Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:05:17 (18698): wrapper (7.7.26015): starting
12:05:17 (18698): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 12:05:17] Arguments: --nthreads 8
[2026-01-15 12:05:17] Threads: 8
[2026-01-15 12:05:17] Checking for CVMFS
[2026-01-15 12:05:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 12:05:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 12:05:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 12:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 12:05:17] 2.11.2.0 27562 406344 310832 155179 3 188 15920056 18432001 1833 130560 7 734355636 99.365 1130192503 26006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 12:05:17] CVMFS is ok
[2026-01-15 12:05:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 12:05:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 12:05:17] Further information can be found at the LHC@home message board.
[2026-01-15 12:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 12:05:17] Checking for apptainer binary...
[2026-01-15 12:05:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 12:05:17] Running /usr/bin/apptainer --version
[2026-01-15 12:05:17] apptainer version 1.3.2-1.el7
[2026-01-15 12:05:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 12:05:18] c-9-30.aglt2.org
[2026-01-15 12:05:18] apptainer works
[2026-01-15 12:05:18] Set ATHENA_PROC_NUMBER=8
[2026-01-15 12:05:18] Set ATHENA_CORE_NUMBER=8
[2026-01-15 12:05:18] Starting ATLAS job with PandaID=6971598497
[2026-01-15 12:05:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 13:08:52]  *** The last 200 lines of the pilot log: ***
[2026-01-15 13:08:52]  is_altstaged=None
[2026-01-15 13:08:52]  is_tar=False
[2026-01-15 13:08:52]  lfn=log.48215263._052332.job.log.tgz.1
[2026-01-15 13:08:52]  mtime=0
[2026-01-15 13:08:52]  protocol_id=None
[2026-01-15 13:08:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 13:08:52]  replicas=None
[2026-01-15 13:08:52]  scope=mc23_13p6TeV
[2026-01-15 13:08:52]  status=None
[2026-01-15 13:08:52]  status_code=0
[2026-01-15 13:08:52]  storage_token=
[2026-01-15 13:08:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6971598497/log.48215263._052332.job.log.tgz.1
[2026-01-15 13:08:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/5b/log.48215263._052332.job.log.tgz.1
[2026-01-15 13:08:52]  workdir=None
[2026-01-15 13:08:52] ]
[2026-01-15 13:08:52] 2026-01-15 18:08:15,299 | INFO     | transferring file log.48215263._052332.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6971598497/log.48215263._052332.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 13:08:52] 2026-01-15 18:08:15,300 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6971598497/log.48215263._052332.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._052332.job
[2026-01-15 13:08:52] 2026-01-15 18:08:15,316 | INFO     | adding to output.list: log.48215263._052332.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/5b/log.48215263._052332.job.log.tg
[2026-01-15 13:08:52] 2026-01-15 18:08:15,317 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 13:08:52] 2026-01-15 18:08:15,317 | INFO     | summary of transferred files:
[2026-01-15 13:08:52] 2026-01-15 18:08:15,317 | INFO     |  -- lfn=log.48215263._052332.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 13:08:52] 2026-01-15 18:08:15,317 | INFO     | stage-out finished correctly
[2026-01-15 13:08:52] 2026-01-15 18:08:15,479 | INFO     | monitor loop #287: job 0:6971598497 is in state 'finished'
[2026-01-15 13:08:52] 2026-01-15 18:08:15,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:08:52] 2026-01-15 18:08:15,514 | INFO     | PID=22399 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 13:08:52] 2026-01-15 18:08:16,515 | INFO     | time since job start (3764s) is within the limit (349056.0s)
[2026-01-15 13:08:52] 2026-01-15 18:08:17,983 | INFO     | monitor loop #288: job 0:6971598497 is in state 'finished'
[2026-01-15 13:08:52] 2026-01-15 18:08:17,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:08:52] 2026-01-15 18:08:18,521 | INFO     | time since job start (3766s) is within the limit (349056.0s)
[2026-01-15 13:08:52] 2026-01-15 18:08:18,521 | INFO     | 3772s have passed since pilot start - server update state is 'RUNNING'
