Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:43 (2795953): wrapper (7.7.26015): starting
19:23:43 (2795953): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 19:23:43] Arguments: --nthreads 3
[2026-01-15 19:23:43] Threads: 3
[2026-01-15 19:23:43] Checking for CVMFS
[2026-01-15 19:23:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 19:23:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 19:23:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 19:23:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 19:23:44] 2.9.2.0 2796077 0 29980 155181 3 1 20780447 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 19:23:44] CVMFS is ok
[2026-01-15 19:23:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 19:23:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 19:23:44] Further information can be found at the LHC@home message board.
[2026-01-15 19:23:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 19:23:44] Checking for apptainer binary...
[2026-01-15 19:23:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 19:23:44] Running /usr/bin/apptainer --version
[2026-01-15 19:23:44] apptainer version 1.4.2-2.1
[2026-01-15 19:23:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 19:23:44] cosA133a
[2026-01-15 19:23:44] apptainer works
[2026-01-15 19:23:44] Set ATHENA_PROC_NUMBER=3
[2026-01-15 19:23:44] Set ATHENA_CORE_NUMBER=3
[2026-01-15 19:23:44] Starting ATLAS job with PandaID=6971655438
[2026-01-15 19:23:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 20:05:09]  *** The last 200 lines of the pilot log: ***
[2026-01-15 20:05:09]  direct_access_lan=False
[2026-01-15 20:05:09]  direct_access_wan=False
[2026-01-15 20:05:09]  domain=
[2026-01-15 20:05:09]  filesize=628556
[2026-01-15 20:05:09]  filetype=log
[2026-01-15 20:05:09]  guid=cffa9cdf-95a6-4292-91b8-6813b834057e
[2026-01-15 20:05:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-15 20:05:09]  is_altstaged=None
[2026-01-15 20:05:09]  is_tar=False
[2026-01-15 20:05:09]  lfn=log.47962010._003584.job.log.tgz.1
[2026-01-15 20:05:09]  mtime=0
[2026-01-15 20:05:09]  protocol_id=None
[2026-01-15 20:05:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 20:05:09]  replicas=None
[2026-01-15 20:05:09]  scope=mc16_13TeV
[2026-01-15 20:05:09]  status=None
[2026-01-15 20:05:09]  status_code=0
[2026-01-15 20:05:09]  storage_token=
[2026-01-15 20:05:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6971655438/log.47962010._003584.job.log.tgz.1
[2026-01-15 20:05:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5e/d6/log.47962010._003584.job.log.tgz.1
[2026-01-15 20:05:09]  workdir=None
[2026-01-15 20:05:09] ]
[2026-01-15 20:05:09] 2026-01-15 19:04:28,642 | INFO     | transferring file log.47962010._003584.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6971655438/log.47962010._003584.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 20:05:09] 2026-01-15 19:04:28,642 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6971655438/log.47962010._003584.job.log.tgz.1 /local/data/boinc/slots/0/log.47962010._0035
[2026-01-15 20:05:09] 2026-01-15 19:04:28,654 | INFO     | adding to output.list: log.47962010._003584.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5e/d6/log.47962010._003584.job.log.tgz.
[2026-01-15 20:05:09] 2026-01-15 19:04:28,655 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 20:05:09] 2026-01-15 19:04:28,655 | INFO     | summary of transferred files:
[2026-01-15 20:05:09] 2026-01-15 19:04:28,655 | INFO     |  -- lfn=log.47962010._003584.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 20:05:09] 2026-01-15 19:04:28,655 | INFO     | stage-out finished correctly
[2026-01-15 20:05:09] 2026-01-15 19:04:28,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 20:05:09] 2026-01-15 19:04:29,221 | WARNING  | process 2804582 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 20:05:09] 2026-01-15 19:04:29,221 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6971655438/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,253 | INFO     | number of running child processes to parent process 2804582: 1
[2026-01-15 20:05:09] 2026-01-15 19:04:29,253 | INFO     | maximum number of monitored processes: 8
[2026-01-15 20:05:09] 2026-01-15 19:04:29,271 | INFO     | job 6971655438 has state=finished
[2026-01-15 20:05:09] 2026-01-15 19:04:29,272 | INFO     | preparing for final server update for job 6971655438 in state='finished'
[2026-01-15 20:05:09] 2026-01-15 19:04:29,272 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6971655438/jobReport.json
[2026-01-15 20:05:09] 2026-01-15 19:04:29,274 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-15 20:05:09] 2026-01-15 19:04:29,275 | INFO     | this job has now completed (state=finished)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,275 | INFO     | log transfer has been attempted: DONE
[2026-01-15 20:05:09] 2026-01-15 19:04:29,275 | INFO     | job 6971655438 has finished - writing final server update
[2026-01-15 20:05:09] 2026-01-15 19:04:29,275 | INFO     | total number of processed events: 50 (read)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,277 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6971655438/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,277 | INFO     | extracted standard info from prmon json
[2026-01-15 20:05:09] 2026-01-15 19:04:29,277 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 20:05:09] 2026-01-15 19:04:29,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | fitting pss+swap vs Time
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | sum of square deviations: 11133232.0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | sum of deviations: 1608121650.0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | mean x: 1768502741.0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | mean y: 2046745.4848484849
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | intersect: -255446465051.12933
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | chi2: 0.29552501582706375
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | current memory leak: 144.44 B/s (using 33 data points, chi2=0.30)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | could have reported an average CPU frequency of 4393 MHz (5 samples)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | ..............................
