Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:02 (9192): wrapper (7.7.26015): starting
01:51:02 (9192): wrapper: running run_atlas (--nthreads 8)
[2026-01-16 01:51:02] Arguments: --nthreads 8
[2026-01-16 01:51:02] Threads: 8
[2026-01-16 01:51:02] Checking for CVMFS
[2026-01-16 01:51:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 01:51:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 01:51:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 01:51:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 01:51:04] 2.11.2.0 12981 44796 130108 155190 2 61 21639084 25165824 1060 130560 0 18224293 99.824 14841057 3900 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-16 01:51:04] CVMFS is ok
[2026-01-16 01:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 01:51:04] Checking for apptainer binary...
[2026-01-16 01:51:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 01:51:04] Running /usr/bin/apptainer --version
[2026-01-16 01:51:05] apptainer version 1.3.2-1.el7
[2026-01-16 01:51:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 01:51:31] cg-vwn366.simple-grid.lan
[2026-01-16 01:51:31] apptainer works
[2026-01-16 01:51:31] Set ATHENA_PROC_NUMBER=8
[2026-01-16 01:51:31] Set ATHENA_CORE_NUMBER=8
[2026-01-16 01:51:31] Starting ATLAS job with PandaID=6962314795
[2026-01-16 01:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 06:31:24]  *** The last 200 lines of the pilot log: ***
[2026-01-16 06:31:24] 2026-01-16 05:30:32,345 | INFO     | time since job start (16486s) is within the limit (174528.0s)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,691 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 06:31:24] 2026-01-16 05:30:32,692 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-16 06:31:24] 2026-01-16 05:30:32,694 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6962314795/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,695 | INFO     | extracted standard info from prmon json
[2026-01-16 06:31:24] 2026-01-16 05:30:32,695 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 06:31:24] 2026-01-16 05:30:32,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 06:31:24] 2026-01-16 05:30:32,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 06:31:24] 2026-01-16 05:30:32,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 06:31:24] 2026-01-16 05:30:32,701 | INFO     | fitting pss+swap vs Time
[2026-01-16 06:31:24] 2026-01-16 05:30:32,701 | INFO     | sum of square deviations: 5449944045.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,704 | INFO     | sum of deviations: 147529968513.99997
[2026-01-16 06:31:24] 2026-01-16 05:30:32,704 | INFO     | mean x: 1768533383.5
[2026-01-16 06:31:24] 2026-01-16 05:30:32,704 | INFO     | mean y: 2418876.8
[2026-01-16 06:31:24] 2026-01-16 05:30:32,704 | INFO     | intersect: -47871774368.00658
[2026-01-16 06:31:24] 2026-01-16 05:30:32,704 | INFO     | chi2: 8.061059861200686
[2026-01-16 06:31:24] 2026-01-16 05:30:32,705 | INFO     | sum of square deviations: 5141528960.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,707 | INFO     | sum of deviations: 161718006460.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,707 | INFO     | mean x: 1768533231.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,707 | INFO     | mean y: 2425759.431372549
[2026-01-16 06:31:24] 2026-01-16 05:30:32,708 | INFO     | intersect: -55623764562.6752
[2026-01-16 06:31:24] 2026-01-16 05:30:32,708 | INFO     | chi2: 7.346015538629268
[2026-01-16 06:31:24] 2026-01-16 05:30:32,708 | INFO     | current chi2=7.346015538629268 (change=8.87035123027747 %)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,708 | INFO     | right removable region: 254
[2026-01-16 06:31:24] 2026-01-16 05:30:32,709 | INFO     | sum of square deviations: 5141528960.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,718 | INFO     | sum of deviations: 59177210016.99998
[2026-01-16 06:31:24] 2026-01-16 05:30:32,718 | INFO     | mean x: 1768533536.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,718 | INFO     | mean y: 2462535.231372549
[2026-01-16 06:31:24] 2026-01-16 05:30:32,719 | INFO     | intersect: -20352743337.6107
[2026-01-16 06:31:24] 2026-01-16 05:30:32,719 | INFO     | chi2: 3.304477528781109
[2026-01-16 06:31:24] 2026-01-16 05:30:32,719 | INFO     | current chi2=3.304477528781109 (change=59.006909938900876 %)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,720 | INFO     | sum of square deviations: 4844974562.5
[2026-01-16 06:31:24] 2026-01-16 05:30:32,722 | INFO     | sum of deviations: -4521590870.5
[2026-01-16 06:31:24] 2026-01-16 05:30:32,722 | INFO     | mean x: 1768533688.5
[2026-01-16 06:31:24] 2026-01-16 05:30:32,722 | INFO     | mean y: 2495219.284
[2026-01-16 06:31:24] 2026-01-16 05:30:32,722 | INFO     | intersect: 1652985985.940794
[2026-01-16 06:31:24] 2026-01-16 05:30:32,723 | INFO     | chi2: 0.9190951612086551
[2026-01-16 06:31:24] 2026-01-16 05:30:32,723 | INFO     | current chi2=0.9190951612086551 (change=72.18636976031509 %)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,723 | INFO     | sum of square deviations: 4560048290.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,725 | INFO     | sum of deviations: -16616988162.000002
[2026-01-16 06:31:24] 2026-01-16 05:30:32,725 | INFO     | mean x: 1768533841.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,726 | INFO     | mean y: 2501693.4530612244
[2026-01-16 06:31:24] 2026-01-16 05:30:32,726 | INFO     | intersect: 6447105792.150752
[2026-01-16 06:31:24] 2026-01-16 05:30:32,726 | INFO     | chi2: 0.8225462821906746
[2026-01-16 06:31:24] 2026-01-16 05:30:32,726 | INFO     | current chi2=0.8225462821906746 (change=10.50477503232788 %)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,726 | INFO     | left removable region: 30
[2026-01-16 06:31:24] 2026-01-16 05:30:32,727 | INFO     | sum of square deviations: 3485088600.0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,729 | INFO     | sum of deviations: -5017681209.000001
[2026-01-16 06:31:24] 2026-01-16 05:30:32,729 | INFO     | mean x: 1768534115.5
[2026-01-16 06:31:24] 2026-01-16 05:30:32,729 | INFO     | mean y: 2513570.785714286
[2026-01-16 06:31:24] 2026-01-16 05:30:32,729 | INFO     | intersect: 2548773197.820673
[2026-01-16 06:31:24] 2026-01-16 05:30:32,729 | INFO     | chi2: 0.005948263132676398
[2026-01-16 06:31:24] 2026-01-16 05:30:32,730 | INFO     | current memory leak: -1.44 B/s (using 224 data points, chi2=0.01)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,730 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | ..............................
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . Timing measurements:
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . get job = 0 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . initial setup = 11 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . payload setup = 150 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . stage-in = 0 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . payload execution = 15998 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . stage-out = 3 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | . log creation = 1 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,731 | INFO     | ..............................
[2026-01-16 06:31:24] 2026-01-16 05:30:32,887 | INFO     | 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | job summary report
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | --------------------------------------------------
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | PanDA job id: 6962314795
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | task id: 47898826
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | errors: (none)
[2026-01-16 06:31:24] 2026-01-16 05:30:32,888 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | pilot state: finished 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | transexitcode: 0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | exeerrorcode: 0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | exeerrordiag: 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | exitcode: 0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | exitmsg: OK
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | cpuconsumptiontime: 73224 s
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | nevents: 400
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | neventsw: 0
[2026-01-16 06:31:24] 2026-01-16 05:30:32,889 | INFO     | pid: 19415
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | pgrp: 19415
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | corecount: 8
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | event service: False
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | sizes: {0: 2283737, 1: 2283992, 12: 2283992, 23: 2284020, 33: 2284048, 44: 2284104, 55: 2284260, 66: 2284288, 76: 2284316, 87: 2284372, 98: 2284400, 105: 2284970, 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | --------------------------------------------------
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | 
[2026-01-16 06:31:24] 2026-01-16 05:30:32,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-16 06:31:24] 2026-01-16 05:30:33,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 06:31:24] 2026-01-16 05:30:33,488 | INFO     | job 6962314795 has completed (purged errors)
[2026-01-16 06:31:24] 2026-01-16 05:30:33,488 | INFO     | overall cleanup function is called
[2026-01-16 06:31:24] 2026-01-16 05:30:34,496 | INFO     | --- collectZombieJob: --- 10, [19415]
[2026-01-16 06:31:24] 2026-01-16 05:30:34,497 | INFO     | zombie collector waiting for pid 19415
[2026-01-16 06:31:24] 2026-01-16 05:30:34,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 06:31:24] 2026-01-16 05:30:34,497 | INFO     | collected zombie processes
[2026-01-16 06:31:24] 2026-01-16 05:30:34,497 | INFO     | will attempt to kill all subprocesses of pid=19415
[2026-01-16 06:31:24] 2026-01-16 05:30:34,570 | INFO     | process IDs to be killed: [19415] (in reverse order)
[2026-01-16 06:31:24] 2026-01-16 05:30:35,470 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 06:31:24] 2026-01-16 05:30:35,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 06:31:24] 2026-01-16 05:30:35,480 | INFO     | did not find any defunct processes belonging to 19415
[2026-01-16 06:31:24] 2026-01-16 05:30:35,482 | INFO     | did not find any defunct processes belonging to 19415
[2026-01-16 06:31:24] 2026-01-16 05:30:35,482 | INFO     | ready for new job
