Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:05:02 (66115): wrapper (7.7.26015): starting
22:05:02 (66115): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 22:05:02] Arguments: --nthreads 12
[2026-01-15 22:05:02] Threads: 12
[2026-01-15 22:05:02] Checking for CVMFS
[2026-01-15 22:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:05:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:05:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:05:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:05:04] 2.13.3.0 6596 81220 329180 155193 3 13 25901637 32935937 18938 16776704 0 374350877 99.684 294333041 33222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 22:05:04] CVMFS is ok
[2026-01-15 22:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:05:04] Further information can be found at the LHC@home message board.
[2026-01-15 22:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:05:04] Checking for apptainer binary...
[2026-01-15 22:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:05:04] Running /usr/bin/apptainer --version
[2026-01-15 22:05:04] apptainer version 1.4.5-2.el9
[2026-01-15 22:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:05:05] c-6-7.aglt2.org
[2026-01-15 22:05:05] apptainer works
[2026-01-15 22:05:05] Set ATHENA_PROC_NUMBER=12
[2026-01-15 22:05:05] Set ATHENA_CORE_NUMBER=12
[2026-01-15 22:05:05] Starting ATLAS job with PandaID=6962322606
[2026-01-15 22:05:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 06:11:03]  *** The last 200 lines of the pilot log: ***
[2026-01-16 06:11:03] 2026-01-16 11:10:25,071 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 06:11:03] 2026-01-16 11:10:25,120 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0992249999995
[2026-01-16 06:11:03] 2026-01-16 11:10:25,232 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962322606/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,233 | INFO     | extracted standard info from prmon json
[2026-01-16 06:11:03] 2026-01-16 11:10:25,233 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 06:11:03] 2026-01-16 11:10:25,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 06:11:03] 2026-01-16 11:10:25,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 06:11:03] 2026-01-16 11:10:25,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 06:11:03] 2026-01-16 11:10:25,281 | INFO     | fitting pss+swap vs Time
[2026-01-16 06:11:03] 2026-01-16 11:10:25,282 | INFO     | sum of square deviations: 33229754674.105404
[2026-01-16 06:11:03] 2026-01-16 11:10:25,295 | INFO     | sum of deviations: 88164189523.84225
[2026-01-16 06:11:03] 2026-01-16 11:10:25,296 | INFO     | mean x: 1768547335.2631578
[2026-01-16 06:11:03] 2026-01-16 11:10:25,296 | INFO     | mean y: 2692495.265263158
[2026-01-16 06:11:03] 2026-01-16 11:10:25,296 | INFO     | intersect: -4689564308.229326
[2026-01-16 06:11:03] 2026-01-16 11:10:25,304 | INFO     | chi2: 3.2396881705244667
[2026-01-16 06:11:03] 2026-01-16 11:10:25,305 | INFO     | sum of square deviations: 32191451068.640335
[2026-01-16 06:11:03] 2026-01-16 11:10:25,353 | INFO     | sum of deviations: 121617065567.51479
[2026-01-16 06:11:03] 2026-01-16 11:10:25,353 | INFO     | mean x: 1768547182.7723405
[2026-01-16 06:11:03] 2026-01-16 11:10:25,353 | INFO     | mean y: 2697364.331914894
[2026-01-16 06:11:03] 2026-01-16 11:10:25,354 | INFO     | intersect: -6678751018.589701
[2026-01-16 06:11:03] 2026-01-16 11:10:25,354 | INFO     | chi2: 2.4294386108399193
[2026-01-16 06:11:03] 2026-01-16 11:10:25,355 | INFO     | current chi2=2.4294386108399193 (change=25.010109524009454 %)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,355 | INFO     | sum of square deviations: 31175008216.09465
[2026-01-16 06:11:03] 2026-01-16 11:10:25,366 | INFO     | sum of deviations: 119431066832.8946
[2026-01-16 06:11:03] 2026-01-16 11:10:25,377 | INFO     | mean x: 1768547030.2817204
[2026-01-16 06:11:03] 2026-01-16 11:10:25,377 | INFO     | mean y: 2697036.4817204303
[2026-01-16 06:11:03] 2026-01-16 11:10:25,377 | INFO     | intersect: -6772584532.22201
[2026-01-16 06:11:03] 2026-01-16 11:10:25,378 | INFO     | chi2: 2.4299174510721104
[2026-01-16 06:11:03] 2026-01-16 11:10:25,378 | INFO     | current chi2=2.4299174510721104 (change=-0.019709912819142535 %)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,378 | INFO     | right removable region: 464
[2026-01-16 06:11:03] 2026-01-16 11:10:25,379 | INFO     | sum of square deviations: 32191142893.542526
[2026-01-16 06:11:03] 2026-01-16 11:10:25,391 | INFO     | sum of deviations: -31239541300.02128
[2026-01-16 06:11:03] 2026-01-16 11:10:25,400 | INFO     | mean x: 1768547487.7765958
[2026-01-16 06:11:03] 2026-01-16 11:10:25,400 | INFO     | mean y: 2709982.361702128
[2026-01-16 06:11:03] 2026-01-16 11:10:25,400 | INFO     | intersect: 1718977480.7899296
[2026-01-16 06:11:03] 2026-01-16 11:10:25,401 | INFO     | chi2: 0.9520842686527461
[2026-01-16 06:11:03] 2026-01-16 11:10:25,401 | INFO     | current chi2=0.9520842686527461 (change=70.61185464344814 %)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,402 | INFO     | sum of square deviations: 31174391987.806526
[2026-01-16 06:11:03] 2026-01-16 11:10:25,412 | INFO     | sum of deviations: -53341936363.129
