Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:06:51 (35068): wrapper (7.7.26015): starting
13:06:51 (35068): wrapper: running run_atlas (--nthreads 4)
[2026-01-16 13:06:51] Arguments: --nthreads 4
[2026-01-16 13:06:51] Threads: 4
[2026-01-16 13:06:51] Checking for CVMFS
[2026-01-16 13:06:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 13:06:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 13:06:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 13:06:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 13:06:52] 2.13.3.0 1454662 1824 50444 155191 3 188 5407604 6144001 2733 130560 0 7050759 99.998 68929 92 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-16 13:06:52] CVMFS is ok
[2026-01-16 13:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 13:06:52] Checking for apptainer binary...
[2026-01-16 13:06:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 13:06:52] Running /usr/bin/apptainer --version
[2026-01-16 13:06:52] apptainer version 1.4.0
[2026-01-16 13:06:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 13:06:52] Zen
[2026-01-16 13:06:52] apptainer works
[2026-01-16 13:06:52] Set ATHENA_PROC_NUMBER=4
[2026-01-16 13:06:52] Set ATHENA_CORE_NUMBER=4
[2026-01-16 13:06:52] Starting ATLAS job with PandaID=6962015492
[2026-01-16 13:06:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 15:34:24]  *** The last 200 lines of the pilot log: ***
[2026-01-16 15:34:24] 2026-01-16 04:33:52,605 | INFO     | sum of square deviations: 746051197.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | sum of deviations: 2257866322.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | mean x: 1768533912.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | mean y: 2328160.656716418
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | intersect: -5350003118.6569195
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | chi2: 0.0010483374324392765
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | current chi2=0.0010483374324392765 (change=72.1931530553366 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,606 | INFO     | sum of square deviations: 665612480.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | sum of deviations: 1502646061.9999995
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | mean x: 1768534065.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | mean y: 2329587.03875969
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | intersect: -3990204850.2438784
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | chi2: 0.0003248534814381512
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | current chi2=0.0003248534814381512 (change=69.01250767300367 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,607 | INFO     | sum of square deviations: 591173875.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | sum of deviations: 1169185810.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | mean x: 1768534217.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | mean y: 2330268.2016129033
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | intersect: -3495363388.313098
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | chi2: 0.00023684473276807487
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | current chi2=0.00023684473276807487 (change=27.09182868549072 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,608 | INFO     | sum of square deviations: 522502820.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | sum of deviations: 886532947.0000001
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | mean x: 1768534370.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | mean y: 2330895.5546218487
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | intersect: -2998349535.0445633
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | chi2: 0.0001700953455245954
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | current chi2=0.0001700953455245954 (change=28.182761956898734 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,609 | INFO     | sum of square deviations: 459366752.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | sum of deviations: 660118881.0000001
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | mean x: 1768534522.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | mean y: 2331442.1403508773
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | intersect: -2539086768.14375
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | chi2: 0.00012247947076864715
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | current chi2=0.00012247947076864715 (change=27.993637691316543 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | sum of square deviations: 401533110.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,610 | INFO     | sum of deviations: 511168165.9999999
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | mean x: 1768534675.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | mean y: 2331832.0825688075
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | intersect: -2249085557.450155
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | chi2: 9.87797661797706e-05
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | current chi2=9.87797661797706e-05 (change=19.34994039420956 %)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | left removable region: 70
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | sum of square deviations: 97479037.0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | sum of deviations: 190418179.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | mean x: 1768535559.5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | mean y: 2332843.4264705884
[2026-01-16 15:34:24] 2026-01-16 04:33:52,611 | INFO     | intersect: -3452372208.912156
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | chi2: 3.447205826604766e-05
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | current memory leak: 1.95 B/s (using 68 data points, chi2=0.00)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | could have reported an average CPU frequency of 4105 MHz (8 samples)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | ..............................
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . Timing measurements:
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . get job = 0 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . initial setup = 5 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . payload setup = 4 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . stage-in = 0 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . payload execution = 8762 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . stage-out = 0 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,612 | INFO     | . log creation = 0 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,613 | INFO     | ..............................
