Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:20 (739099): wrapper (7.7.26015): starting
11:56:20 (739099): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 11:56:20] Arguments: --nthreads 8
[2026-01-15 11:56:20] Threads: 8
[2026-01-15 11:56:20] Checking for CVMFS
[2026-01-15 11:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:56:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:56:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:56:22] 2.13.3.0 8759 30288 119908 155179 3 686 36768518 40960001 29524 16776704 0 189167943 99.702 141157312 47039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 11:56:22] CVMFS is ok
[2026-01-15 11:56:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:56:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:56:22] Further information can be found at the LHC@home message board.
[2026-01-15 11:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:56:22] Checking for apptainer binary...
[2026-01-15 11:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:56:22] Running /usr/bin/apptainer --version
[2026-01-15 11:56:22] apptainer version 1.4.5-2.el9
[2026-01-15 11:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:56:22] c-208-39.aglt2.org
[2026-01-15 11:56:22] apptainer works
[2026-01-15 11:56:23] Set ATHENA_PROC_NUMBER=8
[2026-01-15 11:56:23] Set ATHENA_CORE_NUMBER=8
[2026-01-15 11:56:23] Starting ATLAS job with PandaID=6970070050
[2026-01-15 11:56:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:59:39]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:59:39] 2026-01-15 17:58:28,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | sum of square deviations: 41114366.98039215
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | sum of deviations: -1063313717.5294119
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | mean x: 1768498207.0196078
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | mean y: 2576322.529411765
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | intersect: 45740077372.87837
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | chi2: 0.009844274695394591
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | current memory leak: -25.86 B/s (using 51 data points, chi2=0.01)
[2026-01-15 12:59:39] 2026-01-15 17:58:28,730 | INFO     | could have reported an average CPU frequency of 3752 MHz (5 samples)
[2026-01-15 12:59:39] 2026-01-15 17:58:29,448 | INFO     | time since job start (3663s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:31,250 | INFO     | monitor loop #251: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:31,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:31,456 | INFO     | time since job start (3665s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:33,463 | INFO     | time since job start (3667s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:33,754 | INFO     | monitor loop #252: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:33,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:35,470 | INFO     | time since job start (3669s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:36,259 | INFO     | monitor loop #253: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:36,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:37,478 | INFO     | time since job start (3671s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:38,764 | INFO     | monitor loop #254: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:38,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:39,486 | INFO     | time since job start (3673s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:41,269 | INFO     | monitor loop #255: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:41,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:41,468 | INFO     | PID=754713 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 12:59:39] 2026-01-15 17:58:41,469 | INFO     | .. there are 28 such processes running
[2026-01-15 12:59:39] 2026-01-15 17:58:42,469 | INFO     | time since job start (3676s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:43,774 | INFO     | monitor loop #256: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:43,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:44,476 | INFO     | time since job start (3678s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:46,285 | INFO     | monitor loop #257: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:46,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:46,482 | INFO     | time since job start (3680s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:48,489 | INFO     | time since job start (3682s) is within the limit (349056.0s)
[2026-01-15 12:59:39] 2026-01-15 17:58:48,790 | INFO     | monitor loop #258: job 0:6970070050 is in state 'finished'
[2026-01-15 12:59:39] 2026-01-15 17:58:48,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,648 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:59:39] 2026-01-15 17:58:49,653 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3760.3758203125
[2026-01-15 12:59:39] 2026-01-15 17:58:49,666 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6970070050/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,666 | INFO     | extracted standard info from prmon json
[2026-01-15 12:59:39] 2026-01-15 17:58:49,666 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:59:39] 2026-01-15 17:58:49,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:59:39] 2026-01-15 17:58:49,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:59:39] 2026-01-15 17:58:49,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | sum of square deviations: 41114366.98039215
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | sum of deviations: -1063313717.5294119
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | mean x: 1768498207.0196078
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | mean y: 2576322.529411765
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | intersect: 45740077372.87837
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | chi2: 0.009844274695394591
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | current memory leak: -25.86 B/s (using 51 data points, chi2=0.01)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | could have reported an average CPU frequency of 3753 MHz (6 samples)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | ..............................
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | . Timing measurements:
[2026-01-15 12:59:39] 2026-01-15 17:58:49,668 | INFO     | . get job = 0 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . initial setup = 3 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . payload setup = 34 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . stage-in = 0 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . payload execution = 3539 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . stage-out = 1 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | . log creation = 0 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,669 | INFO     | ..............................
