Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:46 (1313277): wrapper (7.7.26015): starting
12:27:46 (1313277): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 12:27:46] Arguments: --nthreads 8
[2026-01-15 12:27:46] Threads: 8
[2026-01-15 12:27:46] Checking for CVMFS
[2026-01-15 12:27:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 12:27:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 12:27:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 12:27:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 12:27:47] 2.13.3.0 7385 102286 217964 155180 3 288 26436818 32503808 23054 16776704 0 1198484794 99.604 1255691547 49201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 12:27:47] CVMFS is ok
[2026-01-15 12:27:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 12:27:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 12:27:47] Further information can be found at the LHC@home message board.
[2026-01-15 12:27:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 12:27:47] Checking for apptainer binary...
[2026-01-15 12:27:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 12:27:47] Running /usr/bin/apptainer --version
[2026-01-15 12:27:47] apptainer version 1.4.5-2.el9
[2026-01-15 12:27:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 12:27:47] c8-7-1.aglt2.org
[2026-01-15 12:27:47] apptainer works
[2026-01-15 12:27:47] Set ATHENA_PROC_NUMBER=8
[2026-01-15 12:27:47] Set ATHENA_CORE_NUMBER=8
[2026-01-15 12:27:47] Starting ATLAS job with PandaID=6970896239
[2026-01-15 12:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 14:03:29]  *** The last 200 lines of the pilot log: ***
[2026-01-15 14:03:29] 2026-01-15 19:01:54,806 | INFO     | job 6970896239 has state=finished
[2026-01-15 14:03:29] 2026-01-15 19:01:54,806 | INFO     | preparing for final server update for job 6970896239 in state='finished'
[2026-01-15 14:03:29] 2026-01-15 19:01:54,808 | INFO     | this job has now completed (state=finished)
[2026-01-15 14:03:29] 2026-01-15 19:01:54,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 14:03:29] 2026-01-15 19:01:54,808 | INFO     | log transfer has been attempted: DONE
[2026-01-15 14:03:29] 2026-01-15 19:01:54,808 | INFO     | job 6970896239 has finished - writing final server update
[2026-01-15 14:03:29] 2026-01-15 19:01:54,808 | INFO     | total number of processed events: 400 (read)
[2026-01-15 14:03:29] 2026-01-15 19:01:54,809 | INFO     | executing command: lscpu
[2026-01-15 14:03:29] 2026-01-15 19:01:54,831 | INFO     | time since job start (5633s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:01:54,927 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 14:03:29] 2026-01-15 19:01:56,701 | INFO     | monitor loop #367: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:01:56,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:01:56,840 | INFO     | time since job start (5635s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:01:58,847 | INFO     | time since job start (5637s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:01:59,206 | INFO     | monitor loop #368: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:01:59,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:00,854 | INFO     | time since job start (5639s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:01,711 | INFO     | monitor loop #369: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:01,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:02,861 | INFO     | time since job start (5641s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:04,216 | INFO     | monitor loop #370: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:04,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:04,868 | INFO     | time since job start (5643s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:06,727 | INFO     | monitor loop #371: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:06,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:06,876 | INFO     | time since job start (5645s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:08,883 | INFO     | time since job start (5647s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:09,232 | INFO     | monitor loop #372: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:09,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:10,890 | INFO     | time since job start (5649s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:11,739 | INFO     | monitor loop #373: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:11,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:13,691 | INFO     | PID=1318049 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 14:03:29] 2026-01-15 19:02:13,691 | INFO     | .. there are 25 such processes running
[2026-01-15 14:03:29] 2026-01-15 19:02:14,244 | INFO     | monitor loop #374: job 0:6970896239 is in state 'finished'
[2026-01-15 14:03:29] 2026-01-15 19:02:14,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:03:29] 2026-01-15 19:02:14,692 | INFO     | time since job start (5653s) is within the limit (349056.0s)
[2026-01-15 14:03:29] 2026-01-15 19:02:15,784 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 14:03:29] 2026-01-15 19:02:15,790 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3281.701726562499
[2026-01-15 14:03:29] 2026-01-15 19:02:15,806 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970896239/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:03:29] 2026-01-15 19:02:15,807 | INFO     | extracted standard info from prmon json
[2026-01-15 14:03:29] 2026-01-15 19:02:15,808 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 14:03:29] 2026-01-15 19:02:15,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 14:03:29] 2026-01-15 19:02:15,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 14:03:29] 2026-01-15 19:02:15,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | fitting pss+swap vs Time
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | sum of square deviations: 190403570.0
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | sum of deviations: -1469434917.0
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | mean x: 1768500977.0
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | mean y: 2571734.0823529414
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | intersect: 13650934978.282103
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | chi2: 0.006211545441950356
[2026-01-15 14:03:29] 2026-01-15 19:02:15,810 | INFO     | current memory leak: -7.72 B/s (using 85 data points, chi2=0.01)
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | could have reported an average CPU frequency of 3423 MHz (7 samples)
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | ..............................
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . Timing measurements:
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . get job = 0 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . initial setup = 2 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . payload setup = 6 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . stage-in = 1 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . payload execution = 5603 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . stage-out = 1 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | . log creation = 0 s
[2026-01-15 14:03:29] 2026-01-15 19:02:15,811 | INFO     | ..............................
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | 
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | job summary report
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | --------------------------------------------------
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | PanDA job id: 6970896239
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | task id: 48215263
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | errors: (none)
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | pilot state: finished 
[2026-01-15 14:03:29] 2026-01-15 19:02:16,358 | INFO     | transexitcode: 0
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | exeerrorcode: 0
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | exeerrordiag: 
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | exitcode: 0
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | exitmsg: OK
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | cpuconsumptiontime: 17810 s
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | nevents: 400
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | neventsw: 0
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | pid: 1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | pgrp: 1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | corecount: 8
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | event service: False
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | sizes: {0: 2283902, 6: 2284164, 11: 2284192, 5614: 2310918, 5615: 2319972, 5639: 2320110}
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | --------------------------------------------------
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | 
[2026-01-15 14:03:29] 2026-01-15 19:02:16,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 14:03:29] 2026-01-15 19:02:16,550 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,550 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,550 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,550 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | job 6970896239 has completed (purged errors)
[2026-01-15 14:03:29] 2026-01-15 19:02:16,551 | INFO     | overall cleanup function is called
[2026-01-15 14:03:29] 2026-01-15 19:02:17,564 | INFO     | --- collectZombieJob: --- 10, [1330541]
[2026-01-15 14:03:29] 2026-01-15 19:02:17,564 | INFO     | zombie collector waiting for pid 1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:17,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 14:03:29] 2026-01-15 19:02:17,564 | INFO     | collected zombie processes
[2026-01-15 14:03:29] 2026-01-15 19:02:17,564 | INFO     | will attempt to kill all subprocesses of pid=1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:18,458 | INFO     | process IDs to be killed: [1330541] (in reverse order)
[2026-01-15 14:03:29] 2026-01-15 19:02:18,728 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 14:03:29] 2026-01-15 19:02:18,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 14:03:29] 2026-01-15 19:02:18,784 | INFO     | did not find any defunct processes belonging to 1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:18,845 | INFO     | did not find any defunct processes belonging to 1330541
[2026-01-15 14:03:29] 2026-01-15 19:02:18,846 | INFO     | ready for new job
[2026-01-15 14:03:29] 2026-01-15 19:02:18,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 14:03:29] 2026-01-15 19:02:18,852 | INFO     | ***************************************
[2026-01-15 14:03:29] 2026-01-15 19:02:18,852 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 14:03:29] 2026-01-15 19:02:18,852 | INFO     | ***************************************
[2026-01-15 14:03:29] 2026-01-15 19:02:18,852 | INFO     | 
[2026-01-15 14:03:29] 2026-01-15 19:02:18,863 | INFO     | architecture information:
[2026-01-15 14:03:29] 2026-01-15 19:02:18,867 | INFO     | executing command: cat /etc/os-release
[2026-01-15 14:03:29] 2026-01-15 19:02:18,943 | INFO     | cat /etc/os-release:
[2026-01-15 14:03:29] NAME="CentOS Linux"
[2026-01-15 14:03:29] VERSION="7 (Core)"
[2026-01-15 14:03:29] ID="centos"
[2026-01-15 14:03:29] ID_LIKE="rhel fedora"
