Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:11:37 (3780814): wrapper (7.7.26015): starting
04:11:37 (3780814): wrapper: running run_atlas (--nthreads 2)
[2026-01-16 04:11:37] Arguments: --nthreads 2
[2026-01-16 04:11:37] Threads: 2
[2026-01-16 04:11:37] Checking for CVMFS
[2026-01-16 04:11:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 04:11:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 04:11:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 04:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 04:11:52] 2.11.2.0 3781024 0 23848 155193 3 1 2059246 4096001 0 130560 0 0 0.000 1336 1835 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-16 04:11:52] CVMFS is ok
[2026-01-16 04:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 04:11:52] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-16 04:11:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-16 04:11:52] Further information can be found at the LHC@home message board.
[2026-01-16 04:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 04:11:52] Checking for apptainer binary...
[2026-01-16 04:11:52] apptainer is not installed, using version from CVMFS
[2026-01-16 04:11:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 04:11:52] Enceladus
[2026-01-16 04:11:52] apptainer works
[2026-01-16 04:11:52] Set ATHENA_PROC_NUMBER=2
[2026-01-16 04:11:52] Set ATHENA_CORE_NUMBER=2
[2026-01-16 04:11:52] Starting ATLAS job with PandaID=6963156178
[2026-01-16 04:11:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 07:23:08]  *** The last 200 lines of the pilot log: ***
[2026-01-16 07:23:08] 2026-01-16 06:22:34,821 | INFO     | time since job start (11399s) is within the limit (349056.0s)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,473 | INFO     | monitor loop #862: job 0:6963156178 is in state 'finished'
[2026-01-16 07:23:08] 2026-01-16 06:22:35,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,506 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 07:23:08] 2026-01-16 06:22:35,528 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 2199.818583333333
[2026-01-16 07:23:08] 2026-01-16 06:22:35,531 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6963156178/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,531 | INFO     | extracted standard info from prmon json
[2026-01-16 07:23:08] 2026-01-16 06:22:35,532 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 07:23:08] 2026-01-16 06:22:35,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 07:23:08] 2026-01-16 06:22:35,532 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 07:23:08] 2026-01-16 06:22:35,532 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 07:23:08] 2026-01-16 06:22:35,534 | INFO     | fitting pss+swap vs Time
[2026-01-16 07:23:08] 2026-01-16 06:22:35,534 | INFO     | sum of square deviations: 2027639878.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | sum of deviations: 3144570556.999998
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | mean x: 1768538851.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | mean y: 2249164.251336898
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | intersect: -2740493893.8752832
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | chi2: 1.6970187105642898
[2026-01-16 07:23:08] 2026-01-16 06:22:35,535 | INFO     | sum of square deviations: 1869302025.5
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | sum of deviations: 13107623025.999998
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | mean x: 1768538698.5
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | mean y: 2258544.4065934066
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | intersect: -12398807870.010914
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | chi2: 1.045858255912873
[2026-01-16 07:23:08] 2026-01-16 06:22:35,536 | INFO     | current chi2=1.045858255912873 (change=38.37084709778444 %)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,537 | INFO     | sum of square deviations: 1719429448.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,537 | INFO     | sum of deviations: 12535076538.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,537 | INFO     | mean x: 1768538546.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,537 | INFO     | mean y: 2257961.661016949
[2026-01-16 07:23:08] 2026-01-16 06:22:35,537 | INFO     | intersect: -12890836349.535889
[2026-01-16 07:23:08] 2026-01-16 06:22:35,538 | INFO     | chi2: 1.04645199190696
[2026-01-16 07:23:08] 2026-01-16 06:22:35,538 | INFO     | current chi2=1.04645199190696 (change=-0.05677021630131059 %)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,538 | INFO     | right removable region: 176
[2026-01-16 07:23:08] 2026-01-16 06:22:35,538 | INFO     | sum of square deviations: 1869302025.5
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | sum of deviations: -8408473477.499999
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | mean x: 1768539003.5
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | mean y: 2260035.587912088
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | intersect: 7957482413.778198
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | chi2: 0.6688590224567547
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | current chi2=0.6688590224567547 (change=60.586231707819714 %)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,539 | INFO     | sum of square deviations: 1719429448.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | sum of deviations: -8829264745.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | mean x: 1768539156.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | mean y: 2260462.033898305
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | intersect: 9083703401.36807
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | chi2: 0.668496822919647
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | current chi2=0.668496822919647 (change=0.05415185038206123 %)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | left removable region: 20
[2026-01-16 07:23:08] 2026-01-16 06:22:35,540 | INFO     | sum of square deviations: 1177156955.0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | sum of deviations: 435031015.99999994
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | mean x: 1768539125.5
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | mean y: 2270673.2564102565
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | intersect: -651311985.6525
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | chi2: 0.0017741805756178552
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | current memory leak: 0.37 B/s (using 156 data points, chi2=0.00)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | could have reported an average CPU frequency of 2383 MHz (10 samples)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,541 | INFO     | ..............................