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . Timing measurements:
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . get job = 0 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . initial setup = 7 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . payload setup = 6 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . stage-in = 0 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . payload execution = 2406 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . stage-out = 0 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | . log creation = 0 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,278 | INFO     | ..............................
[2026-01-15 20:05:09] 2026-01-15 19:04:29,517 | INFO     | 
[2026-01-15 20:05:09] 2026-01-15 19:04:29,518 | INFO     | job summary report
[2026-01-15 20:05:09] 2026-01-15 19:04:29,518 | INFO     | --------------------------------------------------
[2026-01-15 20:05:09] 2026-01-15 19:04:29,518 | INFO     | PanDA job id: 6971655438
[2026-01-15 20:05:09] 2026-01-15 19:04:29,518 | INFO     | task id: 47962010
[2026-01-15 20:05:09] 2026-01-15 19:04:29,518 | INFO     | errors: (none)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | pilot state: finished 
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | transexitcode: 0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | exeerrorcode: 0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | exeerrordiag: 
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | exitcode: 0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,519 | INFO     | exitmsg: OK
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | cpuconsumptiontime: 5593 s
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | nevents: 50
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | neventsw: 0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | pid: 2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | pgrp: 2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:29,520 | INFO     | corecount: 3
[2026-01-15 20:05:09] 2026-01-15 19:04:29,521 | INFO     | event service: False
[2026-01-15 20:05:09] 2026-01-15 19:04:29,521 | INFO     | sizes: {0: 2283742, 1: 2284863, 11: 2284863, 2417: 2310829, 2418: 2319829, 2419: 2320291}
[2026-01-15 20:05:09] 2026-01-15 19:04:29,521 | INFO     | --------------------------------------------------
[2026-01-15 20:05:09] 2026-01-15 19:04:29,521 | INFO     | 
[2026-01-15 20:05:09] 2026-01-15 19:04:29,521 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 20:05:09] 2026-01-15 19:04:29,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | job 6971655438 has completed (purged errors)
[2026-01-15 20:05:09] 2026-01-15 19:04:29,535 | INFO     | overall cleanup function is called
[2026-01-15 20:05:09] 2026-01-15 19:04:30,542 | INFO     | --- collectZombieJob: --- 10, [2804582]
[2026-01-15 20:05:09] 2026-01-15 19:04:30,542 | INFO     | zombie collector waiting for pid 2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:30,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 20:05:09] 2026-01-15 19:04:30,543 | INFO     | collected zombie processes
[2026-01-15 20:05:09] 2026-01-15 19:04:30,543 | INFO     | will attempt to kill all subprocesses of pid=2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:30,579 | INFO     | process IDs to be killed: [2804582] (in reverse order)
[2026-01-15 20:05:09] 2026-01-15 19:04:30,603 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 20:05:09] 2026-01-15 19:04:30,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 20:05:09] 2026-01-15 19:04:30,604 | INFO     | did not find any defunct processes belonging to 2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:30,605 | INFO     | did not find any defunct processes belonging to 2804582
[2026-01-15 20:05:09] 2026-01-15 19:04:30,605 | INFO     | ready for new job
[2026-01-15 20:05:09] 2026-01-15 19:04:30,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 20:05:09] 2026-01-15 19:04:30,606 | INFO     | **************************************
[2026-01-15 20:05:09] 2026-01-15 19:04:30,606 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-15 20:05:09] 2026-01-15 19:04:30,606 | INFO     | **************************************
[2026-01-15 20:05:09] 2026-01-15 19:04:30,606 | INFO     | 
[2026-01-15 20:05:09] 2026-01-15 19:04:30,606 | INFO     | architecture information:
[2026-01-15 20:05:09] 2026-01-15 19:04:30,607 | INFO     | executing command: cat /etc/os-release
[2026-01-15 20:05:09] 2026-01-15 19:04:30,617 | INFO     | cat /etc/os-release:
[2026-01-15 20:05:09] NAME="CentOS Linux"
[2026-01-15 20:05:09] VERSION="7 (Core)"