[2026-01-15 13:08:52] 2026-01-15 18:08:18,690 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 13:08:52] 2026-01-15 18:08:19,475 | INFO     | job 6971598497 has state=finished
[2026-01-15 13:08:52] 2026-01-15 18:08:19,476 | INFO     | preparing for final server update for job 6971598497 in state='finished'
[2026-01-15 13:08:52] 2026-01-15 18:08:19,476 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6971598497/jobReport.json
[2026-01-15 13:08:52] 2026-01-15 18:08:19,480 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-15 13:08:52] 2026-01-15 18:08:19,481 | INFO     | this job has now completed (state=finished)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,481 | INFO     | log transfer has been attempted: DONE
[2026-01-15 13:08:52] 2026-01-15 18:08:19,481 | INFO     | job 6971598497 has finished - writing final server update
[2026-01-15 13:08:52] 2026-01-15 18:08:19,482 | INFO     | total number of processed events: 400 (read)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,490 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6971598497/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,491 | INFO     | extracted standard info from prmon json
[2026-01-15 13:08:52] 2026-01-15 18:08:19,491 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 13:08:52] 2026-01-15 18:08:19,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 13:08:52] 2026-01-15 18:08:19,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 13:08:52] 2026-01-15 18:08:19,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 13:08:52] 2026-01-15 18:08:19,495 | INFO     | fitting pss+swap vs Time
[2026-01-15 13:08:52] 2026-01-15 18:08:19,495 | INFO     | sum of square deviations: 51573060.0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,495 | INFO     | sum of deviations: 424794301.0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,496 | INFO     | mean x: 1768498704.0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,496 | INFO     | mean y: 2523979.7454545456
[2026-01-15 13:08:52] 2026-01-15 18:08:19,496 | INFO     | intersect: -14564154258.565126
[2026-01-15 13:08:52] 2026-01-15 18:08:19,496 | INFO     | chi2: 0.014996166219683103
[2026-01-15 13:08:52] 2026-01-15 18:08:19,497 | INFO     | current memory leak: 8.24 B/s (using 55 data points, chi2=0.01)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,497 | INFO     | could have reported an average CPU frequency of 2999 MHz (6 samples)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | ..............................
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | . Timing measurements:
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | . get job = 0 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | . initial setup = 5 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | . payload setup = 4 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,498 | INFO     | . stage-in = 0 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,499 | INFO     | . payload execution = 3742 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,499 | INFO     | . stage-out = 0 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,499 | INFO     | . log creation = 0 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,499 | INFO     | ..............................
[2026-01-15 13:08:52] 2026-01-15 18:08:19,592 | INFO     | 
[2026-01-15 13:08:52] 2026-01-15 18:08:19,593 | INFO     | job summary report
[2026-01-15 13:08:52] 2026-01-15 18:08:19,593 | INFO     | --------------------------------------------------
[2026-01-15 13:08:52] 2026-01-15 18:08:19,593 | INFO     | PanDA job id: 6971598497
[2026-01-15 13:08:52] 2026-01-15 18:08:19,593 | INFO     | task id: 48215263
[2026-01-15 13:08:52] 2026-01-15 18:08:19,593 | INFO     | errors: (none)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 13:08:52] 2026-01-15 18:08:19,594 | INFO     | pilot state: finished 
[2026-01-15 13:08:52] 2026-01-15 18:08:19,594 | INFO     | transexitcode: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,594 | INFO     | exeerrorcode: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,594 | INFO     | exeerrordiag: 