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . Timing measurements:
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . get job = 0 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . initial setup = 1 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . payload setup = 4 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . stage-in = 0 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . payload execution = 11351 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . stage-out = 0 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | . log creation = 0 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,542 | INFO     | ..............................
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | 
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | job summary report
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | --------------------------------------------------
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | PanDA job id: 6963156178
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | task id: 47898826
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | errors: (none)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,579 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | pilot state: finished 
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | transexitcode: 0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | exeerrorcode: 0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | exeerrordiag: 
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | exitcode: 0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | exitmsg: OK
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | cpuconsumptiontime: 22503 s
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | nevents: 400
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | neventsw: 0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | pid: 3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | pgrp: 3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | corecount: 2
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | event service: False
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | sizes: {0: 2283749, 1: 2284004, 4: 2284266, 11: 2284294, 11359: 2313764, 11360: 2322776, 11362: 2322960, 11385: 2323154}
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | --------------------------------------------------
[2026-01-16 07:23:08] 2026-01-16 06:22:35,580 | INFO     | 
[2026-01-16 07:23:08] 2026-01-16 06:22:35,581 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-16 07:23:08] 2026-01-16 06:22:35,596 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,596 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,596 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,597 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,598 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 07:23:08] 2026-01-16 06:22:35,598 | INFO     | job 6963156178 has completed (purged errors)
[2026-01-16 07:23:08] 2026-01-16 06:22:35,598 | INFO     | overall cleanup function is called
[2026-01-16 07:23:08] 2026-01-16 06:22:36,605 | INFO     | --- collectZombieJob: --- 10, [3792027]
[2026-01-16 07:23:08] 2026-01-16 06:22:36,606 | INFO     | zombie collector waiting for pid 3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:36,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 07:23:08] 2026-01-16 06:22:36,606 | INFO     | collected zombie processes
[2026-01-16 07:23:08] 2026-01-16 06:22:36,606 | INFO     | will attempt to kill all subprocesses of pid=3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:36,661 | INFO     | process IDs to be killed: [3792027] (in reverse order)
[2026-01-16 07:23:08] 2026-01-16 06:22:36,701 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 07:23:08] 2026-01-16 06:22:36,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 07:23:08] 2026-01-16 06:22:36,704 | INFO     | did not find any defunct processes belonging to 3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:36,707 | INFO     | did not find any defunct processes belonging to 3792027
[2026-01-16 07:23:08] 2026-01-16 06:22:36,708 | INFO     | ready for new job
[2026-01-16 07:23:08] 2026-01-16 06:22:36,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 07:23:08] 2026-01-16 06:22:36,709 | INFO     | ***************************************
[2026-01-16 07:23:08] 2026-01-16 06:22:36,709 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 07:23:08] 2026-01-16 06:22:36,709 | INFO     | ***************************************
[2026-01-16 07:23:08] 2026-01-16 06:22:36,709 | INFO     | 
[2026-01-16 07:23:08] 2026-01-16 06:22:36,730 | INFO     | architecture information:
[2026-01-16 07:23:08] 2026-01-16 06:22:36,730 | INFO     | executing command: cat /etc/os-release
[2026-01-16 07:23:08] 2026-01-16 06:22:36,743 | INFO     | cat /etc/os-release:
[2026-01-16 07:23:08] NAME="CentOS Linux"
[2026-01-16 07:23:08] VERSION="7 (Core)"
[2026-01-16 07:23:08] ID="centos"
[2026-01-16 07:23:08] ID_LIKE="rhel fedora"
[2026-01-16 07:23:08] VERSION_ID="7"
[2026-01-16 07:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 07:23:08] ANSI_COLOR="0;31"
[2026-01-16 07:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 07:23:08] HOME_URL="https://www.centos.org/"
[2026-01-16 07:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 07:23:08] 
[2026-01-16 07:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 07:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 07:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 07:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 07:23:08] 
[2026-01-16 07:23:08] 2026-01-16 06:22:36,744 | INFO     | ***************************************
[2026-01-16 07:23:08] 2026-01-16 06:22:37,246 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-16 07:23:08] 2026-01-16 06:22:37,262 | INFO     | sufficient remaining disk space (271205793792 B)
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | INFO     | update_server=False
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 07:23:08] 2026-01-16 06:22:37,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 07:23:08] 2026-01-16 06:22:37,264 | INFO     | aborting loop
[2026-01-16 07:23:08] 2026-01-16 06:22:37,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 07:23:08] 2026-01-16 06:22:37,817 | INFO     | all data control threads have been joined
[2026-01-16 07:23:08] 2026-01-16 06:22:38,269 | INFO     | [job] retrieve thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:38,269 | INFO     | [job] queue monitor thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:38,270 | INFO     | [job] job monitor thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:38,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 07:23:08] 2026-01-16 06:22:38,426 | INFO     | all payload control threads have been joined
[2026-01-16 07:23:08] 2026-01-16 06:22:38,450 | INFO     | [payload] failed_post thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:38,585 | INFO     | all job control threads have been joined
[2026-01-16 07:23:08] 2026-01-16 06:22:38,823 | INFO     | [data] control thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,009 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,117 | INFO     | [job] validate thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,257 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,344 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,358 | INFO     | [payload] validate_post thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,432 | INFO     | [payload] control thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,590 | INFO     | [job] control thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:39,689 | INFO     | [data] copytool_in thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:40,424 | INFO     | [data] copytool_out thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:41,270 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 07:23:08] 2026-01-16 06:22:50,207 | INFO     | [monitor] cgroup control has ended
[2026-01-16 07:23:08] 2026-01-16 06:22:51,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483236251456)>', '<ExcThread(monitor, started 140482667603712)>']
[2026-01-16 07:23:08] 2026-01-16 06:22:56,351 | INFO     | all workflow threads have been joined
[2026-01-16 07:23:08] 2026-01-16 06:22:56,351 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 07:23:08] 2026-01-16 06:22:56,360 | INFO     | traces error code: 0
[2026-01-16 07:23:08] 2026-01-16 06:22:56,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 07:23:08] 2026-01-16 06:23:07,964 | INFO     | PID=3785303 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 07:23:08] 2026-01-16 06:23:07,965 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 07:23:08] 2026-01-16 06:23:07,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 07:23:08] 2026-01-16 06:23:07,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 07:23:08] 2026-01-16 06:23:07,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 07:23:08] 2026-01-16 06:23:07,965 | INFO     | [monitor] control thread has ended
[2026-01-16 07:23:08] 2026-01-16 06:23:08,028 [wrapper] ==== pilot stdout END ====
[2026-01-16 07:23:08] 2026-01-16 06:23:08,031 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 07:23:08] 2026-01-16 06:23:08,033 [wrapper] pilotpid: 3785303