[2026-01-16 15:34:24] 2026-01-16 04:33:52,677 | INFO     | 
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | job summary report
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | --------------------------------------------------
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | PanDA job id: 6962015492
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | task id: 47898826
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | errors: (none)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | pilot state: finished 
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | transexitcode: 0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | exeerrorcode: 0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | exeerrordiag: 
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | exitcode: 0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | exitmsg: OK
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | cpuconsumptiontime: 33713 s
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | nevents: 400
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | neventsw: 0
[2026-01-16 15:34:24] 2026-01-16 04:33:52,678 | INFO     | pid: 45475
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | pgrp: 45475
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | corecount: 4
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | event service: False
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | sizes: {0: 2283804, 1: 2284003, 4: 2284265, 11: 2284293, 8771: 2321583, 8773: 2321583, 8795: 2321905}
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | --------------------------------------------------
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | 
[2026-01-16 15:34:24] 2026-01-16 04:33:52,679 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/5
[2026-01-16 15:34:24] 2026-01-16 04:33:52,699 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,699 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,700 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 15:34:24] 2026-01-16 04:33:52,701 | INFO     | job 6962015492 has completed (purged errors)
[2026-01-16 15:34:24] 2026-01-16 04:33:52,701 | INFO     | overall cleanup function is called
[2026-01-16 15:34:24] 2026-01-16 04:33:53,704 | INFO     | --- collectZombieJob: --- 10, [45475]
[2026-01-16 15:34:24] 2026-01-16 04:33:53,704 | INFO     | zombie collector waiting for pid 45475
[2026-01-16 15:34:24] 2026-01-16 04:33:53,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 15:34:24] 2026-01-16 04:33:53,704 | INFO     | collected zombie processes
[2026-01-16 15:34:24] 2026-01-16 04:33:53,704 | INFO     | will attempt to kill all subprocesses of pid=45475
[2026-01-16 15:34:24] 2026-01-16 04:33:53,854 | INFO     | process IDs to be killed: [45475] (in reverse order)
[2026-01-16 15:34:24] 2026-01-16 04:33:53,913 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 15:34:24] 2026-01-16 04:33:53,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 15:34:24] 2026-01-16 04:33:53,917 | INFO     | did not find any defunct processes belonging to 45475
[2026-01-16 15:34:24] 2026-01-16 04:33:53,920 | INFO     | did not find any defunct processes belonging to 45475
[2026-01-16 15:34:24] 2026-01-16 04:33:53,921 | INFO     | ready for new job
[2026-01-16 15:34:24] 2026-01-16 04:33:53,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 15:34:24] 2026-01-16 04:33:53,922 | INFO     | ***************************************
[2026-01-16 15:34:24] 2026-01-16 04:33:53,922 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 15:34:24] 2026-01-16 04:33:53,922 | INFO     | ***************************************
[2026-01-16 15:34:24] 2026-01-16 04:33:53,922 | INFO     | 
[2026-01-16 15:34:24] 2026-01-16 04:33:53,923 | INFO     | architecture information:
[2026-01-16 15:34:24] 2026-01-16 04:33:53,924 | INFO     | executing command: cat /etc/os-release
[2026-01-16 15:34:24] 2026-01-16 04:33:53,938 | INFO     | cat /etc/os-release:
[2026-01-16 15:34:24] NAME="CentOS Linux"
[2026-01-16 15:34:24] VERSION="7 (Core)"
[2026-01-16 15:34:24] ID="centos"
[2026-01-16 15:34:24] ID_LIKE="rhel fedora"
[2026-01-16 15:34:24] VERSION_ID="7"
[2026-01-16 15:34:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 15:34:24] ANSI_COLOR="0;31"
[2026-01-16 15:34:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 15:34:24] HOME_URL="https://www.centos.org/"
[2026-01-16 15:34:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 15:34:24] 
[2026-01-16 15:34:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 15:34:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 15:34:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 15:34:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 15:34:24] 