[2026-01-15 13:08:52] 2026-01-15 18:08:19,595 | INFO     | exitcode: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,595 | INFO     | exitmsg: OK
[2026-01-15 13:08:52] 2026-01-15 18:08:19,595 | INFO     | cpuconsumptiontime: 26929 s
[2026-01-15 13:08:52] 2026-01-15 18:08:19,595 | INFO     | nevents: 400
[2026-01-15 13:08:52] 2026-01-15 18:08:19,595 | INFO     | neventsw: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,596 | INFO     | pid: 27415
[2026-01-15 13:08:52] 2026-01-15 18:08:19,596 | INFO     | pgrp: 27415
[2026-01-15 13:08:52] 2026-01-15 18:08:19,596 | INFO     | corecount: 8
[2026-01-15 13:08:52] 2026-01-15 18:08:19,596 | INFO     | event service: False
[2026-01-15 13:08:52] 2026-01-15 18:08:19,597 | INFO     | sizes: {0: 2283785, 1: 2284189, 11: 2284189, 3751: 2310049, 3752: 2319047, 3755: 2319103, 3756: 2319425}
[2026-01-15 13:08:52] 2026-01-15 18:08:19,597 | INFO     | --------------------------------------------------
[2026-01-15 13:08:52] 2026-01-15 18:08:19,597 | INFO     | 
[2026-01-15 13:08:52] 2026-01-15 18:08:19,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 13:08:52] 2026-01-15 18:08:19,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,631 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 13:08:52] 2026-01-15 18:08:19,631 | INFO     | job 6971598497 has completed (purged errors)
[2026-01-15 13:08:52] 2026-01-15 18:08:19,631 | INFO     | overall cleanup function is called
[2026-01-15 13:08:52] 2026-01-15 18:08:20,640 | INFO     | --- collectZombieJob: --- 10, [27415]
[2026-01-15 13:08:52] 2026-01-15 18:08:20,640 | INFO     | zombie collector waiting for pid 27415
[2026-01-15 13:08:52] 2026-01-15 18:08:20,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 13:08:52] 2026-01-15 18:08:20,641 | INFO     | collected zombie processes
[2026-01-15 13:08:52] 2026-01-15 18:08:20,641 | INFO     | will attempt to kill all subprocesses of pid=27415
[2026-01-15 13:08:52] 2026-01-15 18:08:20,886 | INFO     | process IDs to be killed: [27415] (in reverse order)
[2026-01-15 13:08:52] 2026-01-15 18:08:20,961 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 13:08:52] 2026-01-15 18:08:20,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 13:08:52] 2026-01-15 18:08:20,968 | INFO     | did not find any defunct processes belonging to 27415
[2026-01-15 13:08:52] 2026-01-15 18:08:20,972 | INFO     | did not find any defunct processes belonging to 27415
[2026-01-15 13:08:52] 2026-01-15 18:08:20,973 | INFO     | ready for new job
[2026-01-15 13:08:52] 2026-01-15 18:08:20,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 13:08:52] 2026-01-15 18:08:20,974 | INFO     | **************************************
[2026-01-15 13:08:52] 2026-01-15 18:08:20,974 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-15 13:08:52] 2026-01-15 18:08:20,974 | INFO     | **************************************
[2026-01-15 13:08:52] 2026-01-15 18:08:20,975 | INFO     | 
[2026-01-15 13:08:52] 2026-01-15 18:08:20,976 | INFO     | architecture information:
[2026-01-15 13:08:52] 2026-01-15 18:08:20,977 | INFO     | executing command: cat /etc/os-release
[2026-01-15 13:08:52] 2026-01-15 18:08:20,990 | INFO     | cat /etc/os-release:
[2026-01-15 13:08:52] NAME="CentOS Linux"
[2026-01-15 13:08:52] VERSION="7 (Core)"
[2026-01-15 13:08:52] ID="centos"
[2026-01-15 13:08:52] ID_LIKE="rhel fedora"
[2026-01-15 13:08:52] VERSION_ID="7"
[2026-01-15 13:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 13:08:52] ANSI_COLOR="0;31"
[2026-01-15 13:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 13:08:52] HOME_URL="https://www.centos.org/"
[2026-01-15 13:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 13:08:52] 
[2026-01-15 13:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 13:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 13:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 13:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 13:08:52] 
[2026-01-15 13:08:52] 2026-01-15 18:08:20,990 | INFO     | **************************************
[2026-01-15 13:08:52] 2026-01-15 18:08:21,493 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 13:08:52] 2026-01-15 18:08:21,515 | INFO     | sufficient remaining disk space (105860038656 B)