[2026-01-16 06:11:03] 2026-01-16 11:10:25,412 | INFO     | mean x: 1768547640.2903225
[2026-01-16 06:11:03] 2026-01-16 11:10:25,412 | INFO     | mean y: 2713298.860215054
[2026-01-16 06:11:03] 2026-01-16 11:10:25,412 | INFO     | intersect: 3028843069.7448363
[2026-01-16 06:11:03] 2026-01-16 11:10:25,413 | INFO     | chi2: 0.8633597913150859
[2026-01-16 06:11:03] 2026-01-16 11:10:25,413 | INFO     | current chi2=0.8633597913150859 (change=9.31897314753561 %)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,414 | INFO     | left removable region: 20
[2026-01-16 06:11:03] 2026-01-16 11:10:25,414 | INFO     | sum of square deviations: 27138481237.585476
[2026-01-16 06:11:03] 2026-01-16 11:10:25,448 | INFO     | sum of deviations: -22219595694.4865
[2026-01-16 06:11:03] 2026-01-16 11:10:25,448 | INFO     | mean x: 1768547609.81982
[2026-01-16 06:11:03] 2026-01-16 11:10:25,448 | INFO     | mean y: 2718759.918918919
[2026-01-16 06:11:03] 2026-01-16 11:10:25,448 | INFO     | intersect: 1450714781.2372835
[2026-01-16 06:11:03] 2026-01-16 11:10:25,449 | INFO     | chi2: 0.03555972704066986
[2026-01-16 06:11:03] 2026-01-16 11:10:25,449 | INFO     | current memory leak: -0.82 B/s (using 444 data points, chi2=0.04)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,450 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,450 | INFO     | ..............................
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . Timing measurements:
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . get job = 0 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . initial setup = 5 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . payload setup = 29 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . stage-in = 0 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . payload execution = 28947 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,467 | INFO     | . stage-out = 4 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,468 | INFO     | . log creation = 0 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,468 | INFO     | ..............................
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | job summary report
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | --------------------------------------------------
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | PanDA job id: 6962322606
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | task id: 47898826
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | errors: (none)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,814 | INFO     | pilot state: finished 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | transexitcode: 0
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | exeerrorcode: 0
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | exeerrordiag: 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | exitcode: 0
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | exitmsg: OK
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | cpuconsumptiontime: 72075 s
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | nevents: 400
[2026-01-16 06:11:03] 2026-01-16 11:10:25,815 | INFO     | neventsw: 0
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | pid: 88656
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | pgrp: 88656
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | corecount: 12
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | event service: False
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 24: 2284227, 25: 2284315, 35: 2284343, 28980: 2321426, 28985: 2330424, 28988: 2330508, 29007: 2330702}
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | --------------------------------------------------
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,816 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 06:11:03] 2026-01-16 11:10:25,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,916 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 06:11:03] 2026-01-16 11:10:25,916 | INFO     | job 6962322606 has completed (purged errors)
[2026-01-16 06:11:03] 2026-01-16 11:10:25,916 | INFO     | overall cleanup function is called
[2026-01-16 06:11:03] 2026-01-16 11:10:25,941 | INFO     | PID=72564 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 06:11:03] 2026-01-16 11:10:25,941 | INFO     | .. there are 25 such processes running
[2026-01-16 06:11:03] 2026-01-16 11:10:26,950 | INFO     | --- collectZombieJob: --- 10, [88656]
[2026-01-16 06:11:03] 2026-01-16 11:10:26,950 | INFO     | zombie collector waiting for pid 88656
[2026-01-16 06:11:03] 2026-01-16 11:10:26,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 06:11:03] 2026-01-16 11:10:26,950 | INFO     | collected zombie processes
[2026-01-16 06:11:03] 2026-01-16 11:10:26,950 | INFO     | will attempt to kill all subprocesses of pid=88656
[2026-01-16 06:11:03] 2026-01-16 11:10:27,369 | INFO     | process IDs to be killed: [88656] (in reverse order)
[2026-01-16 06:11:03] 2026-01-16 11:10:27,484 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 06:11:03] 2026-01-16 11:10:27,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 06:11:03] 2026-01-16 11:10:27,521 | INFO     | did not find any defunct processes belonging to 88656
[2026-01-16 06:11:03] 2026-01-16 11:10:27,542 | INFO     | did not find any defunct processes belonging to 88656