[2026-01-16 15:34:24] 2026-01-16 04:33:53,939 | INFO     | ***************************************
[2026-01-16 15:34:24] 2026-01-16 04:33:54,442 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/5
[2026-01-16 15:34:24] 2026-01-16 04:33:54,457 | INFO     | sufficient remaining disk space (212994097152 B)
[2026-01-16 15:34:24] 2026-01-16 04:33:54,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 15:34:24] 2026-01-16 04:33:54,458 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 15:34:24] 2026-01-16 04:33:54,458 | INFO     | update_server=False
[2026-01-16 15:34:24] 2026-01-16 04:33:54,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 15:34:24] 2026-01-16 04:33:54,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 15:34:24] 2026-01-16 04:33:54,509 | INFO     | all data control threads have been joined
[2026-01-16 15:34:24] 2026-01-16 04:33:54,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 15:34:24] 2026-01-16 04:33:54,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 15:34:24] 2026-01-16 04:33:54,922 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-16 15:34:24] 2026-01-16 04:33:54,923 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-16 15:34:24] 2026-01-16 04:33:54,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 15:34:24] 2026-01-16 04:33:54,923 | INFO     | will abort loop
[2026-01-16 15:34:24] 2026-01-16 04:33:55,395 | INFO     | all job control threads have been joined
[2026-01-16 15:34:24] 2026-01-16 04:33:55,462 | INFO     | [job] retrieve thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:55,462 | INFO     | [job] queue monitor thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:55,512 | INFO     | [data] control thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:55,772 | INFO     | [job] validate thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:55,843 | INFO     | all payload control threads have been joined
[2026-01-16 15:34:24] 2026-01-16 04:33:55,927 | INFO     | [job] job monitor thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,147 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,241 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,386 | INFO     | [data] copytool_in thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,400 | INFO     | [job] control thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,441 | INFO     | [payload] failed_post thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,741 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,848 | INFO     | [payload] control thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:56,854 | INFO     | [data] copytool_out thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:57,004 | INFO     | [payload] validate_post thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:33:58,881 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:34:05,324 | INFO     | job.realtimelogging is not enabled
[2026-01-16 15:34:24] 2026-01-16 04:34:06,329 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 15:34:24] 2026-01-16 04:34:17,831 | INFO     | [monitor] cgroup control has ended
[2026-01-16 15:34:24] 2026-01-16 04:34:18,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130741762836288)>', '<ExcThread(monitor, started 130741136512768)>']
[2026-01-16 15:34:24] 2026-01-16 04:34:23,203 | INFO     | all workflow threads have been joined
[2026-01-16 15:34:24] 2026-01-16 04:34:23,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 15:34:24] 2026-01-16 04:34:23,236 | INFO     | traces error code: 0
[2026-01-16 15:34:24] 2026-01-16 04:34:23,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 15:34:24] 2026-01-16 04:34:24,220 | INFO     | PID=38875 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | INFO     | .. there are 4 such processes running
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | CRITICAL | thread 'MainThread' is not alive
[2026-01-16 15:34:24] 2026-01-16 04:34:24,221 | INFO     | [monitor] control thread has ended
[2026-01-16 15:34:24] 2026-01-16 04:34:24,310 [wrapper] ==== pilot stdout END ====
[2026-01-16 15:34:24] 2026-01-16 04:34:24,314 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 15:34:24] 2026-01-16 04:34:24,316 [wrapper] pilotpid: 38875
[2026-01-16 15:34:24] 2026-01-16 04:34:24,318 [wrapper] Pilot exit status: 0
[2026-01-16 15:34:24] 2026-01-16 04:34:24,326 [wrapper] pandaids: 6962015492
[2026-01-16 15:34:24] 2026-01-16 04:34:24,362 [wrapper] cleanup supervisor_pilot  157357 38876
[2026-01-16 15:34:24] 2026-01-16 04:34:24,366 [wrapper] Test setup, not cleaning