[2026-01-15 20:05:09] ID="centos"
[2026-01-15 20:05:09] ID_LIKE="rhel fedora"
[2026-01-15 20:05:09] VERSION_ID="7"
[2026-01-15 20:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 20:05:09] ANSI_COLOR="0;31"
[2026-01-15 20:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 20:05:09] HOME_URL="https://www.centos.org/"
[2026-01-15 20:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 20:05:09] 
[2026-01-15 20:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 20:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 20:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 20:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 20:05:09] 
[2026-01-15 20:05:09] 2026-01-15 19:04:30,617 | INFO     | **************************************
[2026-01-15 20:05:09] 2026-01-15 19:04:31,120 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | INFO     | sufficient remaining disk space (340430684160 B)
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | INFO     | update_server=False
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 20:05:09] 2026-01-15 19:04:31,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 20:05:09] 2026-01-15 19:04:31,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 20:05:09] 2026-01-15 19:04:31,135 | INFO     | aborting loop
[2026-01-15 20:05:09] 2026-01-15 19:04:31,553 | INFO     | all payload control threads have been joined
[2026-01-15 20:05:09] 2026-01-15 19:04:31,670 | INFO     | all data control threads have been joined
[2026-01-15 20:05:09] 2026-01-15 19:04:31,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 20:05:09] 2026-01-15 19:04:32,045 | INFO     | all job control threads have been joined
[2026-01-15 20:05:09] 2026-01-15 19:04:32,140 | INFO     | [job] queue monitor thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,141 | INFO     | [job] retrieve thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,141 | INFO     | [job] job monitor thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,161 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,233 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,336 | INFO     | [payload] failed_post thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,378 | INFO     | [data] copytool_in thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,559 | INFO     | [payload] control thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,676 | INFO     | [data] control thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:32,848 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:33,051 | INFO     | [job] control thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:33,176 | INFO     | [payload] validate_post thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:33,617 | INFO     | [job] validate thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:33,697 | INFO     | [data] copytool_out thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:04:35,138 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 20:05:09] 2026-01-15 19:05:01,400 | INFO     | PID=2800151 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 20:05:09] 2026-01-15 19:05:01,400 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 20:05:09] 2026-01-15 19:05:01,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 20:05:09] 2026-01-15 19:05:01,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 20:05:09] 2026-01-15 19:05:02,813 | INFO     | [monitor] cgroup control has ended
[2026-01-15 20:05:09] 2026-01-15 19:05:04,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220109600576)>', '<ExcThread(monitor, started 140219265312512)>']
[2026-01-15 20:05:09] 2026-01-15 19:05:04,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 20:05:09] 2026-01-15 19:05:04,417 | INFO     | [monitor] control thread has ended
[2026-01-15 20:05:09] 2026-01-15 19:05:09,386 | INFO     | all workflow threads have been joined
[2026-01-15 20:05:09] 2026-01-15 19:05:09,386 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 20:05:09] 2026-01-15 19:05:09,386 | INFO     | traces error code: 0
[2026-01-15 20:05:09] 2026-01-15 19:05:09,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 20:05:09] 2026-01-15 19:05:09,430 [wrapper] ==== pilot stdout END ====
[2026-01-15 20:05:09] 2026-01-15 19:05:09,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 20:05:09] 2026-01-15 19:05:09,437 [wrapper] pilotpid: 2800151
[2026-01-15 20:05:09] 2026-01-15 19:05:09,440 [wrapper] Pilot exit status: 0
[2026-01-15 20:05:09] 2026-01-15 19:05:09,447 [wrapper] pandaids: 6971655438
[2026-01-15 20:05:09] 2026-01-15 19:05:09,463 [wrapper] cleanup supervisor_pilot 2809545 2800152
[2026-01-15 20:05:09] 2026-01-15 19:05:09,466 [wrapper] Test setup, not cleaning