[2026-01-15 13:08:52] 2026-01-15 18:08:21,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 13:08:52] 2026-01-15 18:08:21,516 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 13:08:52] 2026-01-15 18:08:21,516 | INFO     | update_server=False
[2026-01-15 13:08:52] 2026-01-15 18:08:21,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 13:08:52] 2026-01-15 18:08:21,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:08:52] 2026-01-15 18:08:21,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:08:52] 2026-01-15 18:08:21,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 13:08:52] 2026-01-15 18:08:21,518 | INFO     | aborting loop
[2026-01-15 13:08:52] 2026-01-15 18:08:22,096 | INFO     | all data control threads have been joined
[2026-01-15 13:08:52] 2026-01-15 18:08:22,104 | INFO     | all payload control threads have been joined
[2026-01-15 13:08:52] 2026-01-15 18:08:22,288 | INFO     | all job control threads have been joined
[2026-01-15 13:08:52] 2026-01-15 18:08:22,522 | INFO     | [job] retrieve thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:22,522 | INFO     | [job] queue monitor thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:22,524 | INFO     | [job] job monitor thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,060 | INFO     | [payload] validate_post thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,101 | INFO     | [data] control thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,109 | INFO     | [payload] control thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,135 | INFO     | [payload] failed_post thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,189 | INFO     | [job] validate thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,250 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,293 | INFO     | [job] control thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,524 | INFO     | [data] copytool_out thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,632 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,691 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,937 | INFO     | [data] copytool_in thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:23,950 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:24,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 13:08:52] 2026-01-15 18:08:28,797 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 13:08:52] 2026-01-15 18:08:36,677 | INFO     | [monitor] cgroup control has ended
[2026-01-15 13:08:52] 2026-01-15 18:08:38,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697393448768)>', '<ExcThread(monitor, started 140696660985600)>']
[2026-01-15 13:08:52] 2026-01-15 18:08:43,598 | INFO     | all workflow threads have been joined
[2026-01-15 13:08:52] 2026-01-15 18:08:43,598 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 13:08:52] 2026-01-15 18:08:43,599 | INFO     | traces error code: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:43,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 13:08:52] 2026-01-15 18:08:51,830 | INFO     | PID=22399 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 13:08:52] 2026-01-15 18:08:51,831 | INFO     | [monitor] control thread has ended
[2026-01-15 13:08:52] 2026-01-15 18:08:51,912 [wrapper] ==== pilot stdout END ====
[2026-01-15 13:08:52] 2026-01-15 18:08:51,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 13:08:52] 2026-01-15 18:08:51,919 [wrapper] pilotpid: 22399
[2026-01-15 13:08:52] 2026-01-15 18:08:51,922 [wrapper] Pilot exit status: 0
[2026-01-15 13:08:52] 2026-01-15 18:08:51,932 [wrapper] pandaids: 6971598497
[2026-01-15 13:08:52] 2026-01-15 18:08:51,968 [wrapper] cleanup supervisor_pilot 45073 22400
[2026-01-15 13:08:52] 2026-01-15 18:08:51,971 [wrapper] Test setup, not cleaning
[2026-01-15 13:08:52] 2026-01-15 18:08:51,973 [wrapper] apfmon messages muted
[2026-01-15 13:08:52] 2026-01-15 18:08:51,977 [wrapper] ==== wrapper stdout END ====
[2026-01-15 13:08:52] 2026-01-15 18:08:51,980 [wrapper] ==== wrapper stderr END ====
[2026-01-15 13:08:52]  *** Error codes and diagnostics ***
[2026-01-15 13:08:52]     "exeErrorCode": 0,
[2026-01-15 13:08:52]     "exeErrorDiag": "",
[2026-01-15 13:08:52]     "pilotErrorCode": 0,
[2026-01-15 13:08:52]     "pilotErrorDiag": "",
[2026-01-15 13:08:52]  *** Listing of results directory ***
