Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:48 (744862): wrapper (7.7.26015): starting
11:56:48 (744862): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 11:56:48] Arguments: --nthreads 8
[2026-01-15 11:56:48] Threads: 8
[2026-01-15 11:56:48] Checking for CVMFS
[2026-01-15 11:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:56:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:56:50] 2.13.3.0 8759 30288 120028 155179 3 692 36768518 40960001 29544 16776704 0 189184224 99.702 141157312 47039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 11:56:50] CVMFS is ok
[2026-01-15 11:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:56:50] Further information can be found at the LHC@home message board.
[2026-01-15 11:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:56:50] Checking for apptainer binary...
[2026-01-15 11:56:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:56:50] Running /usr/bin/apptainer --version
[2026-01-15 11:56:50] apptainer version 1.4.5-2.el9
[2026-01-15 11:56:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:56:50] c-208-39.aglt2.org
[2026-01-15 11:56:50] apptainer works
[2026-01-15 11:56:50] Set ATHENA_PROC_NUMBER=8
[2026-01-15 11:56:50] Set ATHENA_CORE_NUMBER=8
[2026-01-15 11:56:50] Starting ATLAS job with PandaID=6966848150
[2026-01-15 11:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 19:52:27]  *** The last 200 lines of the pilot log: ***
[2026-01-15 19:52:27] 2026-01-16 00:51:31,584 | INFO     | time since job start (28420s) is within the limit (349056.0s)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,362 | INFO     | PID=764244 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 19:52:27] 2026-01-16 00:51:33,362 | INFO     | .. there are 24 such processes running
[2026-01-15 19:52:27] 2026-01-16 00:51:33,908 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 19:52:27] 2026-01-16 00:51:33,913 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3718.118703125001
[2026-01-15 19:52:27] 2026-01-16 00:51:33,936 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966848150/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,936 | INFO     | extracted standard info from prmon json
[2026-01-15 19:52:27] 2026-01-16 00:51:33,936 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 19:52:27] 2026-01-16 00:51:33,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 19:52:27] 2026-01-16 00:51:33,941 | INFO     | fitting pss+swap vs Time
[2026-01-15 19:52:27] 2026-01-16 00:51:33,942 | INFO     | sum of square deviations: 30777357770.366932
[2026-01-15 19:52:27] 2026-01-16 00:51:33,945 | INFO     | sum of deviations: 605978771081.7473
[2026-01-15 19:52:27] 2026-01-16 00:51:33,945 | INFO     | mean x: 1768510525.7149029
[2026-01-15 19:52:27] 2026-01-16 00:51:33,945 | INFO     | mean y: 3426272.384449244
[2026-01-15 19:52:27] 2026-01-16 00:51:33,945 | INFO     | intersect: -34816971339.83965
[2026-01-15 19:52:27] 2026-01-16 00:51:33,945 | INFO     | chi2: 7.32947646351429
[2026-01-15 19:52:27] 2026-01-16 00:51:33,946 | INFO     | sum of square deviations: 29791105345.283764
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | sum of deviations: 766749202312.607
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | mean x: 1768510373.2227075
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | mean y: 3451102.268558952
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | intersect: -45513621937.948494
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | chi2: 4.757350751264456
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | current chi2=4.757350751264456 (change=35.09289817702161 %)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,949 | INFO     | sum of square deviations: 28826071710.5078
[2026-01-15 19:52:27] 2026-01-16 00:51:33,952 | INFO     | sum of deviations: 749306644478.3529
[2026-01-15 19:52:27] 2026-01-16 00:51:33,952 | INFO     | mean x: 1768510220.7240617
[2026-01-15 19:52:27] 2026-01-16 00:51:33,952 | INFO     | mean y: 3448342.242825607
[2026-01-15 19:52:27] 2026-01-16 00:51:33,952 | INFO     | intersect: -45967312867.42162
[2026-01-15 19:52:27] 2026-01-16 00:51:33,953 | INFO     | chi2: 4.75560336482518
[2026-01-15 19:52:27] 2026-01-16 00:51:33,953 | INFO     | current chi2=4.75560336482518 (change=0.03673024190641482 %)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,953 | INFO     | right removable region: 452
[2026-01-15 19:52:27] 2026-01-16 00:51:33,953 | INFO     | sum of square deviations: 29790903435.283756
[2026-01-15 19:52:27] 2026-01-16 00:51:33,956 | INFO     | sum of deviations: 385973185485.86847
[2026-01-15 19:52:27] 2026-01-16 00:51:33,956 | INFO     | mean x: 1768510678.2227075
[2026-01-15 19:52:27] 2026-01-16 00:51:33,956 | INFO     | mean y: 3460275.5895196507
[2026-01-15 19:52:27] 2026-01-16 00:51:33,956 | INFO     | intersect: -22909497081.41822
[2026-01-15 19:52:27] 2026-01-16 00:51:33,957 | INFO     | chi2: 3.1635513235972534
[2026-01-15 19:52:27] 2026-01-16 00:51:33,957 | INFO     | current chi2=3.1635513235972534 (change=56.83796326592725 %)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,957 | INFO     | sum of square deviations: 28825835396.507774