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | 
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | job summary report
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | --------------------------------------------------
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | PanDA job id: 6970070050
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | task id: 48215263
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | errors: (none)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | pilot state: finished 
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | transexitcode: 0
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | exeerrorcode: 0
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | exeerrordiag: 
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | exitcode: 0
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | exitmsg: OK
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | cpuconsumptiontime: 16093 s
[2026-01-15 12:59:39] 2026-01-15 17:58:49,748 | INFO     | nevents: 400
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | neventsw: 0
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | pid: 789045
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | pgrp: 789045
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | corecount: 8
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | event service: False
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | sizes: {0: 2283952, 11: 2283952, 22: 2283980, 28: 2284270, 33: 2284298, 3578: 2310189, 3581: 2319243, 3622: 2319437}
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | --------------------------------------------------
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | 
[2026-01-15 12:59:39] 2026-01-15 17:58:49,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 12:59:39] 2026-01-15 17:58:49,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:59:39] 2026-01-15 17:58:49,859 | INFO     | job 6970070050 has completed (purged errors)
[2026-01-15 12:59:39] 2026-01-15 17:58:49,859 | INFO     | overall cleanup function is called
[2026-01-15 12:59:39] 2026-01-15 17:58:50,866 | INFO     | --- collectZombieJob: --- 10, [789045]
[2026-01-15 12:59:39] 2026-01-15 17:58:50,866 | INFO     | zombie collector waiting for pid 789045
[2026-01-15 12:59:39] 2026-01-15 17:58:50,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:59:39] 2026-01-15 17:58:50,867 | INFO     | collected zombie processes
[2026-01-15 12:59:39] 2026-01-15 17:58:50,867 | INFO     | will attempt to kill all subprocesses of pid=789045
[2026-01-15 12:59:39] 2026-01-15 17:58:52,061 | INFO     | process IDs to be killed: [789045] (in reverse order)
[2026-01-15 12:59:39] 2026-01-15 17:58:52,268 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:59:39] 2026-01-15 17:58:52,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:59:39] 2026-01-15 17:58:52,312 | INFO     | did not find any defunct processes belonging to 789045
[2026-01-15 12:59:39] 2026-01-15 17:58:52,407 | INFO     | did not find any defunct processes belonging to 789045
[2026-01-15 12:59:39] 2026-01-15 17:58:52,423 | INFO     | ready for new job
[2026-01-15 12:59:39] 2026-01-15 17:58:52,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:59:39] 2026-01-15 17:58:52,425 | INFO     | ***************************************
[2026-01-15 12:59:39] 2026-01-15 17:58:52,426 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:59:39] 2026-01-15 17:58:52,426 | INFO     | ***************************************
[2026-01-15 12:59:39] 2026-01-15 17:58:52,426 | INFO     | 
[2026-01-15 12:59:39] 2026-01-15 17:58:52,446 | INFO     | architecture information:
[2026-01-15 12:59:39] 2026-01-15 17:58:52,450 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:59:39] 2026-01-15 17:58:52,501 | INFO     | cat /etc/os-release:
[2026-01-15 12:59:39] NAME="CentOS Linux"
[2026-01-15 12:59:39] VERSION="7 (Core)"
[2026-01-15 12:59:39] ID="centos"
[2026-01-15 12:59:39] ID_LIKE="rhel fedora"
[2026-01-15 12:59:39] VERSION_ID="7"
[2026-01-15 12:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:59:39] ANSI_COLOR="0;31"
[2026-01-15 12:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:59:39] HOME_URL="https://www.centos.org/"
[2026-01-15 12:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:59:39] 
[2026-01-15 12:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:59:39] 
[2026-01-15 12:59:39] 2026-01-15 17:58:52,501 | INFO     | ***************************************
[2026-01-15 12:59:39] 2026-01-15 17:58:53,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 12:59:39] 2026-01-15 17:58:53,029 | INFO     | sufficient remaining disk space (169324052480 B)
[2026-01-15 12:59:39] 2026-01-15 17:58:53,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:59:39] 2026-01-15 17:58:53,030 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:59:39] 2026-01-15 17:58:53,030 | INFO     | update_server=False
[2026-01-15 12:59:39] 2026-01-15 17:58:53,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:59:39] 2026-01-15 17:58:53,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:59:39] 2026-01-15 17:58:53,031 | INFO     | aborting loop
[2026-01-15 12:59:39] 2026-01-15 17:58:54,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:59:39] 2026-01-15 17:58:54,012 | INFO     | all data control threads have been joined
[2026-01-15 12:59:39] 2026-01-15 17:58:54,035 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,036 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,058 | INFO     | [job] validate thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,084 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,103 | INFO     | all payload control threads have been joined
[2026-01-15 12:59:39] 2026-01-15 17:58:54,103 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,180 | INFO     | all job control threads have been joined
[2026-01-15 12:59:39] 2026-01-15 17:58:54,221 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,311 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,344 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,591 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:54,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:59:39] 2026-01-15 17:58:55,018 | INFO     | [data] control thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:55,109 | INFO     | [payload] control thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:55,186 | INFO     | [job] control thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:55,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:59:39] 2026-01-15 17:58:55,776 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:56,014 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:58:59,251 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:59:39] 2026-01-15 17:59:23,029 | INFO     | PID=754713 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 12:59:39] 2026-01-15 17:59:23,052 | INFO     | .. there are 28 such processes running
