Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:23:25 (11140): wrapper (7.7.26015): starting
13:23:25 (11140): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 13:23:25] Arguments: --nthreads 12
[2026-01-15 13:23:25] Threads: 12
[2026-01-15 13:23:25] Checking for CVMFS
[2026-01-15 13:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 13:23:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 13:23:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 13:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 13:23:25] 2.11.2.0 2913 360037 95900 155181 1 1 19403354 20275201 1 130560 1 153899312 99.948 21879206 16010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 13:23:25] CVMFS is ok
[2026-01-15 13:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 13:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 13:23:25] Further information can be found at the LHC@home message board.
[2026-01-15 13:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 13:23:25] Checking for apptainer binary...
[2026-01-15 13:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 13:23:25] Running /usr/bin/apptainer --version
[2026-01-15 13:23:25] apptainer version 1.3.2-1.el7
[2026-01-15 13:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 13:23:27] c-205-6.aglt2.org
[2026-01-15 13:23:27] apptainer works
[2026-01-15 13:23:27] Set ATHENA_PROC_NUMBER=12
[2026-01-15 13:23:27] Set ATHENA_CORE_NUMBER=12
[2026-01-15 13:23:27] Starting ATLAS job with PandaID=6971651292
[2026-01-15 13:23:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 13:57:55]  *** The last 200 lines of the pilot log: ***
[2026-01-15 13:57:55]  filetype=log
[2026-01-15 13:57:55]  guid=d946aba3-5615-439b-a640-9854976d2fa3
[2026-01-15 13:57:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-15 13:57:55]  is_altstaged=None
[2026-01-15 13:57:55]  is_tar=False
[2026-01-15 13:57:55]  lfn=log.47962010._003556.job.log.tgz.1
[2026-01-15 13:57:55]  mtime=0
[2026-01-15 13:57:55]  protocol_id=None
[2026-01-15 13:57:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 13:57:55]  replicas=None
[2026-01-15 13:57:55]  scope=mc16_13TeV
[2026-01-15 13:57:55]  status=None
[2026-01-15 13:57:55]  status_code=0
[2026-01-15 13:57:55]  storage_token=
[2026-01-15 13:57:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6971651292/log.47962010._003556.job.log.tgz.1
[2026-01-15 13:57:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/0c/85/log.47962010._003556.job.log.tgz.1
[2026-01-15 13:57:55]  workdir=None
[2026-01-15 13:57:55] ]
[2026-01-15 13:57:55] 2026-01-15 18:57:11,854 | INFO     | transferring file log.47962010._003556.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6971651292/log.47962010._003556.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 13:57:55] 2026-01-15 18:57:11,854 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6971651292/log.47962010._003556.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003556.job
[2026-01-15 13:57:55] 2026-01-15 18:57:11,877 | INFO     | adding to output.list: log.47962010._003556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/0c/85/log.47962010._003556.job.log.tgz.
[2026-01-15 13:57:55] 2026-01-15 18:57:11,877 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 13:57:55] 2026-01-15 18:57:11,878 | INFO     | summary of transferred files:
[2026-01-15 13:57:55] 2026-01-15 18:57:11,878 | INFO     |  -- lfn=log.47962010._003556.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 13:57:55] 2026-01-15 18:57:11,878 | INFO     | stage-out finished correctly
[2026-01-15 13:57:55] 2026-01-15 18:57:12,068 | INFO     | monitor loop #158: job 0:6971651292 is in state 'finished'
[2026-01-15 13:57:55] 2026-01-15 18:57:12,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:57:55] 2026-01-15 18:57:13,286 | INFO     | time since job start (2006s) is within the limit (349056.0s)
[2026-01-15 13:57:55] 2026-01-15 18:57:14,571 | INFO     | monitor loop #159: job 0:6971651292 is in state 'finished'
[2026-01-15 13:57:55] 2026-01-15 18:57:14,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,289 | INFO     | time since job start (2008s) is within the limit (349056.0s)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,347 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 13:57:55] 2026-01-15 18:57:15,426 | INFO     | job 6971651292 has state=finished
[2026-01-15 13:57:55] 2026-01-15 18:57:15,426 | INFO     | preparing for final server update for job 6971651292 in state='finished'
[2026-01-15 13:57:55] 2026-01-15 18:57:15,547 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,547 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6971651292/jobReport.json
[2026-01-15 13:57:55] 2026-01-15 18:57:15,549 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-15 13:57:55] 2026-01-15 18:57:15,550 | INFO     | this job has now completed (state=finished)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,550 | INFO     | log transfer has been attempted: DONE
[2026-01-15 13:57:55] 2026-01-15 18:57:15,550 | INFO     | job 6971651292 has finished - writing final server update
[2026-01-15 13:57:55] 2026-01-15 18:57:15,550 | INFO     | total number of processed events: 50 (read)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,552 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6971651292/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,553 | INFO     | extracted standard info from prmon json
[2026-01-15 13:57:55] 2026-01-15 18:57:15,553 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 13:57:55] 2026-01-15 18:57:15,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 13:57:55] 2026-01-15 18:57:15,554 | INFO     | fitting pss+swap vs Time
[2026-01-15 13:57:55] 2026-01-15 18:57:15,554 | INFO     | sum of square deviations: 5444161.884615384
[2026-01-15 13:57:55] 2026-01-15 18:57:15,554 | INFO     | sum of deviations: -1729824246.8461537
[2026-01-15 13:57:55] 2026-01-15 18:57:15,554 | INFO     | mean x: 1768502519.6538463
[2026-01-15 13:57:55] 2026-01-15 18:57:15,554 | INFO     | mean y: 2966381.4615384615
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | intersect: 561925738691.1362
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | chi2: 0.3594078032073602
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | current memory leak: -317.74 B/s (using 26 data points, chi2=0.36)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | could have reported an average CPU frequency of 1695 MHz (5 samples)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | ..............................
[2026-01-15 13:57:55] 2026-01-15 18:57:15,555 | INFO     | . Timing measurements:
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . get job = 0 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . initial setup = 7 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . payload setup = 7 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . stage-in = 0 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . payload execution = 1980 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . stage-out = 0 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | . log creation = 0 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,556 | INFO     | ..............................
[2026-01-15 13:57:55] 2026-01-15 18:57:15,816 | INFO     | 
[2026-01-15 13:57:55] 2026-01-15 18:57:15,816 | INFO     | job summary report
[2026-01-15 13:57:55] 2026-01-15 18:57:15,820 | INFO     | --------------------------------------------------
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | PanDA job id: 6971651292
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | task id: 47962010
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | errors: (none)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | pilot state: finished 
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | transexitcode: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:15,821 | INFO     | exeerrorcode: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | exeerrordiag: 
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | exitcode: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | exitmsg: OK
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | cpuconsumptiontime: 17985 s
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | nevents: 50
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | neventsw: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:15,822 | INFO     | pid: 19268
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | pgrp: 19268
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | corecount: 12
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | event service: False
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | sizes: {0: 2284832, 11: 2284832, 1992: 2310642, 1993: 2319636, 1997: 2319970}
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | --------------------------------------------------
[2026-01-15 13:57:55] 2026-01-15 18:57:15,823 | INFO     | 
[2026-01-15 13:57:55] 2026-01-15 18:57:15,824 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 13:57:55] 2026-01-15 18:57:15,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,848 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 13:57:55] 2026-01-15 18:57:15,851 | INFO     | job 6971651292 has completed (purged errors)
[2026-01-15 13:57:55] 2026-01-15 18:57:15,851 | INFO     | overall cleanup function is called
[2026-01-15 13:57:55] 2026-01-15 18:57:16,866 | INFO     | --- collectZombieJob: --- 10, [19268]
[2026-01-15 13:57:55] 2026-01-15 18:57:16,866 | INFO     | zombie collector waiting for pid 19268
[2026-01-15 13:57:55] 2026-01-15 18:57:16,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 13:57:55] 2026-01-15 18:57:16,866 | INFO     | collected zombie processes
[2026-01-15 13:57:55] 2026-01-15 18:57:16,866 | INFO     | will attempt to kill all subprocesses of pid=19268
[2026-01-15 13:57:55] 2026-01-15 18:57:16,956 | INFO     | process IDs to be killed: [19268] (in reverse order)
[2026-01-15 13:57:55] 2026-01-15 18:57:17,006 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 13:57:55] 2026-01-15 18:57:17,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 13:57:55] 2026-01-15 18:57:17,009 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-15 13:57:55] 2026-01-15 18:57:17,011 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-15 13:57:55] 2026-01-15 18:57:17,011 | INFO     | ready for new job
[2026-01-15 13:57:55] 2026-01-15 18:57:17,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 13:57:55] 2026-01-15 18:57:17,012 | INFO     | **************************************
