Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:40:29 (3836): wrapper (7.7.26015): starting
11:40:29 (3836): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 11:40:29] Arguments: --nthreads 8
[2026-01-15 11:40:29] Threads: 8
[2026-01-15 11:40:29] Checking for CVMFS
[2026-01-15 11:40:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:40:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:40:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:40:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:40:29] 2.11.2.0 27562 406320 310368 155179 3 57 15918777 18432000 1833 130560 7 734288270 99.364 1130192419 26006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 11:40:29] CVMFS is ok
[2026-01-15 11:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:40:29] Further information can be found at the LHC@home message board.
[2026-01-15 11:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:40:29] Checking for apptainer binary...
[2026-01-15 11:40:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:40:29] Running /usr/bin/apptainer --version
[2026-01-15 11:40:29] apptainer version 1.3.2-1.el7
[2026-01-15 11:40:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:40:30] c-9-30.aglt2.org
[2026-01-15 11:40:30] apptainer works
[2026-01-15 11:40:30] Set ATHENA_PROC_NUMBER=8
[2026-01-15 11:40:30] Set ATHENA_CORE_NUMBER=8
[2026-01-15 11:40:30] Starting ATLAS job with PandaID=6971581410
[2026-01-15 11:40:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:46:01]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:46:01]  guid=312b4d53-8389-40f8-a03f-252c0acdfeb5
[2026-01-15 12:46:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-15 12:46:01]  is_altstaged=None
[2026-01-15 12:46:01]  is_tar=False
[2026-01-15 12:46:01]  lfn=log.48215263._052311.job.log.tgz.1
[2026-01-15 12:46:01]  mtime=0
[2026-01-15 12:46:01]  protocol_id=None
[2026-01-15 12:46:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 12:46:01]  replicas=None
[2026-01-15 12:46:01]  scope=mc23_13p6TeV
[2026-01-15 12:46:01]  status=None
[2026-01-15 12:46:01]  status_code=0
[2026-01-15 12:46:01]  storage_token=
[2026-01-15 12:46:01]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6971581410/log.48215263._052311.job.log.tgz.1
[2026-01-15 12:46:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/1e/log.48215263._052311.job.log.tgz.1
[2026-01-15 12:46:01]  workdir=None
[2026-01-15 12:46:01] ]
[2026-01-15 12:46:01] 2026-01-15 17:45:27,425 | INFO     | transferring file log.48215263._052311.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6971581410/log.48215263._052311.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 12:46:01] 2026-01-15 17:45:27,425 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6971581410/log.48215263._052311.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._052311.job
[2026-01-15 12:46:01] 2026-01-15 17:45:27,437 | INFO     | adding to output.list: log.48215263._052311.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/1e/log.48215263._052311.job.log.tg
[2026-01-15 12:46:01] 2026-01-15 17:45:27,438 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 12:46:01] 2026-01-15 17:45:27,438 | INFO     | summary of transferred files:
[2026-01-15 12:46:01] 2026-01-15 17:45:27,438 | INFO     |  -- lfn=log.48215263._052311.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 12:46:01] 2026-01-15 17:45:27,438 | INFO     | stage-out finished correctly
[2026-01-15 12:46:01] 2026-01-15 17:45:27,739 | INFO     | time since job start (3883s) is within the limit (349056.0s)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,013 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:46:01] 2026-01-15 17:45:28,071 | INFO     | job 6971581410 has state=finished
[2026-01-15 12:46:01] 2026-01-15 17:45:28,071 | INFO     | preparing for final server update for job 6971581410 in state='finished'
[2026-01-15 12:46:01] 2026-01-15 17:45:28,072 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6971581410/jobReport.json
[2026-01-15 12:46:01] 2026-01-15 17:45:28,073 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-15 12:46:01] 2026-01-15 17:45:28,073 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,074 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,074 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:46:01] 2026-01-15 17:45:28,074 | INFO     | job 6971581410 has finished - writing final server update
[2026-01-15 12:46:01] 2026-01-15 17:45:28,074 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,077 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6971581410/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,078 | INFO     | extracted standard info from prmon json
[2026-01-15 12:46:01] 2026-01-15 17:45:28,078 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:46:01] 2026-01-15 17:45:28,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:46:01] 2026-01-15 17:45:28,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:46:01] 2026-01-15 17:45:28,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:46:01] 2026-01-15 17:45:28,079 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | sum of square deviations: 57407588.0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | sum of deviations: -6242925744.999999
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | mean x: 1768497277.0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | mean y: 2637598.701754386
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | intersect: 192322112518.03986
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | chi2: 0.025729129916969375
[2026-01-15 12:46:01] 2026-01-15 17:45:28,080 | INFO     | current memory leak: -108.75 B/s (using 57 data points, chi2=0.03)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | could have reported an average CPU frequency of 2999 MHz (6 samples)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | ..............................
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . Timing measurements:
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . get job = 0 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . initial setup = 5 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . payload setup = 4 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . stage-in = 0 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . payload execution = 3862 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,081 | INFO     | . stage-out = 0 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,082 | INFO     | . log creation = 0 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,082 | INFO     | ..............................
[2026-01-15 12:46:01] 2026-01-15 17:45:28,358 | INFO     | 
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | job summary report
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | --------------------------------------------------
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | PanDA job id: 6971581410
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | task id: 48215263
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | errors: (none)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | pilot state: finished 
[2026-01-15 12:46:01] 2026-01-15 17:45:28,359 | INFO     | transexitcode: 0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | exeerrorcode: 0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | exeerrordiag: 
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | exitcode: 0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | exitmsg: OK
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | cpuconsumptiontime: 28752 s
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | nevents: 400
[2026-01-15 12:46:01] 2026-01-15 17:45:28,360 | INFO     | neventsw: 0
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | pid: 13094
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | pgrp: 13094
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | corecount: 8
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | event service: False
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | sizes: {0: 2283955, 1: 2284161, 11: 2284189, 3871: 2310109, 3872: 2319107, 3873: 2319485}
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | --------------------------------------------------
[2026-01-15 12:46:01] 2026-01-15 17:45:28,361 | INFO     | 
[2026-01-15 12:46:01] 2026-01-15 17:45:28,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:46:01] 2026-01-15 17:45:28,375 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:46:01] 2026-01-15 17:45:28,378 | INFO     | job 6971581410 has completed (purged errors)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,379 | INFO     | overall cleanup function is called
[2026-01-15 12:46:01] 2026-01-15 17:45:28,457 | WARNING  | process 13094 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 12:46:01] 2026-01-15 17:45:28,561 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:46:01] 2026-01-15 17:45:28,695 | INFO     | number of running child processes to parent process 13094: 1
[2026-01-15 12:46:01] 2026-01-15 17:45:28,696 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:46:01] 2026-01-15 17:45:28,696 | INFO     | aborting job monitoring since job object (job id=6971581410) has expired
[2026-01-15 12:46:01] 2026-01-15 17:45:29,387 | INFO     | --- collectZombieJob: --- 10, [13094]
[2026-01-15 12:46:01] 2026-01-15 17:45:29,387 | INFO     | zombie collector waiting for pid 13094
[2026-01-15 12:46:01] 2026-01-15 17:45:29,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:46:01] 2026-01-15 17:45:29,387 | INFO     | collected zombie processes
[2026-01-15 12:46:01] 2026-01-15 17:45:29,387 | INFO     | will attempt to kill all subprocesses of pid=13094
[2026-01-15 12:46:01] 2026-01-15 17:45:29,517 | INFO     | process IDs to be killed: [13094] (in reverse order)
[2026-01-15 12:46:01] 2026-01-15 17:45:29,561 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:46:01] 2026-01-15 17:45:29,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:46:01] 2026-01-15 17:45:29,565 | INFO     | did not find any defunct processes belonging to 13094
[2026-01-15 12:46:01] 2026-01-15 17:45:29,568 | INFO     | did not find any defunct processes belonging to 13094
[2026-01-15 12:46:01] 2026-01-15 17:45:29,568 | INFO     | ready for new job
[2026-01-15 12:46:01] 2026-01-15 17:45:29,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:46:01] 2026-01-15 17:45:29,570 | INFO     | **************************************
[2026-01-15 12:46:01] 2026-01-15 17:45:29,570 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-15 12:46:01] 2026-01-15 17:45:29,570 | INFO     | **************************************
[2026-01-15 12:46:01] 2026-01-15 17:45:29,570 | INFO     | 
[2026-01-15 12:46:01] 2026-01-15 17:45:29,571 | INFO     | architecture information:
