Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:29 (1336986): wrapper (7.7.26015): starting
12:28:29 (1336986): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 12:28:29] Arguments: --nthreads 8
[2026-01-15 12:28:29] Threads: 8
[2026-01-15 12:28:29] Checking for CVMFS
[2026-01-15 12:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 12:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 12:28:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 12:28:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 12:28:30] 2.13.3.0 7385 102287 217964 155180 2 310 26436934 32503808 23277 16776704 0 1198542927 99.604 1255691574 49201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 12:28:30] CVMFS is ok
[2026-01-15 12:28:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 12:28:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 12:28:30] Further information can be found at the LHC@home message board.
[2026-01-15 12:28:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 12:28:30] Checking for apptainer binary...
[2026-01-15 12:28:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 12:28:30] Running /usr/bin/apptainer --version
[2026-01-15 12:28:30] apptainer version 1.4.5-2.el9
[2026-01-15 12:28:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 12:28:30] c8-7-1.aglt2.org
[2026-01-15 12:28:30] apptainer works
[2026-01-15 12:28:30] Set ATHENA_PROC_NUMBER=8
[2026-01-15 12:28:30] Set ATHENA_CORE_NUMBER=8
[2026-01-15 12:28:30] Starting ATLAS job with PandaID=6970458433
[2026-01-15 12:28:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 14:02:59]  *** The last 200 lines of the pilot log: ***
[2026-01-15 14:02:59] 2026-01-15 19:01:50,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:01:50,842 | INFO     | job 6970458433 has state=finished
[2026-01-15 14:02:59] 2026-01-15 19:01:50,842 | INFO     | preparing for final server update for job 6970458433 in state='finished'
[2026-01-15 14:02:59] 2026-01-15 19:01:50,843 | INFO     | this job has now completed (state=finished)
[2026-01-15 14:02:59] 2026-01-15 19:01:50,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 14:02:59] 2026-01-15 19:01:50,843 | INFO     | log transfer has been attempted: DONE
[2026-01-15 14:02:59] 2026-01-15 19:01:50,843 | INFO     | job 6970458433 has finished - writing final server update
[2026-01-15 14:02:59] 2026-01-15 19:01:50,843 | INFO     | total number of processed events: 400 (read)
[2026-01-15 14:02:59] 2026-01-15 19:01:50,844 | INFO     | executing command: lscpu
[2026-01-15 14:02:59] 2026-01-15 19:01:50,931 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 14:02:59] 2026-01-15 19:01:51,949 | INFO     | time since job start (5589s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:01:52,770 | INFO     | monitor loop #349: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:01:52,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:01:53,955 | INFO     | time since job start (5591s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:01:55,276 | INFO     | monitor loop #350: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:01:55,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:01:55,962 | INFO     | time since job start (5593s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:01:57,782 | INFO     | monitor loop #351: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:01:57,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:01:57,970 | INFO     | time since job start (5595s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:00,287 | INFO     | monitor loop #352: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:02:00,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:02:00,308 | INFO     | PID=1346637 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 14:02:59] 2026-01-15 19:02:00,308 | INFO     | .. there are 25 such processes running
[2026-01-15 14:02:59] 2026-01-15 19:02:01,309 | INFO     | time since job start (5599s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:02,793 | INFO     | monitor loop #353: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:02:02,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:02:03,316 | INFO     | time since job start (5601s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:05,300 | INFO     | monitor loop #354: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:02:05,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:02:05,324 | INFO     | time since job start (5603s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:07,331 | INFO     | time since job start (5605s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:07,808 | INFO     | monitor loop #355: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:02:07,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:02:09,338 | INFO     | time since job start (5607s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:10,316 | INFO     | monitor loop #356: job 0:6970458433 is in state 'finished'
[2026-01-15 14:02:59] 2026-01-15 19:02:10,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:02:59] 2026-01-15 19:02:11,345 | INFO     | time since job start (5609s) is within the limit (349056.0s)
[2026-01-15 14:02:59] 2026-01-15 19:02:11,846 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 14:02:59] 2026-01-15 19:02:11,856 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3222.681773437499
[2026-01-15 14:02:59] 2026-01-15 19:02:11,889 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6970458433/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:02:59] 2026-01-15 19:02:11,890 | INFO     | extracted standard info from prmon json
[2026-01-15 14:02:59] 2026-01-15 19:02:11,890 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 14:02:59] 2026-01-15 19:02:11,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 14:02:59] 2026-01-15 19:02:11,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 14:02:59] 2026-01-15 19:02:11,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | fitting pss+swap vs Time
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | sum of square deviations: 190403570.0
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | sum of deviations: -3980074747.0
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | mean x: 1768501017.0
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | mean y: 2562160.8
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | intersect: 36970179090.49054
[2026-01-15 14:02:59] 2026-01-15 19:02:11,896 | INFO     | chi2: 0.007533134164174248
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | current memory leak: -20.90 B/s (using 85 data points, chi2=0.01)
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | could have reported an average CPU frequency of 3427 MHz (7 samples)
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | ..............................