[2026-01-15 14:03:29] VERSION_ID="7"
[2026-01-15 14:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 14:03:29] ANSI_COLOR="0;31"
[2026-01-15 14:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 14:03:29] HOME_URL="https://www.centos.org/"
[2026-01-15 14:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 14:03:29] 
[2026-01-15 14:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 14:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 14:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 14:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 14:03:29] 
[2026-01-15 14:03:29] 2026-01-15 19:02:18,946 | INFO     | ***************************************
[2026-01-15 14:03:29] 2026-01-15 19:02:19,448 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 14:03:29] 2026-01-15 19:02:19,512 | INFO     | sufficient remaining disk space (90523566080 B)
[2026-01-15 14:03:29] 2026-01-15 19:02:19,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 14:03:29] 2026-01-15 19:02:19,513 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 14:03:29] 2026-01-15 19:02:19,513 | INFO     | update_server=False
[2026-01-15 14:03:29] 2026-01-15 19:02:19,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 14:03:29] 2026-01-15 19:02:19,731 | INFO     | all data control threads have been joined
[2026-01-15 14:03:29] 2026-01-15 19:02:20,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 14:03:29] 2026-01-15 19:02:20,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:03:29] 2026-01-15 19:02:20,265 | INFO     | aborting loop
[2026-01-15 14:03:29] 2026-01-15 19:02:20,519 | INFO     | [job] retrieve thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:20,587 | INFO     | all payload control threads have been joined
[2026-01-15 14:03:29] 2026-01-15 19:02:20,597 | INFO     | all job control threads have been joined
[2026-01-15 14:03:29] 2026-01-15 19:02:20,660 | INFO     | [job] validate thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:20,737 | INFO     | [data] control thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:20,753 | INFO     | [payload] validate_post thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:20,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 14:03:29] 2026-01-15 19:02:20,862 | INFO     | [payload] failed_post thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:20,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:03:29] 2026-01-15 19:02:20,988 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,271 | INFO     | [job] job monitor thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,421 | INFO     | [data] copytool_in thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,593 | INFO     | [payload] control thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,603 | INFO     | [job] control thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,650 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,911 | INFO     | [job] queue monitor thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:21,919 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:22,141 | INFO     | [data] copytool_out thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:24,804 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:29,597 | INFO     | job.realtimelogging is not enabled
[2026-01-15 14:03:29] 2026-01-15 19:02:30,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 14:03:29] 2026-01-15 19:02:48,752 | INFO     | PID=1318049 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 14:03:29] 2026-01-15 19:02:48,752 | INFO     | .. there are 25 such processes running
[2026-01-15 14:03:29] 2026-01-15 19:02:48,776 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 14:03:29] 2026-01-15 19:02:48,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 14:03:29] 2026-01-15 19:02:48,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 14:03:29] 2026-01-15 19:03:10,818 | INFO     | [monitor] cgroup control has ended
[2026-01-15 14:03:29] 2026-01-15 19:03:11,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390328964928)>', '<ExcThread(monitor, started 140389461784320)>']
[2026-01-15 14:03:29] 2026-01-15 19:03:11,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 14:03:29] 2026-01-15 19:03:11,931 | INFO     | [monitor] control thread has ended
[2026-01-15 14:03:29] 2026-01-15 19:03:16,142 | INFO     | all workflow threads have been joined
[2026-01-15 14:03:29] 2026-01-15 19:03:16,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 14:03:29] 2026-01-15 19:03:16,142 | INFO     | traces error code: 0
[2026-01-15 14:03:29] 2026-01-15 19:03:16,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 14:03:29] 2026-01-15 19:03:16,919 [wrapper] ==== pilot stdout END ====
[2026-01-15 14:03:29] 2026-01-15 19:03:16,928 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 14:03:29] 2026-01-15 19:03:16,967 [wrapper] pilotpid: 1318049