[2026-01-15 12:46:01] 2026-01-15 17:45:29,572 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:46:01] 2026-01-15 17:45:29,581 | INFO     | cat /etc/os-release:
[2026-01-15 12:46:01] NAME="CentOS Linux"
[2026-01-15 12:46:01] VERSION="7 (Core)"
[2026-01-15 12:46:01] ID="centos"
[2026-01-15 12:46:01] ID_LIKE="rhel fedora"
[2026-01-15 12:46:01] VERSION_ID="7"
[2026-01-15 12:46:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:46:01] ANSI_COLOR="0;31"
[2026-01-15 12:46:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:46:01] HOME_URL="https://www.centos.org/"
[2026-01-15 12:46:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:46:01] 
[2026-01-15 12:46:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:46:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:46:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:46:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:46:01] 
[2026-01-15 12:46:01] 2026-01-15 17:45:29,581 | INFO     | **************************************
[2026-01-15 12:46:01] 2026-01-15 17:45:30,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:46:01] 2026-01-15 17:45:30,096 | INFO     | sufficient remaining disk space (104575533056 B)
[2026-01-15 12:46:01] 2026-01-15 17:45:30,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:46:01] 2026-01-15 17:45:30,097 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:46:01] 2026-01-15 17:45:30,097 | INFO     | update_server=False
[2026-01-15 12:46:01] 2026-01-15 17:45:30,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:46:01] 2026-01-15 17:45:30,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:46:01] 2026-01-15 17:45:30,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:46:01] 2026-01-15 17:45:30,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:46:01] 2026-01-15 17:45:30,098 | INFO     | aborting loop
[2026-01-15 12:46:01] 2026-01-15 17:45:30,188 | INFO     | all payload control threads have been joined
[2026-01-15 12:46:01] 2026-01-15 17:45:30,278 | INFO     | all data control threads have been joined
[2026-01-15 12:46:01] 2026-01-15 17:45:30,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:46:01] 2026-01-15 17:45:30,525 | INFO     | all job control threads have been joined
[2026-01-15 12:46:01] 2026-01-15 17:45:31,103 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,103 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,104 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,193 | INFO     | [payload] control thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,207 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,259 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,283 | INFO     | [data] control thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,526 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,531 | INFO     | [job] control thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,660 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:31,838 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:32,014 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:32,410 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:32,500 | INFO     | [job] validate thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:32,511 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:34,104 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:46:01] 2026-01-15 17:45:49,100 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:46:01] 2026-01-15 17:45:49,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587147089728)>', '<ExcThread(monitor, started 140586493409024)>']
[2026-01-15 12:46:01] 2026-01-15 17:45:54,163 | INFO     | all workflow threads have been joined
[2026-01-15 12:46:01] 2026-01-15 17:45:54,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:46:01] 2026-01-15 17:45:54,164 | INFO     | traces error code: 0
[2026-01-15 12:46:01] 2026-01-15 17:45:54,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:46:01] 2026-01-15 17:46:00,975 | INFO     | PID=7542 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 12:46:01] 2026-01-15 17:46:00,975 | INFO     | .. there are 2 such processes running
[2026-01-15 12:46:01] 2026-01-15 17:46:00,976 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:46:01] 2026-01-15 17:46:00,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:46:01] 2026-01-15 17:46:00,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:46:01] 2026-01-15 17:46:00,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:46:01] 2026-01-15 17:46:00,976 | INFO     | [monitor] control thread has ended
[2026-01-15 12:46:01] 2026-01-15 17:46:01,059 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:46:01] 2026-01-15 17:46:01,061 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:46:01] 2026-01-15 17:46:01,063 [wrapper] pilotpid: 7542
[2026-01-15 12:46:01] 2026-01-15 17:46:01,065 [wrapper] Pilot exit status: 0
[2026-01-15 12:46:01] 2026-01-15 17:46:01,071 [wrapper] pandaids: 6971581410