[2026-01-16 07:23:08] 2026-01-16 06:23:08,036 [wrapper] Pilot exit status: 0
[2026-01-16 07:23:08] 2026-01-16 06:23:08,046 [wrapper] pandaids: 6963156178
[2026-01-16 07:23:08] 2026-01-16 06:23:08,073 [wrapper] cleanup supervisor_pilot 3811976 3785304
[2026-01-16 07:23:08] 2026-01-16 06:23:08,075 [wrapper] Test setup, not cleaning
[2026-01-16 07:23:08] 2026-01-16 06:23:08,077 [wrapper] apfmon messages muted
[2026-01-16 07:23:08] 2026-01-16 06:23:08,079 [wrapper] ==== wrapper stdout END ====
[2026-01-16 07:23:08] 2026-01-16 06:23:08,081 [wrapper] ==== wrapper stderr END ====
[2026-01-16 07:23:08]  *** Error codes and diagnostics ***
[2026-01-16 07:23:08]     "exeErrorCode": 0,
[2026-01-16 07:23:08]     "exeErrorDiag": "",
[2026-01-16 07:23:08]     "pilotErrorCode": 0,
[2026-01-16 07:23:08]     "pilotErrorDiag": "",
[2026-01-16 07:23:08]  *** Listing of results directory ***
[2026-01-16 07:23:08] total 437408
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-16 07:23:08] -rwx------ 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc       100 Jan 16 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 07:23:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 04:11 run_atlas
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc       105 Jan 16 04:11 job.xml
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc 224085119 Jan 16 04:11 EVNT.47898824._000894.pool.root.1
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc     15847 Jan 16 04:11 start_atlas.sh
[2026-01-16 07:23:08] drwxrwx--x 2 boinc boinc      4096 Jan 16 04:11 shared
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc    592395 Jan 16 04:11 input.tar.gz
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc      8988 Jan 16 04:11 init_data.xml
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc         0 Jan 16 04:11 boinc_setup_complete
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc         0 Jan 16 04:11 boinc_lockfile
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc      2519 Jan 16 04:11 pandaJob.out
[2026-01-16 07:23:08] -rw------- 1 boinc boinc   1004083 Jan 16 04:12 agis_schedconf.cvmfs.json
[2026-01-16 07:23:08] drwx------ 5 boinc boinc      4096 Jan 16 04:12 pilot3
[2026-01-16 07:23:08] -rw------- 1 boinc boinc 216015025 Jan 16 07:21 HITS.47898826._031355.pool.root.1
[2026-01-16 07:23:08] -rw------- 1 boinc boinc      1017 Jan 16 07:22 memory_monitor_summary.json
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc       530 Jan 16 07:22 boinc_task_state.xml
[2026-01-16 07:23:08] -rw------- 1 boinc boinc   1516246 Jan 16 07:22 agis_ddmendpoints.agis.ALL.json
[2026-01-16 07:23:08] -rw------- 1 boinc boinc    322001 Jan 16 07:22 log.47898826._031355.job.log.tgz.1
[2026-01-16 07:23:08] -rw------- 1 boinc boinc      7739 Jan 16 07:22 heartbeat.json
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc      8192 Jan 16 07:23 boinc_mmap_file
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc        27 Jan 16 07:23 wrapper_checkpoint.txt
[2026-01-16 07:23:08] -rw------- 1 boinc boinc       747 Jan 16 07:23 pilotlog.txt
[2026-01-16 07:23:08] -rw------- 1 boinc boinc        95 Jan 16 07:23 pilot_heartbeat.json
[2026-01-16 07:23:08] -rw------- 1 boinc boinc   1609988 Jan 16 07:23 log.47898826._031355.job.log.1
[2026-01-16 07:23:08] -rw------- 1 boinc boinc       357 Jan 16 07:23 output.list
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc       620 Jan 16 07:23 runtime_log
[2026-01-16 07:23:08] -rw------- 1 boinc boinc   1955840 Jan 16 07:23 result.tar.gz
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc      8888 Jan 16 07:23 runtime_log.err
[2026-01-16 07:23:08] -rw------- 1 boinc boinc       647 Jan 16 07:23 5UtNDmjZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBLlKDmbibDRn.diag
[2026-01-16 07:23:08] -rw-r--r-- 1 boinc boinc     21220 Jan 16 07:23 stderr.txt
[2026-01-16 07:23:08] HITS file was successfully produced:
[2026-01-16 07:23:08] -rw------- 1 boinc boinc 216015025 Jan 16 07:21 shared/HITS.pool.root.1
[2026-01-16 07:23:08]  *** Contents of shared directory: ***
[2026-01-16 07:23:08] total 432308
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc 224085119 Jan 16 04:11 ATLAS.root_0
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc     15847 Jan 16 04:11 start_atlas.sh
[2026-01-16 07:23:08] -rw-r--r-- 2 boinc boinc    592395 Jan 16 04:11 input.tar.gz
[2026-01-16 07:23:08] -rw------- 1 boinc boinc 216015025 Jan 16 07:21 HITS.pool.root.1
[2026-01-16 07:23:08] -rw------- 1 boinc boinc   1955840 Jan 16 07:23 result.tar.gz
07:23:10 (3780814): run_atlas exited; CPU time 22531.191628
07:23:10 (3780814): called boinc_finish(0)

</stderr_txt>
]]>

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