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . Timing measurements:
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . get job = 0 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . initial setup = 2 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . payload setup = 6 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . stage-in = 0 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . payload execution = 5559 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . stage-out = 2 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | . log creation = 0 s
[2026-01-15 14:02:59] 2026-01-15 19:02:11,897 | INFO     | ..............................
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | 
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | job summary report
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | --------------------------------------------------
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | PanDA job id: 6970458433
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | task id: 48215263
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | errors: (none)
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | pilot state: finished 
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | transexitcode: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | exeerrorcode: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | exeerrordiag: 
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | exitcode: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | exitmsg: OK
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | cpuconsumptiontime: 17229 s
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | nevents: 400
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | neventsw: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:12,037 | INFO     | pid: 1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | pgrp: 1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | corecount: 8
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | event service: False
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | sizes: {0: 2283952, 5: 2284214, 11: 2284270, 5567: 2311028, 5569: 2320026, 5570: 2320082, 5593: 2320404}
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | --------------------------------------------------
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | 
[2026-01-15 14:02:59] 2026-01-15 19:02:12,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | job 6970458433 has completed (purged errors)
[2026-01-15 14:02:59] 2026-01-15 19:02:12,079 | INFO     | overall cleanup function is called
[2026-01-15 14:02:59] 2026-01-15 19:02:13,088 | INFO     | --- collectZombieJob: --- 10, [1362885]
[2026-01-15 14:02:59] 2026-01-15 19:02:13,088 | INFO     | zombie collector waiting for pid 1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:13,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 14:02:59] 2026-01-15 19:02:13,088 | INFO     | collected zombie processes
[2026-01-15 14:02:59] 2026-01-15 19:02:13,088 | INFO     | will attempt to kill all subprocesses of pid=1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:13,801 | INFO     | process IDs to be killed: [1362885] (in reverse order)
[2026-01-15 14:02:59] 2026-01-15 19:02:14,109 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 14:02:59] 2026-01-15 19:02:14,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 14:02:59] 2026-01-15 19:02:14,144 | INFO     | did not find any defunct processes belonging to 1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:14,192 | INFO     | did not find any defunct processes belonging to 1362885
[2026-01-15 14:02:59] 2026-01-15 19:02:14,193 | INFO     | ready for new job
[2026-01-15 14:02:59] 2026-01-15 19:02:14,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 14:02:59] 2026-01-15 19:02:14,194 | INFO     | ***************************************
[2026-01-15 14:02:59] 2026-01-15 19:02:14,194 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 14:02:59] 2026-01-15 19:02:14,194 | INFO     | ***************************************
[2026-01-15 14:02:59] 2026-01-15 19:02:14,194 | INFO     | 
[2026-01-15 14:02:59] 2026-01-15 19:02:14,200 | INFO     | architecture information:
[2026-01-15 14:02:59] 2026-01-15 19:02:14,201 | INFO     | executing command: cat /etc/os-release
[2026-01-15 14:02:59] 2026-01-15 19:02:14,254 | INFO     | cat /etc/os-release:
[2026-01-15 14:02:59] NAME="CentOS Linux"
[2026-01-15 14:02:59] VERSION="7 (Core)"
[2026-01-15 14:02:59] ID="centos"
[2026-01-15 14:02:59] ID_LIKE="rhel fedora"
[2026-01-15 14:02:59] VERSION_ID="7"
[2026-01-15 14:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 14:02:59] ANSI_COLOR="0;31"