[2026-01-15 20:05:09] 2026-01-15 19:05:09,469 [wrapper] apfmon messages muted
[2026-01-15 20:05:09] 2026-01-15 19:05:09,471 [wrapper] ==== wrapper stdout END ====
[2026-01-15 20:05:09] 2026-01-15 19:05:09,474 [wrapper] ==== wrapper stderr END ====
[2026-01-15 20:05:09]  *** Error codes and diagnostics ***
[2026-01-15 20:05:09]     "exeErrorCode": 0,
[2026-01-15 20:05:09]     "exeErrorDiag": "",
[2026-01-15 20:05:09]     "pilotErrorCode": 0,
[2026-01-15 20:05:09]     "pilotErrorDiag": "",
[2026-01-15 20:05:09]  *** Listing of results directory ***
[2026-01-15 20:05:09] total 429408
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc    584422 Jan 15 19:00 pilot3.tar.gz
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc      5111 Jan 15 19:22 queuedata.json
[2026-01-15 20:05:09] -rwx------ 1 boinc boinc     36322 Jan 15 19:23 runpilot2-wrapper.sh
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc       100 Jan 15 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 20:05:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 19:23 run_atlas
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc       105 Jan 15 19:23 job.xml
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc 391872885 Jan 15 19:23 EVNT.47962006._000119.pool.root.1
[2026-01-15 20:05:09] drwxrwx--x 2 boinc boinc      4096 Jan 15 19:23 shared
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc    597978 Jan 15 19:23 input.tar.gz
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:23 start_atlas.sh
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:23 boinc_setup_complete
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc      6274 Jan 15 19:23 init_data.xml
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:23 boinc_lockfile
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc      2890 Jan 15 19:23 pandaJob.out
[2026-01-15 20:05:09] -rw------- 1 boinc boinc   1004083 Jan 15 19:23 agis_schedconf.cvmfs.json
[2026-01-15 20:05:09] -rw------- 1 boinc boinc   1516246 Jan 15 19:23 agis_ddmendpoints.agis.ALL.json
[2026-01-15 20:05:09] -rw------- 1 boinc boinc       428 Jan 15 19:23 workernode_map.json
[2026-01-15 20:05:09] drwx------ 5 boinc boinc      4096 Jan 15 19:23 pilot3
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc       528 Jan 15 19:59 boinc_task_state.xml
[2026-01-15 20:05:09] -rw------- 1 boinc boinc        95 Jan 15 20:04 pilot_heartbeat.json
[2026-01-15 20:05:09] -rw------- 1 boinc boinc  41867387 Jan 15 20:04 HITS.47962010._003584.pool.root.1
[2026-01-15 20:05:09] -rw------- 1 boinc boinc      1010 Jan 15 20:04 memory_monitor_summary.json
[2026-01-15 20:05:09] -rw------- 1 boinc boinc    628556 Jan 15 20:04 log.47962010._003584.job.log.tgz.1
[2026-01-15 20:05:09] -rw------- 1 boinc boinc      6850 Jan 15 20:04 heartbeat.json
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc        26 Jan 15 20:04 wrapper_checkpoint.txt
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc      8192 Jan 15 20:04 boinc_mmap_file
[2026-01-15 20:05:09] -rw------- 1 boinc boinc      4748 Jan 15 20:05 pilotlog.txt
[2026-01-15 20:05:09] -rw------- 1 boinc boinc    388530 Jan 15 20:05 log.47962010._003584.job.log.1
[2026-01-15 20:05:09] -rw------- 1 boinc boinc       353 Jan 15 20:05 output.list
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc       620 Jan 15 20:05 runtime_log
[2026-01-15 20:05:09] -rw------- 1 boinc boinc   1034240 Jan 15 20:05 result.tar.gz
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc      8906 Jan 15 20:05 runtime_log.err
[2026-01-15 20:05:09] -rw------- 1 boinc boinc       659 Jan 15 20:05 2RwMDmEBh08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJBvKDmUTXzKn.diag
[2026-01-15 20:05:09] -rw-r--r-- 1 boinc boinc     21027 Jan 15 20:05 stderr.txt
[2026-01-15 20:05:09] HITS file was successfully produced:
[2026-01-15 20:05:09] -rw------- 1 boinc boinc 41867387 Jan 15 20:04 shared/HITS.pool.root.1
[2026-01-15 20:05:09]  *** Contents of shared directory: ***
[2026-01-15 20:05:09] total 425196
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc 391872885 Jan 15 19:23 ATLAS.root_0
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc    597978 Jan 15 19:23 input.tar.gz
[2026-01-15 20:05:09] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:23 start_atlas.sh
[2026-01-15 20:05:09] -rw------- 1 boinc boinc  41867387 Jan 15 20:04 HITS.pool.root.1
[2026-01-15 20:05:09] -rw------- 1 boinc boinc   1034240 Jan 15 20:05 result.tar.gz
20:05:10 (2795953): run_atlas exited; CPU time 5593.473759
20:05:10 (2795953): called boinc_finish(0)

</stderr_txt>
]]>

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