[2026-01-16 06:31:24] 2026-01-16 05:30:35,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 06:31:24] 2026-01-16 05:30:35,484 | INFO     | ***************************************
[2026-01-16 06:31:24] 2026-01-16 05:30:35,484 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 06:31:24] 2026-01-16 05:30:35,485 | INFO     | ***************************************
[2026-01-16 06:31:24] 2026-01-16 05:30:35,485 | INFO     | 
[2026-01-16 06:31:24] 2026-01-16 05:30:35,485 | INFO     | pilot is running in a VM
[2026-01-16 06:31:24] 2026-01-16 05:30:35,485 | INFO     | architecture information:
[2026-01-16 06:31:24] 2026-01-16 05:30:35,503 | INFO     | executing command: cat /etc/os-release
[2026-01-16 06:31:24] 2026-01-16 05:30:35,825 | INFO     | cat /etc/os-release:
[2026-01-16 06:31:24] NAME="CentOS Linux"
[2026-01-16 06:31:24] VERSION="7 (Core)"
[2026-01-16 06:31:24] ID="centos"
[2026-01-16 06:31:24] ID_LIKE="rhel fedora"
[2026-01-16 06:31:24] VERSION_ID="7"
[2026-01-16 06:31:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 06:31:24] ANSI_COLOR="0;31"
[2026-01-16 06:31:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 06:31:24] HOME_URL="https://www.centos.org/"
[2026-01-16 06:31:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 06:31:24] 
[2026-01-16 06:31:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 06:31:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 06:31:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 06:31:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 06:31:24] 
[2026-01-16 06:31:24] 2026-01-16 05:30:35,825 | INFO     | ***************************************
[2026-01-16 06:31:24] 2026-01-16 05:30:36,329 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-16 06:31:24] 2026-01-16 05:30:36,554 | INFO     | sufficient remaining disk space (496396926976 B)
[2026-01-16 06:31:24] 2026-01-16 05:30:36,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 06:31:24] 2026-01-16 05:30:36,555 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 06:31:24] 2026-01-16 05:30:36,555 | INFO     | update_server=False
[2026-01-16 06:31:24] 2026-01-16 05:30:36,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 06:31:24] 2026-01-16 05:30:36,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 06:31:24] 2026-01-16 05:30:36,555 | INFO     | aborting loop
[2026-01-16 06:31:24] 2026-01-16 05:30:36,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 06:31:24] 2026-01-16 05:30:36,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 06:31:24] 2026-01-16 05:30:37,012 | INFO     | all data control threads have been joined
[2026-01-16 06:31:24] 2026-01-16 05:30:37,529 | INFO     | all job control threads have been joined
[2026-01-16 06:31:24] 2026-01-16 05:30:37,561 | INFO     | [job] retrieve thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:37,561 | INFO     | [job] job monitor thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:37,640 | INFO     | all payload control threads have been joined
[2026-01-16 06:31:24] 2026-01-16 05:30:37,777 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:37,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 06:31:24] 2026-01-16 05:30:37,972 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,019 | INFO     | [data] control thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,457 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,536 | INFO     | [job] control thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,564 | INFO     | [data] copytool_out thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,596 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,647 | INFO     | [payload] control thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,700 | INFO     | [payload] failed_post thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,713 | INFO     | [job] validate thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,788 | INFO     | [data] copytool_in thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,863 | INFO     | [payload] validate_post thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:38,914 | INFO     | [job] queue monitor thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:30:40,570 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 06:31:24] 2026-01-16 05:31:05,479 | INFO     | PID=12941 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 06:31:24] 2026-01-16 05:31:05,479 | INFO     | .. there are 2 such processes running
[2026-01-16 06:31:24] 2026-01-16 05:31:05,480 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 06:31:24] 2026-01-16 05:31:05,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 06:31:24] 2026-01-16 05:31:05,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 06:31:24] 2026-01-16 05:31:13,740 | INFO     | [monitor] cgroup control has ended
[2026-01-16 06:31:24] 2026-01-16 05:31:14,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695121274688)>', '<ExcThread(monitor, started 139694406887168)>']
[2026-01-16 06:31:24] 2026-01-16 05:31:15,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 06:31:24] 2026-01-16 05:31:15,540 | INFO     | [monitor] control thread has ended
[2026-01-16 06:31:24] 2026-01-16 05:31:19,672 | INFO     | all workflow threads have been joined