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | sum of deviations: 326238855305.1215
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | mean x: 1768510830.7240617
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | mean y: 3469676.5209713024
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | intersect: -20011802771.750385
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | chi2: 2.7405655150137394
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | current chi2=2.7405655150137394 (change=13.37060048396938 %)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,960 | INFO     | left removable region: 20
[2026-01-15 19:52:27] 2026-01-16 00:51:33,961 | INFO     | sum of square deviations: 25000184271.76849
[2026-01-15 19:52:27] 2026-01-16 00:51:33,963 | INFO     | sum of deviations: 426531033942.3473
[2026-01-15 19:52:27] 2026-01-16 00:51:33,963 | INFO     | mean x: 1768510800.226852
[2026-01-15 19:52:27] 2026-01-16 00:51:33,963 | INFO     | mean y: 3500050.659722222
[2026-01-15 19:52:27] 2026-01-16 00:51:33,963 | INFO     | intersect: -30169267156.132027
[2026-01-15 19:52:27] 2026-01-16 00:51:33,964 | INFO     | chi2: 0.0732173079834935
[2026-01-15 19:52:27] 2026-01-16 00:51:33,964 | INFO     | current memory leak: 17.06 B/s (using 432 data points, chi2=0.07)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,964 | INFO     | could have reported an average CPU frequency of 3737 MHz (19 samples)
[2026-01-15 19:52:27] 2026-01-16 00:51:33,964 | INFO     | ..............................
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . Timing measurements:
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . get job = 0 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . initial setup = 5 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . payload setup = 72 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . stage-in = 0 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . payload execution = 28257 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . stage-out = 3 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | . log creation = 0 s
[2026-01-15 19:52:27] 2026-01-16 00:51:33,965 | INFO     | ..............................
[2026-01-15 19:52:27] 2026-01-16 00:51:34,159 | INFO     | 
[2026-01-15 19:52:27] 2026-01-16 00:51:34,159 | INFO     | job summary report
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | --------------------------------------------------
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | PanDA job id: 6966848150
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | task id: 48187943
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | errors: (none)
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | pilot state: finished 
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | transexitcode: 0
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | exeerrorcode: 0
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | exeerrordiag: 
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | exitcode: 0
[2026-01-15 19:52:27] 2026-01-16 00:51:34,161 | INFO     | exitmsg: OK
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | cpuconsumptiontime: 179035 s
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | nevents: 2050
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | neventsw: 0
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | pid: 813704
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | pgrp: 813704
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | corecount: 8
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | event service: False
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | sizes: {0: 2284448, 1: 2284647, 12: 2284647, 23: 2284675, 30: 2284965, 34: 2284993, 28334: 2342720, 28337: 2351718, 28339: 2351774, 28361: 2352020}
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | --------------------------------------------------
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | 
[2026-01-15 19:52:27] 2026-01-16 00:51:34,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | job 6966848150 has completed (purged errors)
[2026-01-15 19:52:27] 2026-01-16 00:51:34,239 | INFO     | overall cleanup function is called
[2026-01-15 19:52:27] 2026-01-16 00:51:35,258 | INFO     | --- collectZombieJob: --- 10, [813704]
[2026-01-15 19:52:27] 2026-01-16 00:51:35,258 | INFO     | zombie collector waiting for pid 813704
[2026-01-15 19:52:27] 2026-01-16 00:51:35,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 19:52:27] 2026-01-16 00:51:35,258 | INFO     | collected zombie processes
[2026-01-15 19:52:27] 2026-01-16 00:51:35,259 | INFO     | will attempt to kill all subprocesses of pid=813704
[2026-01-15 19:52:27] 2026-01-16 00:51:35,840 | INFO     | process IDs to be killed: [813704] (in reverse order)
[2026-01-15 19:52:27] 2026-01-16 00:51:36,081 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 19:52:27] 2026-01-16 00:51:36,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 19:52:27] 2026-01-16 00:51:36,113 | INFO     | did not find any defunct processes belonging to 813704
[2026-01-15 19:52:27] 2026-01-16 00:51:36,154 | INFO     | did not find any defunct processes belonging to 813704