[2026-01-15 13:57:55] 2026-01-15 18:57:17,012 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-15 13:57:55] 2026-01-15 18:57:17,013 | INFO     | **************************************
[2026-01-15 13:57:55] 2026-01-15 18:57:17,013 | INFO     | 
[2026-01-15 13:57:55] 2026-01-15 18:57:17,013 | INFO     | architecture information:
[2026-01-15 13:57:55] 2026-01-15 18:57:17,014 | INFO     | executing command: cat /etc/os-release
[2026-01-15 13:57:55] 2026-01-15 18:57:17,030 | INFO     | cat /etc/os-release:
[2026-01-15 13:57:55] NAME="CentOS Linux"
[2026-01-15 13:57:55] VERSION="7 (Core)"
[2026-01-15 13:57:55] ID="centos"
[2026-01-15 13:57:55] ID_LIKE="rhel fedora"
[2026-01-15 13:57:55] VERSION_ID="7"
[2026-01-15 13:57:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 13:57:55] ANSI_COLOR="0;31"
[2026-01-15 13:57:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 13:57:55] HOME_URL="https://www.centos.org/"
[2026-01-15 13:57:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 13:57:55] 
[2026-01-15 13:57:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 13:57:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 13:57:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 13:57:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 13:57:55] 
[2026-01-15 13:57:55] 2026-01-15 18:57:17,030 | INFO     | **************************************
[2026-01-15 13:57:55] 2026-01-15 18:57:17,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 13:57:55] 2026-01-15 18:57:17,548 | INFO     | sufficient remaining disk space (29150412800 B)
[2026-01-15 13:57:55] 2026-01-15 18:57:17,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 13:57:55] 2026-01-15 18:57:17,549 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 13:57:55] 2026-01-15 18:57:17,549 | INFO     | update_server=False
[2026-01-15 13:57:55] 2026-01-15 18:57:17,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 13:57:55] 2026-01-15 18:57:17,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 13:57:55] 2026-01-15 18:57:17,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:57:55] 2026-01-15 18:57:17,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 13:57:55] 2026-01-15 18:57:17,725 | INFO     | all payload control threads have been joined
[2026-01-15 13:57:55] 2026-01-15 18:57:18,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:57:55] 2026-01-15 18:57:18,085 | INFO     | aborting loop
[2026-01-15 13:57:55] 2026-01-15 18:57:18,202 | INFO     | all job control threads have been joined
[2026-01-15 13:57:55] 2026-01-15 18:57:18,293 | INFO     | all data control threads have been joined
[2026-01-15 13:57:55] 2026-01-15 18:57:18,554 | INFO     | [job] retrieve thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:18,555 | INFO     | [job] queue monitor thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:18,558 | INFO     | [payload] validate_post thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:18,686 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:18,730 | INFO     | [payload] control thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:18,826 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,090 | INFO     | [job] job monitor thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,135 | INFO     | [data] copytool_in thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,207 | INFO     | [job] control thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,299 | INFO     | [data] control thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,508 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,555 | INFO     | [data] copytool_out thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,629 | INFO     | [payload] failed_post thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:19,801 | INFO     | [job] validate thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:21,556 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:27,953 | INFO     | job.realtimelogging is not enabled
[2026-01-15 13:57:55] 2026-01-15 18:57:28,956 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 13:57:55] 2026-01-15 18:57:48,480 | INFO     | PID=14832 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 13:57:55] 2026-01-15 18:57:48,481 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 13:57:55] 2026-01-15 18:57:48,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 13:57:55] 2026-01-15 18:57:48,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 13:57:55] 2026-01-15 18:57:49,982 | INFO     | [monitor] cgroup control has ended
[2026-01-15 13:57:55] 2026-01-15 18:57:50,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993470703424)>', '<ExcThread(monitor, started 139992881936128)>']
[2026-01-15 13:57:55] 2026-01-15 18:57:50,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 13:57:55] 2026-01-15 18:57:50,485 | INFO     | [monitor] control thread has ended
[2026-01-15 13:57:55] 2026-01-15 18:57:55,282 | INFO     | all workflow threads have been joined
[2026-01-15 13:57:55] 2026-01-15 18:57:55,287 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 13:57:55] 2026-01-15 18:57:55,287 | INFO     | traces error code: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:55,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 13:57:55] 2026-01-15 18:57:55,373 [wrapper] ==== pilot stdout END ====
