23:44:26] 2026-01-16 04:44:26,365 [wrapper] ==== wrapper stdout END ====
[2026-01-15 23:44:26] 2026-01-16 04:44:26,366 [wrapper] ==== wrapper stderr END ====
[2026-01-15 23:44:26]  *** Error codes and diagnostics ***
[2026-01-15 23:44:26]     "exeErrorCode": 0,
[2026-01-15 23:44:26]     "exeErrorDiag": "",
[2026-01-15 23:44:26]     "pilotErrorCode": 0,
[2026-01-15 23:44:26]     "pilotErrorDiag": "",
[2026-01-15 23:44:26]  *** Listing of results directory ***
[2026-01-15 23:44:26] total 439024
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-15 23:44:26] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas       100 Jan 15 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 23:44:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 22:19 run_atlas
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas       105 Jan 15 22:19 job.xml
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas 225674921 Jan 15 22:19 EVNT.47898824._000688.pool.root.1
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 22:19 start_atlas.sh
[2026-01-15 23:44:26] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 22:19 shared
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 22:19 input.tar.gz
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas         0 Jan 15 22:19 boinc_lockfile
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas      2519 Jan 15 22:19 pandaJob.out
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas   1004075 Jan 15 22:19 agis_schedconf.cvmfs.json
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas   1516246 Jan 15 22:19 agis_ddmendpoints.agis.ALL.json
[2026-01-15 23:44:26] drwx------. 5 boincer umatlas      4096 Jan 15 22:19 pilot3
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas      6529 Jan 15 23:38 init_data.xml
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas 217814251 Jan 15 23:43 HITS.47898826._014721.pool.root.1
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas       529 Jan 15 23:43 boinc_task_state.xml
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas        95 Jan 15 23:43 pilot_heartbeat.json
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas      1040 Jan 15 23:43 memory_monitor_summary.json
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas    337266 Jan 15 23:43 log.47898826._014721.job.log.tgz.1
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas      7812 Jan 15 23:43 heartbeat.json
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 23:43 boinc_mmap_file
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas        27 Jan 15 23:43 wrapper_checkpoint.txt
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas       747 Jan 15 23:44 pilotlog.txt
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas    734213 Jan 15 23:44 log.47898826._014721.job.log.1
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas       357 Jan 15 23:44 output.list
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas       620 Jan 15 23:44 runtime_log
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas   1095680 Jan 15 23:44 result.tar.gz
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas      8817 Jan 15 23:44 runtime_log.err
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas       648 Jan 15 23:44 9RhMDmQxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmB3dKDm8t1dxn.diag
[2026-01-15 23:44:26] -rw-r--r--. 1 boincer umatlas     21712 Jan 15 23:44 stderr.txt
[2026-01-15 23:44:26] HITS file was successfully produced:
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas 217814251 Jan 15 23:43 shared/HITS.pool.root.1
[2026-01-15 23:44:26]  *** Contents of shared directory: ***
[2026-01-15 23:44:26] total 434768
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas 225674921 Jan 15 22:19 ATLAS.root_0
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 22:19 start_atlas.sh
[2026-01-15 23:44:26] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 22:19 input.tar.gz
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas 217814251 Jan 15 23:43 HITS.pool.root.1
[2026-01-15 23:44:26] -rw-------. 1 boincer umatlas   1095680 Jan 15 23:44 result.tar.gz
23:44:28 (3222213): run_atlas exited; CPU time 41337.972792
23:44:28 (3222213): called boinc_finish(0)

</stderr_txt>
]]>

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