[2026-01-15 19:52:27] 2026-01-16 00:51:36,154 | INFO     | ready for new job
[2026-01-15 19:52:27] 2026-01-16 00:51:36,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 19:52:27] 2026-01-16 00:51:36,160 | INFO     | ***************************************
[2026-01-15 19:52:27] 2026-01-16 00:51:36,160 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 19:52:27] 2026-01-16 00:51:36,160 | INFO     | ***************************************
[2026-01-15 19:52:27] 2026-01-16 00:51:36,160 | INFO     | 
[2026-01-15 19:52:27] 2026-01-16 00:51:36,172 | INFO     | architecture information:
[2026-01-15 19:52:27] 2026-01-16 00:51:36,179 | INFO     | executing command: cat /etc/os-release
[2026-01-15 19:52:27] 2026-01-16 00:51:36,241 | INFO     | cat /etc/os-release:
[2026-01-15 19:52:27] NAME="CentOS Linux"
[2026-01-15 19:52:27] VERSION="7 (Core)"
[2026-01-15 19:52:27] ID="centos"
[2026-01-15 19:52:27] ID_LIKE="rhel fedora"
[2026-01-15 19:52:27] VERSION_ID="7"
[2026-01-15 19:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 19:52:27] ANSI_COLOR="0;31"
[2026-01-15 19:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 19:52:27] HOME_URL="https://www.centos.org/"
[2026-01-15 19:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 19:52:27] 
[2026-01-15 19:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 19:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 19:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 19:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 19:52:27] 
[2026-01-15 19:52:27] 2026-01-16 00:51:36,241 | INFO     | ***************************************
[2026-01-15 19:52:27] 2026-01-16 00:51:36,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 19:52:27] 2026-01-16 00:51:36,851 | INFO     | sufficient remaining disk space (172511723520 B)
[2026-01-15 19:52:27] 2026-01-16 00:51:36,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 19:52:27] 2026-01-16 00:51:36,851 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 19:52:27] 2026-01-16 00:51:36,851 | INFO     | update_server=False
[2026-01-15 19:52:27] 2026-01-16 00:51:36,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 19:52:27] 2026-01-16 00:51:37,063 | INFO     | all payload control threads have been joined
[2026-01-15 19:52:27] 2026-01-16 00:51:37,226 | INFO     | all data control threads have been joined
[2026-01-15 19:52:27] 2026-01-16 00:51:37,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 19:52:27] 2026-01-16 00:51:37,568 | INFO     | aborting loop
[2026-01-15 19:52:27] 2026-01-16 00:51:37,728 | INFO     | all job control threads have been joined
[2026-01-15 19:52:27] 2026-01-16 00:51:37,857 | INFO     | [job] retrieve thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 19:52:27] 2026-01-16 00:51:38,071 | INFO     | [payload] control thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,072 | INFO     | [job] validate thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,232 | INFO     | [data] control thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,573 | INFO     | [job] job monitor thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,733 | INFO     | [job] control thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,788 | INFO     | [data] copytool_in thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:38,811 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:39,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 19:52:27] 2026-01-16 00:51:39,085 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:39,289 | INFO     | [monitor] cgroup control has ended
[2026-01-15 19:52:27] 2026-01-16 00:51:39,293 | INFO     | [payload] failed_post thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:39,311 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:39,441 | INFO     | [payload] validate_post thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:40,021 | INFO     | [data] copytool_out thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:40,089 | INFO     | [job] queue monitor thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:40,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 19:52:27] 2026-01-16 00:51:44,201 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:46,935 | INFO     | job.realtimelogging is not enabled
[2026-01-15 19:52:27] 2026-01-16 00:51:47,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 19:52:27] 2026-01-16 00:51:48,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672860821312)>', '<ExcThread(monitor, started 140672510187264)>']
[2026-01-15 19:52:27] 2026-01-16 00:51:53,604 | INFO     | all workflow threads have been joined
[2026-01-15 19:52:27] 2026-01-16 00:51:53,604 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 19:52:27] 2026-01-16 00:51:53,605 | INFO     | traces error code: 0
[2026-01-15 19:52:27] 2026-01-16 00:51:53,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 19:52:27] 2026-01-16 00:52:06,042 | INFO     | PID=764244 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | INFO     | .. there are 24 such processes running
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 19:52:27] 2026-01-16 00:52:06,043 | INFO     | [monitor] control thread has ended
[2026-01-15 19:52:27] 2026-01-16 00:52:06,315 [wrapper] ==== pilot stdout END ====
[2026-01-15 19:52:27] 2026-01-16 00:52:06,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 19:52:27] 2026-01-16 00:52:06,382 [wrapper] pilotpid: 764244
[2026-01-15 19:52:27] 2026-01-16 00:52:06,409 [wrapper] Pilot exit status: 0
[2026-01-15 19:52:27] 2026-01-16 00:52:06,487 [wrapper] pandaids: 6966848150
[2026-01-15 19:52:27] 2026-01-16 00:52:06,697 [wrapper] cleanup supervisor_pilot 3120902 764245
[2026-01-15 19:52:27] 2026-01-16 00:52:06,713 [wrapper] Test setup, not cleaning
[2026-01-15 19:52:27] 2026-01-16 00:52:06,732 [wrapper] apfmon messages muted
[2026-01-15 19:52:27] 2026-01-16 00:52:06,771 [wrapper] ==== wrapper stdout END ====
[2026-01-15 19:52:27] 2026-01-16 00:52:06,775 [wrapper] ==== wrapper stderr END ====
[2026-01-15 19:52:27]  *** Error codes and diagnostics ***
[2026-01-15 19:52:27]     "exeErrorCode": 0,
[2026-01-15 19:52:27]     "exeErrorDiag": "",
[2026-01-15 19:52:27]     "pilotErrorCode": 0,
[2026-01-15 19:52:27]     "pilotErrorDiag": "",
[2026-01-15 19:52:27]  *** Listing of results directory ***
[2026-01-15 19:52:27] total 1475320
[2026-01-15 19:52:27] -rwx------. 1 boincer umatlas      36322 Jan 12 03:50 runpilot2-wrapper.sh
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:50 queuedata.json
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas        100 Jan 15 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 19:52:27] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 15 11:56 run_atlas
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas        105 Jan 15 11:56 job.xml
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas  320061279 Jan 15 11:56 EVNT.48118027._000088.pool.root.1
[2026-01-15 19:52:27] drwxrwx--x. 2 boincer umatlas       4096 Jan 15 11:56 shared
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas     592605 Jan 15 11:56 input.tar.gz
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas      15847 Jan 15 11:56 start_atlas.sh
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas          0 Jan 15 11:56 boinc_lockfile
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas       2895 Jan 15 11:56 pandaJob.out
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas         57 Jan 15 11:56 setup.sh.local
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    1004091 Jan 15 11:57 agis_schedconf.cvmfs.json
[2026-01-15 19:52:27] drwx------. 5 boincer umatlas       4096 Jan 15 11:57 pilot3
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas        533 Jan 15 19:45 boinc_task_state.xml
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas       7186 Jan 15 19:49 init_data.xml
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas 1174872494 Jan 15 19:50 HITS.48187943._000428.pool.root.1
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas       1076 Jan 15 19:51 memory_monitor_summary.json
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    1516246 Jan 15 19:51 agis_ddmendpoints.agis.ALL.json
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    2100508 Jan 15 19:51 log.48187943._000428.job.log.tgz.1
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas         95 Jan 15 19:51 pilot_heartbeat.json
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas      27506 Jan 15 19:51 heartbeat.json
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas        822 Jan 15 19:52 pilotlog.txt
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    3813101 Jan 15 19:52 log.48187943._000428.job.log.1
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas        353 Jan 15 19:52 output.list
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas        620 Jan 15 19:52 runtime_log
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    5949440 Jan 15 19:52 result.tar.gz
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas       9343 Jan 15 19:52 runtime_log.err
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas        666 Jan 15 19:52 qljLDmxnSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1DnKDmouOIFo.diag
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas       8192 Jan 15 19:52 boinc_mmap_file
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas         29 Jan 15 19:52 wrapper_checkpoint.txt
[2026-01-15 19:52:27] -rw-r--r--. 1 boincer umatlas      21288 Jan 15 19:52 stderr.txt
[2026-01-15 19:52:27] HITS file was successfully produced:
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas 1174872494 Jan 15 19:50 shared/HITS.pool.root.1
[2026-01-15 19:52:27]  *** Contents of shared directory: ***
[2026-01-15 19:52:27] total 1466316
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas  320061279 Jan 15 11:56 ATLAS.root_0
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas     592605 Jan 15 11:56 input.tar.gz
[2026-01-15 19:52:27] -rw-r--r--. 2 boincer umatlas      15847 Jan 15 11:56 start_atlas.sh
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas 1174872494 Jan 15 19:50 HITS.pool.root.1
[2026-01-15 19:52:27] -rw-------. 1 boincer umatlas    5949440 Jan 15 19:52 result.tar.gz
19:52:29 (744862): run_atlas exited; CPU time 179136.651965
19:52:29 (744862): called boinc_finish(0)

</stderr_txt>
]]>

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