[2026-01-15 14:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 14:02:59] HOME_URL="https://www.centos.org/"
[2026-01-15 14:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 14:02:59] 
[2026-01-15 14:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 14:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 14:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 14:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 14:02:59] 
[2026-01-15 14:02:59] 2026-01-15 19:02:14,254 | INFO     | ***************************************
[2026-01-15 14:02:59] 2026-01-15 19:02:14,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 14:02:59] 2026-01-15 19:02:14,820 | INFO     | sufficient remaining disk space (90518323200 B)
[2026-01-15 14:02:59] 2026-01-15 19:02:14,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 14:02:59] 2026-01-15 19:02:14,821 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 14:02:59] 2026-01-15 19:02:14,822 | INFO     | update_server=False
[2026-01-15 14:02:59] 2026-01-15 19:02:14,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 14:02:59] 2026-01-15 19:02:14,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:02:59] 2026-01-15 19:02:14,823 | INFO     | aborting loop
[2026-01-15 14:02:59] 2026-01-15 19:02:15,162 | INFO     | all payload control threads have been joined
[2026-01-15 14:02:59] 2026-01-15 19:02:15,307 | INFO     | all job control threads have been joined
[2026-01-15 14:02:59] 2026-01-15 19:02:15,785 | INFO     | all data control threads have been joined
[2026-01-15 14:02:59] 2026-01-15 19:02:15,828 | INFO     | [job] retrieve thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:15,833 | INFO     | [job] job monitor thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 14:02:59] 2026-01-15 19:02:16,155 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,168 | INFO     | [payload] control thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,313 | INFO     | [job] control thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,354 | INFO     | [data] copytool_in thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,466 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,791 | INFO     | [data] control thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:16,849 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:17,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:02:59] 2026-01-15 19:02:17,092 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:17,118 | INFO     | [job] validate thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:17,277 | INFO     | [payload] failed_post thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:17,280 | INFO     | [payload] validate_post thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:17,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 14:02:59] 2026-01-15 19:02:18,065 | INFO     | [job] queue monitor thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:18,094 | INFO     | [data] copytool_out thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:21,428 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 14:02:59] 2026-01-15 19:02:45,340 | INFO     | PID=1346637 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 14:02:59] 2026-01-15 19:02:45,340 | INFO     | .. there are 25 such processes running
[2026-01-15 14:02:59] 2026-01-15 19:02:45,341 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 14:02:59] 2026-01-15 19:02:45,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 14:02:59] 2026-01-15 19:02:45,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 14:02:59] 2026-01-15 19:02:51,955 | INFO     | [monitor] cgroup control has ended
[2026-01-15 14:02:59] 2026-01-15 19:02:52,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963710428992)>', '<ExcThread(monitor, started 139962850735872)>']
[2026-01-15 14:02:59] 2026-01-15 19:02:53,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 14:02:59] 2026-01-15 19:02:53,406 | INFO     | [monitor] control thread has ended
[2026-01-15 14:02:59] 2026-01-15 19:02:57,987 | INFO     | all workflow threads have been joined
[2026-01-15 14:02:59] 2026-01-15 19:02:57,987 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 14:02:59] 2026-01-15 19:02:57,987 | INFO     | traces error code: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:57,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 14:02:59] 2026-01-15 19:02:58,203 [wrapper] ==== pilot stdout END ====
[2026-01-15 14:02:59] 2026-01-15 19:02:58,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 14:02:59] 2026-01-15 19:02:58,238 [wrapper] pilotpid: 1346637
[2026-01-15 14:02:59] 2026-01-15 19:02:58,253 [wrapper] Pilot exit status: 0
[2026-01-15 14:02:59] 2026-01-15 19:02:58,357 [wrapper] pandaids: 6970458433