[2026-01-15 14:03:29] 2026-01-15 19:03:16,982 [wrapper] Pilot exit status: 0
[2026-01-15 14:03:29] 2026-01-15 19:03:17,062 [wrapper] pandaids: 6970896239
[2026-01-15 14:03:29] 2026-01-15 19:03:17,239 [wrapper] cleanup supervisor_pilot 2029706 1318050
[2026-01-15 14:03:29] 2026-01-15 19:03:17,243 [wrapper] Test setup, not cleaning
[2026-01-15 14:03:29] 2026-01-15 19:03:17,251 [wrapper] apfmon messages muted
[2026-01-15 14:03:29] 2026-01-15 19:03:17,270 [wrapper] ==== wrapper stdout END ====
[2026-01-15 14:03:29] 2026-01-15 19:03:17,277 [wrapper] ==== wrapper stderr END ====
[2026-01-15 14:03:29]  *** Error codes and diagnostics ***
[2026-01-15 14:03:29]     "exeErrorCode": 0,
[2026-01-15 14:03:29]     "exeErrorDiag": "",
[2026-01-15 14:03:29]     "pilotErrorCode": 0,
[2026-01-15 14:03:29]     "pilotErrorDiag": "",
[2026-01-15 14:03:29]  *** Listing of results directory ***
[2026-01-15 14:03:29] total 732280
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 14:03:29] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas       100 Jan 15 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 14:03:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 12:27 run_atlas
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas       105 Jan 15 12:27 job.xml
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas 594456645 Jan 15 12:27 EVNT.32794306._001276.pool.root.1
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 12:27 start_atlas.sh
[2026-01-15 14:03:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 12:27 shared
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas    592411 Jan 15 12:27 input.tar.gz
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas         0 Jan 15 12:27 boinc_lockfile
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 12:27 pandaJob.out
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas        57 Jan 15 12:27 setup.sh.local
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas   1004075 Jan 15 12:27 agis_schedconf.cvmfs.json
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas   1516246 Jan 15 12:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 14:03:29] drwx------. 5 boincer umatlas      4096 Jan 15 12:28 pilot3
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas 149166158 Jan 15 14:01 HITS.48215263._051734.pool.root.1
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas       530 Jan 15 14:01 boinc_task_state.xml
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas      1060 Jan 15 14:01 memory_monitor_summary.json
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas    366846 Jan 15 14:01 log.48215263._051734.job.log.tgz.1
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas      7796 Jan 15 14:02 heartbeat.json
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas        95 Jan 15 14:02 pilot_heartbeat.json
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 14:03 init_data.xml
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas      4896 Jan 15 14:03 pilotlog.txt
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas    778845 Jan 15 14:03 log.48215263._051734.job.log.1
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas       357 Jan 15 14:03 output.list
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas       620 Jan 15 14:03 runtime_log
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas   1167360 Jan 15 14:03 result.tar.gz
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas       654 Jan 15 14:03 Wp0NDma1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnboKDm9XC5wm.diag
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 14:03 runtime_log.err
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas        27 Jan 15 14:03 wrapper_checkpoint.txt
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 14:03 boinc_mmap_file
[2026-01-15 14:03:29] -rw-r--r--. 1 boincer umatlas     22281 Jan 15 14:03 stderr.txt
[2026-01-15 14:03:29] HITS file was successfully produced:
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas 149166158 Jan 15 14:01 shared/HITS.pool.root.1
[2026-01-15 14:03:29]  *** Contents of shared directory: ***
[2026-01-15 14:03:29] total 727944
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas 594456645 Jan 15 12:27 ATLAS.root_0
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 12:27 start_atlas.sh
[2026-01-15 14:03:29] -rw-r--r--. 2 boincer umatlas    592411 Jan 15 12:27 input.tar.gz
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas 149166158 Jan 15 14:01 HITS.pool.root.1
[2026-01-15 14:03:29] -rw-------. 1 boincer umatlas   1167360 Jan 15 14:03 result.tar.gz
14:03:30 (1313277): run_atlas exited; CPU time 17965.783865
14:03:30 (1313277): called boinc_finish(0)

</stderr_txt>
]]>

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