[2026-01-15 12:46:01] 2026-01-15 17:46:01,103 [wrapper] cleanup supervisor_pilot 47659 7543
[2026-01-15 12:46:01] 2026-01-15 17:46:01,105 [wrapper] Test setup, not cleaning
[2026-01-15 12:46:01] 2026-01-15 17:46:01,107 [wrapper] apfmon messages muted
[2026-01-15 12:46:01] 2026-01-15 17:46:01,109 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:46:01] 2026-01-15 17:46:01,111 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:46:01]  *** Error codes and diagnostics ***
[2026-01-15 12:46:01]     "exeErrorCode": 0,
[2026-01-15 12:46:01]     "exeErrorDiag": "",
[2026-01-15 12:46:01]     "pilotErrorCode": 0,
[2026-01-15 12:46:01]     "pilotErrorDiag": "",
[2026-01-15 12:46:01]  *** Listing of results directory ***
[2026-01-15 12:46:01] total 726068
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas    584422 Jan 15 11:11 pilot3.tar.gz
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas      5111 Jan 15 11:38 queuedata.json
[2026-01-15 12:46:01] -rwx------ 1 boincer umatlas     36322 Jan 15 11:39 runpilot2-wrapper.sh
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas       100 Jan 15 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:46:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 11:40 run_atlas
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas       105 Jan 15 11:40 job.xml
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas 593727306 Jan 15 11:40 EVNT.32794306._001848.pool.root.1
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas    597765 Jan 15 11:40 input.tar.gz
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 11:40 start_atlas.sh
[2026-01-15 12:46:01] drwxrwx--x 2 boincer umatlas      4096 Jan 15 11:40 shared
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas         0 Jan 15 11:40 boinc_lockfile
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas      2506 Jan 15 11:40 pandaJob.out
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas        57 Jan 15 11:40 setup.sh.local
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas   1004091 Jan 15 11:40 agis_schedconf.cvmfs.json
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas   1516246 Jan 15 11:40 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas       438 Jan 15 11:40 workernode_map.json
[2026-01-15 12:46:01] drwx------ 5 boincer umatlas      4096 Jan 15 11:40 pilot3
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas 144023331 Jan 15 12:45 HITS.48215263._052311.pool.root.1
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas      1047 Jan 15 12:45 memory_monitor_summary.json
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas       530 Jan 15 12:45 boinc_task_state.xml
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas      6034 Jan 15 12:45 init_data.xml
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas    315453 Jan 15 12:45 log.48215263._052311.job.log.tgz.1
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas      6403 Jan 15 12:45 heartbeat.json
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 12:45 boinc_mmap_file
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas        27 Jan 15 12:45 wrapper_checkpoint.txt
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas        95 Jan 15 12:46 pilot_heartbeat.json
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas       819 Jan 15 12:46 pilotlog.txt
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas    583775 Jan 15 12:46 log.48215263._052311.job.log.1
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas       357 Jan 15 12:46 output.list
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas       620 Jan 15 12:46 runtime_log
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas    921600 Jan 15 12:46 result.tar.gz
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas      9331 Jan 15 12:46 runtime_log.err
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas       655 Jan 15 12:46 mwmLDmuYf08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm09uKDmXzgpun.diag
[2026-01-15 12:46:01] -rw-r--r-- 1 boincer umatlas     21357 Jan 15 12:46 stderr.txt
[2026-01-15 12:46:01] HITS file was successfully produced:
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas 144023331 Jan 15 12:45 shared/HITS.pool.root.1
[2026-01-15 12:46:01]  *** Contents of shared directory: ***
[2026-01-15 12:46:01] total 721968
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas 593727306 Jan 15 11:40 ATLAS.root_0
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas    597765 Jan 15 11:40 input.tar.gz
[2026-01-15 12:46:01] -rw-r--r-- 2 boincer umatlas     15845 Jan 15 11:40 start_atlas.sh
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas 144023331 Jan 15 12:45 HITS.pool.root.1
[2026-01-15 12:46:01] -rw------- 1 boincer umatlas    921600 Jan 15 12:46 result.tar.gz
12:46:02 (3836): run_atlas exited; CPU time 28804.645651
12:46:02 (3836): called boinc_finish(0)

</stderr_txt>
]]>

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