[2026-01-16 15:34:24] 2026-01-16 04:34:24,368 [wrapper] apfmon messages muted
[2026-01-16 15:34:24] 2026-01-16 04:34:24,370 [wrapper] ==== wrapper stdout END ====
[2026-01-16 15:34:24] 2026-01-16 04:34:24,372 [wrapper] ==== wrapper stderr END ====
[2026-01-16 15:34:24]  *** Error codes and diagnostics ***
[2026-01-16 15:34:24]     "exeErrorCode": 0,
[2026-01-16 15:34:24]     "exeErrorDiag": "",
[2026-01-16 15:34:24]     "pilotErrorCode": 0,
[2026-01-16 15:34:24]     "pilotErrorDiag": "",
[2026-01-16 15:34:24]  *** Listing of results directory ***
[2026-01-16 15:34:24] total 444540
[2026-01-16 15:34:24] -rw-r--r-- 1 michael michael    579449 Jan  8 02:25 pilot3.tar.gz
[2026-01-16 15:34:24] -rwx------ 1 michael michael     36322 Jan  8 02:31 runpilot2-wrapper.sh
[2026-01-16 15:34:24] -rw-r--r-- 1 michael michael      5112 Jan  8 02:31 queuedata.json
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael       100 Jan 16 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 15:34:24] -rwxr-xr-x 1 michael michael      7986 Jan 16 13:06 run_atlas
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael       105 Jan 16 13:06 job.xml
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael 225601235 Jan 16 13:06 EVNT.47898824._000368.pool.root.1
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael      9823 Jan 16 13:06 init_data.xml
[2026-01-16 15:34:24] drwxrwx--x 2 michael michael      4096 Jan 16 13:06 shared
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael    592391 Jan 16 13:06 input.tar.gz
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael     15847 Jan 16 13:06 start_atlas.sh
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael         0 Jan 16 13:06 boinc_lockfile
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael      2516 Jan 16 13:06 pandaJob.out
[2026-01-16 15:34:24] -rw------- 1 michael michael        50 Jan 16 13:06 setup.sh.local
[2026-01-16 15:34:24] -rw------- 1 michael michael   1004075 Jan 16 13:06 agis_schedconf.cvmfs.json
[2026-01-16 15:34:24] -rw------- 1 michael michael   1516246 Jan 16 13:07 agis_ddmendpoints.agis.ALL.json
[2026-01-16 15:34:24] drwx------ 5 michael michael      4096 Jan 16 13:07 pilot3
[2026-01-16 15:34:24] -rw------- 1 michael michael 222457273 Jan 16 15:33 HITS.47898826._008759.pool.root.1
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael       529 Jan 16 15:33 boinc_task_state.xml
[2026-01-16 15:34:24] -rw------- 1 michael michael      1021 Jan 16 15:33 memory_monitor_summary.json
[2026-01-16 15:34:24] -rw------- 1 michael michael        95 Jan 16 15:33 pilot_heartbeat.json
[2026-01-16 15:34:24] -rw------- 1 michael michael    316555 Jan 16 15:33 log.47898826._008759.job.log.tgz.1
[2026-01-16 15:34:24] -rw------- 1 michael michael      7719 Jan 16 15:33 heartbeat.json
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael      8192 Jan 16 15:34 boinc_mmap_file
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael        27 Jan 16 15:34 wrapper_checkpoint.txt
[2026-01-16 15:34:24] -rw------- 1 michael michael       890 Jan 16 15:34 pilotlog.txt
[2026-01-16 15:34:24] -rw------- 1 michael michael   1290052 Jan 16 15:34 log.47898826._008759.job.log.1
[2026-01-16 15:34:24] -rw------- 1 michael michael       357 Jan 16 15:34 output.list
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael       620 Jan 16 15:34 runtime_log
[2026-01-16 15:34:24] -rw------- 1 michael michael   1628160 Jan 16 15:34 result.tar.gz
[2026-01-16 15:34:24] -rw------- 1 michael michael       641 Jan 16 15:34 YHkKDmfgkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4AdKDmfPA5om.diag
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael      9445 Jan 16 15:34 runtime_log.err
[2026-01-16 15:34:24] -rw-rw-r-- 1 michael michael     20666 Jan 16 15:34 stderr.txt
[2026-01-16 15:34:24] HITS file was successfully produced:
[2026-01-16 15:34:24] -rw------- 1 michael michael 222457273 Jan 16 15:33 shared/HITS.pool.root.1
[2026-01-16 15:34:24]  *** Contents of shared directory: ***
[2026-01-16 15:34:24] total 439756
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael 225601235 Jan 16 13:06 ATLAS.root_0
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael    592391 Jan 16 13:06 input.tar.gz
[2026-01-16 15:34:24] -rw-r--r-- 2 michael michael     15847 Jan 16 13:06 start_atlas.sh
[2026-01-16 15:34:24] -rw------- 1 michael michael 222457273 Jan 16 15:33 HITS.pool.root.1
[2026-01-16 15:34:24] -rw------- 1 michael michael   1628160 Jan 16 15:34 result.tar.gz
15:34:26 (35068): run_atlas exited; CPU time 33807.496169
15:34:26 (35068): called boinc_finish(0)

</stderr_txt>
]]>

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