[2026-01-15 13:08:52] total 729444
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas    584422 Jan 15 11:40 pilot3.tar.gz
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas      5111 Jan 15 12:03 queuedata.json
[2026-01-15 13:08:52] -rwx------ 1 boincer umatlas     36322 Jan 15 12:04 runpilot2-wrapper.sh
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas       100 Jan 15 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 13:08:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 12:05 run_atlas
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas       105 Jan 15 12:05 job.xml
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas 592710736 Jan 15 12:05 EVNT.32794306._001820.pool.root.1
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 12:05 start_atlas.sh
[2026-01-15 13:08:52] drwxrwx--x 2 boincer umatlas      4096 Jan 15 12:05 shared
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas    597773 Jan 15 12:05 input.tar.gz
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas         0 Jan 15 12:05 boinc_lockfile
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas      2506 Jan 15 12:05 pandaJob.out
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas        57 Jan 15 12:05 setup.sh.local
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas   1004091 Jan 15 12:05 agis_schedconf.cvmfs.json
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas   1516246 Jan 15 12:05 agis_ddmendpoints.agis.ALL.json
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas       438 Jan 15 12:05 workernode_map.json
[2026-01-15 13:08:52] drwx------ 5 boincer umatlas      4096 Jan 15 12:05 pilot3
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas      6034 Jan 15 13:00 init_data.xml
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas 148570284 Jan 15 13:07 HITS.48215263._052332.pool.root.1
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas       530 Jan 15 13:08 boinc_task_state.xml
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas      1039 Jan 15 13:08 memory_monitor_summary.json
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas        95 Jan 15 13:08 pilot_heartbeat.json
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas    302698 Jan 15 13:08 log.48215263._052332.job.log.tgz.1
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas      6384 Jan 15 13:08 heartbeat.json
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 13:08 boinc_mmap_file
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas        27 Jan 15 13:08 wrapper_checkpoint.txt
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas       815 Jan 15 13:08 pilotlog.txt
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas    564259 Jan 15 13:08 log.48215263._052332.job.log.1
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas       357 Jan 15 13:08 output.list
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas       620 Jan 15 13:08 runtime_log
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas    880640 Jan 15 13:08 result.tar.gz
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas      9331 Jan 15 13:08 runtime_log.err
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas       653 Jan 15 13:08 nCJMDmxwf08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLAvKDmQwb8vn.diag
[2026-01-15 13:08:52] -rw-r--r-- 1 boincer umatlas     21585 Jan 15 13:08 stderr.txt
[2026-01-15 13:08:52] HITS file was successfully produced:
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas 148570284 Jan 15 13:07 shared/HITS.pool.root.1
[2026-01-15 13:08:52]  *** Contents of shared directory: ***
[2026-01-15 13:08:52] total 725380
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas 592710736 Jan 15 12:05 ATLAS.root_0
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 12:05 start_atlas.sh
[2026-01-15 13:08:52] -rw-r--r-- 2 boincer umatlas    597773 Jan 15 12:05 input.tar.gz
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas 148570284 Jan 15 13:07 HITS.pool.root.1
[2026-01-15 13:08:52] -rw------- 1 boincer umatlas    880640 Jan 15 13:08 result.tar.gz
13:08:53 (18698): run_atlas exited; CPU time 26899.481327
13:08:53 (18698): called boinc_finish(0)

</stderr_txt>
]]>

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