[2026-01-16 06:11:03] 2026-01-16 11:10:27,542 | INFO     | ready for new job
[2026-01-16 06:11:03] 2026-01-16 11:10:27,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 06:11:03] 2026-01-16 11:10:27,545 | INFO     | ***************************************
[2026-01-16 06:11:03] 2026-01-16 11:10:27,545 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 06:11:03] 2026-01-16 11:10:27,546 | INFO     | ***************************************
[2026-01-16 06:11:03] 2026-01-16 11:10:27,546 | INFO     | 
[2026-01-16 06:11:03] 2026-01-16 11:10:27,547 | INFO     | architecture information:
[2026-01-16 06:11:03] 2026-01-16 11:10:27,547 | INFO     | executing command: cat /etc/os-release
[2026-01-16 06:11:03] 2026-01-16 11:10:27,616 | INFO     | cat /etc/os-release:
[2026-01-16 06:11:03] NAME="CentOS Linux"
[2026-01-16 06:11:03] VERSION="7 (Core)"
[2026-01-16 06:11:03] ID="centos"
[2026-01-16 06:11:03] ID_LIKE="rhel fedora"
[2026-01-16 06:11:03] VERSION_ID="7"
[2026-01-16 06:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 06:11:03] ANSI_COLOR="0;31"
[2026-01-16 06:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 06:11:03] HOME_URL="https://www.centos.org/"
[2026-01-16 06:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 06:11:03] 
[2026-01-16 06:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 06:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 06:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 06:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 06:11:03] 
[2026-01-16 06:11:03] 2026-01-16 11:10:27,616 | INFO     | ***************************************
[2026-01-16 06:11:03] 2026-01-16 11:10:28,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 06:11:03] 2026-01-16 11:10:28,154 | INFO     | sufficient remaining disk space (76477890560 B)
[2026-01-16 06:11:03] 2026-01-16 11:10:28,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 06:11:03] 2026-01-16 11:10:28,155 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 06:11:03] 2026-01-16 11:10:28,155 | INFO     | update_server=False
[2026-01-16 06:11:03] 2026-01-16 11:10:28,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 06:11:03] 2026-01-16 11:10:28,172 | INFO     | all data control threads have been joined
[2026-01-16 06:11:03] 2026-01-16 11:10:28,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 06:11:03] 2026-01-16 11:10:28,524 | INFO     | aborting loop
[2026-01-16 06:11:03] 2026-01-16 11:10:28,560 | INFO     | all payload control threads have been joined
[2026-01-16 06:11:03] 2026-01-16 11:10:28,661 | INFO     | all job control threads have been joined
[2026-01-16 06:11:03] 2026-01-16 11:10:29,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 06:11:03] 2026-01-16 11:10:29,161 | INFO     | [job] retrieve thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,177 | INFO     | [data] control thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,334 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,530 | INFO     | [job] job monitor thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,566 | INFO     | [payload] control thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,623 | INFO     | [payload] failed_post thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,649 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,667 | INFO     | [job] control thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,734 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,752 | INFO     | [data] copytool_in thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:29,841 | INFO     | [job] validate thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:30,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 06:11:03] 2026-01-16 11:10:30,288 | INFO     | [payload] validate_post thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:30,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 06:11:03] 2026-01-16 11:10:31,087 | INFO     | [data] copytool_out thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:31,657 | INFO     | [job] queue monitor thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:34,158 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 06:11:03] 2026-01-16 11:10:54,475 | INFO     | [monitor] cgroup control has ended
[2026-01-16 06:11:03] 2026-01-16 11:10:56,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379145303872)>', '<ExcThread(monitor, started 140378514646784)>']
[2026-01-16 06:11:03] 2026-01-16 11:10:58,552 | INFO     | PID=72564 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 06:11:03] 2026-01-16 11:10:58,552 | INFO     | .. there are 25 such processes running
[2026-01-16 06:11:03] 2026-01-16 11:10:58,553 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 06:11:03] 2026-01-16 11:10:58,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 06:11:03] 2026-01-16 11:10:58,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 06:11:03] 2026-01-16 11:10:58,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 06:11:03] 2026-01-16 11:10:58,553 | INFO     | [monitor] control thread has ended
[2026-01-16 06:11:03] 2026-01-16 11:11:01,546 | INFO     | all workflow threads have been joined
[2026-01-16 06:11:03] 2026-01-16 11:11:01,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 06:11:03] 2026-01-16 11:11:01,546 | INFO     | traces error code: 0