[2026-01-15 14:02:59] 2026-01-15 19:02:58,552 [wrapper] cleanup supervisor_pilot 2032080 1346638
[2026-01-15 14:02:59] 2026-01-15 19:02:58,570 [wrapper] Test setup, not cleaning
[2026-01-15 14:02:59] 2026-01-15 19:02:58,598 [wrapper] apfmon messages muted
[2026-01-15 14:02:59] 2026-01-15 19:02:58,615 [wrapper] ==== wrapper stdout END ====
[2026-01-15 14:02:59] 2026-01-15 19:02:58,636 [wrapper] ==== wrapper stderr END ====
[2026-01-15 14:02:59]  *** Error codes and diagnostics ***
[2026-01-15 14:02:59]     "exeErrorCode": 0,
[2026-01-15 14:02:59]     "exeErrorDiag": "",
[2026-01-15 14:02:59]     "pilotErrorCode": 0,
[2026-01-15 14:02:59]     "pilotErrorDiag": "",
[2026-01-15 14:02:59]  *** Listing of results directory ***
[2026-01-15 14:02:59] total 725780
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 14:02:59] -rwx------. 1 boincer umatlas     36322 Jan 15 03:37 runpilot2-wrapper.sh
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas       100 Jan 15 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 14:02:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 12:28 run_atlas
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas       105 Jan 15 12:28 job.xml
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas 593142357 Jan 15 12:28 EVNT.32794306._001928.pool.root.1
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 12:28 start_atlas.sh
[2026-01-15 14:02:59] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 12:28 shared
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 12:28 input.tar.gz
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas         0 Jan 15 12:28 boinc_lockfile
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 12:28 pandaJob.out
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas        57 Jan 15 12:28 setup.sh.local
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas   1004075 Jan 15 12:28 agis_schedconf.cvmfs.json
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas   1516246 Jan 15 12:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 14:02:59] drwx------. 5 boincer umatlas      4096 Jan 15 12:28 pilot3
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 13:57 init_data.xml
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas 143942269 Jan 15 14:01 HITS.48215263._049658.pool.root.1
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas       530 Jan 15 14:01 boinc_task_state.xml
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas      1048 Jan 15 14:01 memory_monitor_summary.json
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas    336048 Jan 15 14:01 log.48215263._049658.job.log.tgz.1
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas      7797 Jan 15 14:02 heartbeat.json
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas        95 Jan 15 14:02 pilot_heartbeat.json
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 14:02 boinc_mmap_file
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas        27 Jan 15 14:02 wrapper_checkpoint.txt
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas      4824 Jan 15 14:02 pilotlog.txt
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas    752390 Jan 15 14:02 log.48215263._049658.job.log.1
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas       357 Jan 15 14:02 output.list
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas       620 Jan 15 14:02 runtime_log
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas   1105920 Jan 15 14:02 result.tar.gz
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 14:02 runtime_log.err
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas       654 Jan 15 14:02 ObkLDmk2X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5quKDmaWzgYn.diag
[2026-01-15 14:02:59] -rw-r--r--. 1 boincer umatlas     22332 Jan 15 14:02 stderr.txt
[2026-01-15 14:02:59] HITS file was successfully produced:
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas 143942269 Jan 15 14:01 shared/HITS.pool.root.1
[2026-01-15 14:02:59]  *** Contents of shared directory: ***
[2026-01-15 14:02:59] total 721500
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas 593142357 Jan 15 12:28 ATLAS.root_0
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 12:28 start_atlas.sh
[2026-01-15 14:02:59] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 12:28 input.tar.gz
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas 143942269 Jan 15 14:01 HITS.pool.root.1
[2026-01-15 14:02:59] -rw-------. 1 boincer umatlas   1105920 Jan 15 14:02 result.tar.gz
14:03:00 (1336986): run_atlas exited; CPU time 17393.107314
14:03:00 (1336986): called boinc_finish(0)

</stderr_txt>
]]>

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