[2026-01-16 06:31:24] 2026-01-16 05:31:19,673 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 06:31:24] 2026-01-16 05:31:19,673 | INFO     | traces error code: 0
[2026-01-16 06:31:24] 2026-01-16 05:31:19,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 06:31:24] 2026-01-16 05:31:20,116 [wrapper] ==== pilot stdout END ====
[2026-01-16 06:31:24] 2026-01-16 05:31:20,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 06:31:24] 2026-01-16 05:31:20,284 [wrapper] pilotpid: 12941
[2026-01-16 06:31:24] 2026-01-16 05:31:20,378 [wrapper] Pilot exit status: 0
[2026-01-16 06:31:24] 2026-01-16 05:31:20,895 [wrapper] pandaids: 6962314795
[2026-01-16 06:31:24] 2026-01-16 05:31:21,745 [wrapper] cleanup supervisor_pilot 29096 12942
[2026-01-16 06:31:24] 2026-01-16 05:31:21,889 [wrapper] Test setup, not cleaning
[2026-01-16 06:31:24] 2026-01-16 05:31:22,009 [wrapper] apfmon messages muted
[2026-01-16 06:31:24] 2026-01-16 05:31:22,133 [wrapper] ==== wrapper stdout END ====
[2026-01-16 06:31:24] 2026-01-16 05:31:22,192 [wrapper] ==== wrapper stderr END ====
[2026-01-16 06:31:24]  *** Error codes and diagnostics ***
[2026-01-16 06:31:24]     "exeErrorCode": 0,
[2026-01-16 06:31:24]     "exeErrorDiag": "",
[2026-01-16 06:31:24]     "pilotErrorCode": 0,
[2026-01-16 06:31:24]     "pilotErrorDiag": "",
[2026-01-16 06:31:24]  *** Listing of results directory ***
[2026-01-16 06:31:24] total 438948
[2026-01-16 06:31:24] -rwx------. 1 boinc boinc     36322 Jan  7 21:54 runpilot2-wrapper.sh
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:55 queuedata.json
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc       100 Jan 16 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 06:31:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 16 01:51 run_atlas
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc       105 Jan 16 01:51 job.xml
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc      6390 Jan 16 01:51 init_data.xml
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc 223187333 Jan 16 01:51 EVNT.47898824._000287.pool.root.1
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc     15847 Jan 16 01:51 start_atlas.sh
[2026-01-16 06:31:24] drwxrwx--x. 2 boinc boinc        68 Jan 16 01:51 shared
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc    592391 Jan 16 01:51 input.tar.gz
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc         0 Jan 16 01:51 boinc_lockfile
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc      2516 Jan 16 01:51 pandaJob.out
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc   1004091 Jan 16 01:55 agis_schedconf.cvmfs.json
[2026-01-16 06:31:24] drwx------. 5 boinc boinc      4096 Jan 16 01:55 pilot3
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc 216966657 Jan 16 06:27 HITS.47898826._011487.pool.root.1
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc       531 Jan 16 06:27 boinc_task_state.xml
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc      1021 Jan 16 06:28 memory_monitor_summary.json
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc   1516246 Jan 16 06:28 agis_ddmendpoints.agis.ALL.json
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc    494976 Jan 16 06:28 log.47898826._011487.job.log.tgz.1
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc      7785 Jan 16 06:30 heartbeat.json
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc        95 Jan 16 06:31 pilot_heartbeat.json
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc      8192 Jan 16 06:31 boinc_mmap_file
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc        28 Jan 16 06:31 wrapper_checkpoint.txt
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc      4884 Jan 16 06:31 pilotlog.txt
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc   2211911 Jan 16 06:31 log.47898826._011487.job.log.1
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc       357 Jan 16 06:31 output.list
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc       620 Jan 16 06:31 runtime_log
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc   2723840 Jan 16 06:31 result.tar.gz
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc       657 Jan 16 06:31 xDCODmajpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0TdKDmeVm9cn.diag
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc      8817 Jan 16 06:31 runtime_log.err
[2026-01-16 06:31:24] -rw-r--r--. 1 boinc boinc     20752 Jan 16 06:31 stderr.txt
[2026-01-16 06:31:24] HITS file was successfully produced:
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc 216966657 Jan 16 06:27 shared/HITS.pool.root.1
[2026-01-16 06:31:24]  *** Contents of shared directory: ***
[2026-01-16 06:31:24] total 433100
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc 223187333 Jan 16 01:51 ATLAS.root_0
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc     15847 Jan 16 01:51 start_atlas.sh
[2026-01-16 06:31:24] -rw-r--r--. 2 boinc boinc    592391 Jan 16 01:51 input.tar.gz
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc 216966657 Jan 16 06:27 HITS.pool.root.1
[2026-01-16 06:31:24] -rw-------. 1 boinc boinc   2723840 Jan 16 06:31 result.tar.gz
06:31:25 (9192): run_atlas exited; CPU time 73370.175139
06:31:25 (9192): called boinc_finish(0)

</stderr_txt>
]]>

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