[2026-01-15 13:57:55] 2026-01-15 18:57:55,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 13:57:55] 2026-01-15 18:57:55,380 [wrapper] pilotpid: 14832
[2026-01-15 13:57:55] 2026-01-15 18:57:55,384 [wrapper] Pilot exit status: 0
[2026-01-15 13:57:55] 2026-01-15 18:57:55,399 [wrapper] pandaids: 6971651292
[2026-01-15 13:57:55] 2026-01-15 18:57:55,438 [wrapper] cleanup supervisor_pilot 30932 14833
[2026-01-15 13:57:55] 2026-01-15 18:57:55,442 [wrapper] Test setup, not cleaning
[2026-01-15 13:57:55] 2026-01-15 18:57:55,446 [wrapper] apfmon messages muted
[2026-01-15 13:57:55] 2026-01-15 18:57:55,450 [wrapper] ==== wrapper stdout END ====
[2026-01-15 13:57:55] 2026-01-15 18:57:55,454 [wrapper] ==== wrapper stderr END ====
[2026-01-15 13:57:55]  *** Error codes and diagnostics ***
[2026-01-15 13:57:55]     "exeErrorCode": 0,
[2026-01-15 13:57:55]     "exeErrorDiag": "",
[2026-01-15 13:57:55]     "pilotErrorCode": 0,
[2026-01-15 13:57:55]     "pilotErrorDiag": "",
[2026-01-15 13:57:55]  *** Listing of results directory ***
[2026-01-15 13:57:55] total 432348
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas    584422 Jan 15 13:00 pilot3.tar.gz
[2026-01-15 13:57:55] -rwx------ 1 boincer umatlas     36322 Jan 15 13:22 runpilot2-wrapper.sh
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas      5111 Jan 15 13:22 queuedata.json
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas       100 Jan 15 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 13:57:55] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 13:23 run_atlas
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas       105 Jan 15 13:23 job.xml
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas 392231449 Jan 15 13:23 EVNT.47962006._000115.pool.root.1
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 13:23 start_atlas.sh
[2026-01-15 13:57:55] drwxrwx--x 2 boincer umatlas      4096 Jan 15 13:23 shared
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas    597976 Jan 15 13:23 input.tar.gz
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas         0 Jan 15 13:23 boinc_lockfile
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas      2890 Jan 15 13:23 pandaJob.out
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas        57 Jan 15 13:23 setup.sh.local
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas   1004083 Jan 15 13:23 agis_schedconf.cvmfs.json
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas   1516246 Jan 15 13:23 agis_ddmendpoints.agis.ALL.json
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas       444 Jan 15 13:23 workernode_map.json
[2026-01-15 13:57:55] drwx------ 5 boincer umatlas      4096 Jan 15 13:23 pilot3
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas       529 Jan 15 13:50 boinc_task_state.xml
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas      5952 Jan 15 13:56 init_data.xml
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas  42717326 Jan 15 13:56 HITS.47962010._003556.pool.root.1
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas        95 Jan 15 13:57 pilot_heartbeat.json
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas      1047 Jan 15 13:57 memory_monitor_summary.json
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas   1587785 Jan 15 13:57 log.47962010._003556.job.log.tgz.1
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas      6968 Jan 15 13:57 heartbeat.json
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas        27 Jan 15 13:57 wrapper_checkpoint.txt
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 13:57 boinc_mmap_file
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas      4814 Jan 15 13:57 pilotlog.txt
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas    331041 Jan 15 13:57 log.47962010._003556.job.log.1
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas       353 Jan 15 13:57 output.list
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas       620 Jan 15 13:57 runtime_log
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas   1935360 Jan 15 13:57 result.tar.gz
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas      9338 Jan 15 13:57 runtime_log.err
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas       658 Jan 15 13:57 LcQLDmZAh08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBBvKDm8Z2Pxn.diag
[2026-01-15 13:57:55] -rw-r--r-- 1 boincer umatlas     21314 Jan 15 13:57 stderr.txt
[2026-01-15 13:57:55] HITS file was successfully produced:
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas 42717326 Jan 15 13:56 shared/HITS.pool.root.1
[2026-01-15 13:57:55]  *** Contents of shared directory: ***
[2026-01-15 13:57:55] total 427252
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas 392231449 Jan 15 13:23 ATLAS.root_0
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 13:23 start_atlas.sh
[2026-01-15 13:57:55] -rw-r--r-- 2 boincer umatlas    597976 Jan 15 13:23 input.tar.gz
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas  42717326 Jan 15 13:56 HITS.pool.root.1
[2026-01-15 13:57:55] -rw------- 1 boincer umatlas   1935360 Jan 15 13:57 result.tar.gz
13:57:56 (11140): run_atlas exited; CPU time 17666.314105
13:57:56 (11140): called boinc_finish(0)

</stderr_txt>
]]>

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