[2026-01-16 06:11:03] 2026-01-16 11:11:01,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 06:11:03] 2026-01-16 11:11:01,954 [wrapper] ==== pilot stdout END ====
[2026-01-16 06:11:03] 2026-01-16 11:11:01,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 06:11:03] 2026-01-16 11:11:02,011 [wrapper] pilotpid: 72564
[2026-01-16 06:11:03] 2026-01-16 11:11:02,051 [wrapper] Pilot exit status: 0
[2026-01-16 06:11:03] 2026-01-16 11:11:02,222 [wrapper] pandaids: 6962322606
[2026-01-16 06:11:03] 2026-01-16 11:11:02,680 [wrapper] cleanup supervisor_pilot 2363281 72565
[2026-01-16 06:11:03] 2026-01-16 11:11:02,726 [wrapper] Test setup, not cleaning
[2026-01-16 06:11:03] 2026-01-16 11:11:02,740 [wrapper] apfmon messages muted
[2026-01-16 06:11:03] 2026-01-16 11:11:02,745 [wrapper] ==== wrapper stdout END ====
[2026-01-16 06:11:03] 2026-01-16 11:11:02,749 [wrapper] ==== wrapper stderr END ====
[2026-01-16 06:11:03]  *** Error codes and diagnostics ***
[2026-01-16 06:11:03]     "exeErrorCode": 0,
[2026-01-16 06:11:03]     "exeErrorDiag": "",
[2026-01-16 06:11:03]     "pilotErrorCode": 0,
[2026-01-16 06:11:03]     "pilotErrorDiag": "",
[2026-01-16 06:11:03]  *** Listing of results directory ***
[2026-01-16 06:11:03] total 448056
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-16 06:11:03] -rwx------. 1 boincer umatlas     36322 Jan  7 16:06 runpilot2-wrapper.sh
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:12 queuedata.json
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas       100 Jan 15 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 06:11:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 22:05 run_atlas
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas       105 Jan 15 22:05 job.xml
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas 224389434 Jan 15 22:05 EVNT.47898824._000723.pool.root.1
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 22:05 start_atlas.sh
[2026-01-16 06:11:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 22:05 shared
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 22:05 input.tar.gz
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas         0 Jan 15 22:05 boinc_lockfile
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas      2519 Jan 15 22:05 pandaJob.out
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas        57 Jan 15 22:05 setup.sh.local
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas   1004083 Jan 15 22:05 agis_schedconf.cvmfs.json
[2026-01-16 06:11:03] drwx------. 5 boincer umatlas      4096 Jan 15 22:05 pilot3
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas 222429448 Jan 16 06:09 HITS.47898826._015475.pool.root.1
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas      6658 Jan 16 06:09 init_data.xml
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas       531 Jan 16 06:09 boinc_task_state.xml
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas      1044 Jan 16 06:09 memory_monitor_summary.json
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas   1516246 Jan 16 06:10 agis_ddmendpoints.agis.ALL.json
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas    680097 Jan 16 06:10 log.47898826._015475.job.log.tgz.1
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas      7823 Jan 16 06:10 heartbeat.json
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 16 06:10 boinc_mmap_file
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas        28 Jan 16 06:10 wrapper_checkpoint.txt
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas        95 Jan 16 06:10 pilot_heartbeat.json
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas      4822 Jan 16 06:11 pilotlog.txt
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas   3349611 Jan 16 06:11 log.47898826._015475.job.log.1
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas       357 Jan 16 06:11 output.list
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas       620 Jan 16 06:11 runtime_log
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas   4044800 Jan 16 06:11 result.tar.gz
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas       656 Jan 16 06:11 Y9hMDmXupx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF2iKDmXL1zim.diag
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas      9330 Jan 16 06:11 runtime_log.err
[2026-01-16 06:11:03] -rw-r--r--. 1 boincer umatlas     21271 Jan 16 06:11 stderr.txt
[2026-01-16 06:11:03] HITS file was successfully produced:
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas 222429448 Jan 16 06:09 shared/HITS.pool.root.1
[2026-01-16 06:11:03]  *** Contents of shared directory: ***
[2026-01-16 06:11:03] total 440904
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas 224389434 Jan 15 22:05 ATLAS.root_0
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 22:05 start_atlas.sh
[2026-01-16 06:11:03] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 22:05 input.tar.gz
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas 222429448 Jan 16 06:09 HITS.pool.root.1
[2026-01-16 06:11:03] -rw-------. 1 boincer umatlas   4044800 Jan 16 06:11 result.tar.gz
06:11:04 (66115): run_atlas exited; CPU time 72998.532049
06:11:04 (66115): called boinc_finish(0)

</stderr_txt>
]]>

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