[2026-01-15 12:59:39] 2026-01-15 17:59:23,052 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:59:39] 2026-01-15 17:59:23,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:59:39] 2026-01-15 17:59:23,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:59:39] 2026-01-15 17:59:31,898 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:59:39] 2026-01-15 17:59:32,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930496427840)>', '<ExcThread(monitor, started 139930151933696)>']
[2026-01-15 12:59:39] 2026-01-15 17:59:33,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:59:39] 2026-01-15 17:59:33,112 | INFO     | [monitor] control thread has ended
[2026-01-15 12:59:39] 2026-01-15 17:59:37,942 | INFO     | all workflow threads have been joined
[2026-01-15 12:59:39] 2026-01-15 17:59:37,943 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:59:39] 2026-01-15 17:59:37,943 | INFO     | traces error code: 0
[2026-01-15 12:59:39] 2026-01-15 17:59:37,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:59:39] 2026-01-15 17:59:38,099 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:59:39] 2026-01-15 17:59:38,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:59:39] 2026-01-15 17:59:38,146 [wrapper] pilotpid: 754713
[2026-01-15 12:59:39] 2026-01-15 17:59:38,194 [wrapper] Pilot exit status: 0
[2026-01-15 12:59:39] 2026-01-15 17:59:38,258 [wrapper] pandaids: 6970070050
[2026-01-15 12:59:39] 2026-01-15 17:59:38,386 [wrapper] cleanup supervisor_pilot 1124986 754714
[2026-01-15 12:59:39] 2026-01-15 17:59:38,399 [wrapper] Test setup, not cleaning
[2026-01-15 12:59:39] 2026-01-15 17:59:38,427 [wrapper] apfmon messages muted
[2026-01-15 12:59:39] 2026-01-15 17:59:38,454 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:59:39] 2026-01-15 17:59:38,468 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:59:39]  *** Error codes and diagnostics ***
[2026-01-15 12:59:39]     "exeErrorCode": 0,
[2026-01-15 12:59:39]     "exeErrorDiag": "",
[2026-01-15 12:59:39]     "pilotErrorCode": 0,
[2026-01-15 12:59:39]     "pilotErrorDiag": "",
[2026-01-15 12:59:39]  *** Listing of results directory ***
[2026-01-15 12:59:39] total 740972
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 12:59:39] -rwx------. 1 boincer umatlas     36322 Jan 14 22:03 runpilot2-wrapper.sh
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 22:05 queuedata.json
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:59:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:56 run_atlas
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:56 job.xml
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas 597628926 Jan 15 11:56 EVNT.32794306._001670.pool.root.1
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:56 start_atlas.sh
[2026-01-15 12:59:39] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:56 shared
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas    592401 Jan 15 11:56 input.tar.gz
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:56 boinc_lockfile
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 11:56 pandaJob.out
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas        57 Jan 15 11:56 setup.sh.local
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas   1004091 Jan 15 11:57 agis_schedconf.cvmfs.json
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:57 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:59:39] drwx------. 5 boincer umatlas      4096 Jan 15 11:57 pilot3
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas 155547130 Jan 15 12:57 HITS.48215263._041889.pool.root.1
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:57 boinc_task_state.xml
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas      7184 Jan 15 12:57 init_data.xml
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas      1048 Jan 15 12:58 memory_monitor_summary.json
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas    303044 Jan 15 12:58 log.48215263._041889.job.log.tgz.1
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas        95 Jan 15 12:58 pilot_heartbeat.json
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas      7802 Jan 15 12:58 heartbeat.json
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:59 boinc_mmap_file
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:59 wrapper_checkpoint.txt
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas      4824 Jan 15 12:59 pilotlog.txt
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas    522377 Jan 15 12:59 log.48215263._041889.job.log.1
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas       357 Jan 15 12:59 output.list
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:59 runtime_log
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas    839680 Jan 15 12:59 result.tar.gz
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas       656 Jan 15 12:59 zPDMDmMpS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpinKDmA4M9In.diag
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas      9342 Jan 15 12:59 runtime_log.err
[2026-01-15 12:59:39] -rw-r--r--. 1 boincer umatlas     22113 Jan 15 12:59 stderr.txt
[2026-01-15 12:59:39] HITS file was successfully produced:
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas 155547130 Jan 15 12:57 shared/HITS.pool.root.1
[2026-01-15 12:59:39]  *** Contents of shared directory: ***
[2026-01-15 12:59:39] total 736952
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas 597628926 Jan 15 11:56 ATLAS.root_0
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:56 start_atlas.sh
[2026-01-15 12:59:39] -rw-r--r--. 2 boincer umatlas    592401 Jan 15 11:56 input.tar.gz
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas 155547130 Jan 15 12:57 HITS.pool.root.1
[2026-01-15 12:59:39] -rw-------. 1 boincer umatlas    839680 Jan 15 12:59 result.tar.gz
12:59:40 (739099): run_atlas exited; CPU time 16220.890505
12:59:40 (739099): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN