Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:22:37 (3917223): wrapper (7.7.26015): starting
00:22:37 (3917223): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 00:22:37] Arguments: --nthreads 12
[2026-01-16 00:22:37] Threads: 12
[2026-01-16 00:22:37] Checking for CVMFS
[2026-01-16 00:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 00:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 00:22:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 00:22:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 00:22:37] 2.13.3.0 8520 2119 131920 155189 0 24 40385913 46080001 13299 130560 0 17483137 99.812 7245981 27068 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-16 00:22:37] CVMFS is ok
[2026-01-16 00:22:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-16 00:22:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-16 00:22:37] Further information can be found at the LHC@home message board.
[2026-01-16 00:22:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 00:22:37] Checking for apptainer binary...
[2026-01-16 00:22:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 00:22:37] Running /usr/bin/apptainer --version
[2026-01-16 00:22:37] apptainer version 1.4.5-2.el9
[2026-01-16 00:22:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 00:22:37] mff2103.farm.particle.cz
[2026-01-16 00:22:37] apptainer works
[2026-01-16 00:22:37] Set ATHENA_PROC_NUMBER=12
[2026-01-16 00:22:37] Set ATHENA_CORE_NUMBER=12
[2026-01-16 00:22:37] Starting ATLAS job with PandaID=6970539346
[2026-01-16 00:22:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 01:23:35]  *** The last 200 lines of the pilot log: ***
[2026-01-16 01:23:35] 2026-01-16 00:15:05,274 | INFO     | monitor loop #219: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:05,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:05,617 | INFO     | time since job start (3132s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:07,624 | INFO     | time since job start (3134s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:07,778 | INFO     | monitor loop #220: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:07,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:09,631 | INFO     | time since job start (3136s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:10,282 | INFO     | monitor loop #221: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:10,282 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:11,637 | INFO     | time since job start (3138s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:11,637 | INFO     | 3139s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-16 01:23:35] 2026-01-16 00:15:12,788 | INFO     | monitor loop #222: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:12,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:13,644 | INFO     | time since job start (3140s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:15,296 | INFO     | monitor loop #223: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:15,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:15,651 | INFO     | time since job start (3142s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:17,657 | INFO     | time since job start (3144s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:17,801 | INFO     | monitor loop #224: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:17,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:19,664 | INFO     | time since job start (3146s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:20,309 | INFO     | monitor loop #225: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:20,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:21,671 | INFO     | time since job start (3148s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:22,814 | INFO     | monitor loop #226: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:22,814 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:23,678 | INFO     | time since job start (3150s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:25,293 | INFO     | PID=3927734 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 01:23:35] 2026-01-16 00:15:25,293 | INFO     | .. there are 17 such processes running
[2026-01-16 01:23:35] 2026-01-16 00:15:25,319 | INFO     | monitor loop #227: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:25,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:26,294 | INFO     | time since job start (3153s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:27,827 | INFO     | monitor loop #228: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:27,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:28,304 | INFO     | time since job start (3155s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,311 | INFO     | time since job start (3157s) is within the limit (349056.0s)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,336 | INFO     | monitor loop #229: job 0:6970539346 is in state 'finished'
[2026-01-16 01:23:35] 2026-01-16 00:15:30,336 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,916 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 01:23:35] 2026-01-16 00:15:30,935 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2755.7025625
[2026-01-16 01:23:35] 2026-01-16 00:15:30,957 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6970539346/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,958 | INFO     | extracted standard info from prmon json
[2026-01-16 01:23:35] 2026-01-16 00:15:30,958 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 01:23:35] 2026-01-16 00:15:30,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 01:23:35] 2026-01-16 00:15:30,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 01:23:35] 2026-01-16 00:15:30,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 01:23:35] 2026-01-16 00:15:30,960 | INFO     | fitting pss+swap vs Time
[2026-01-16 01:23:35] 2026-01-16 00:15:30,960 | INFO     | sum of square deviations: 26400495.0
[2026-01-16 01:23:35] 2026-01-16 00:15:30,960 | INFO     | sum of deviations: 665914734.9999999
[2026-01-16 01:23:35] 2026-01-16 00:15:30,960 | INFO     | mean x: 1768521026.5
[2026-01-16 01:23:35] 2026-01-16 00:15:30,965 | INFO     | mean y: 2809635.090909091
[2026-01-16 01:23:35] 2026-01-16 00:15:30,965 | INFO     | intersect: -44605604362.588875
[2026-01-16 01:23:35] 2026-01-16 00:15:30,965 | INFO     | chi2: 0.0004253881645210348
[2026-01-16 01:23:35] 2026-01-16 00:15:30,965 | INFO     | current memory leak: 25.22 B/s (using 44 data points, chi2=0.00)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | could have reported an average CPU frequency of 2746 MHz (5 samples)
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | ..............................
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . Timing measurements:
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . get job = 0 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . initial setup = 1 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . payload setup = 10 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . stage-in = 0 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,966 | INFO     | . payload execution = 3093 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,967 | INFO     | . stage-out = 1 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,967 | INFO     | . log creation = 0 s
[2026-01-16 01:23:35] 2026-01-16 00:15:30,967 | INFO     | ..............................
[2026-01-16 01:23:35] 2026-01-16 00:15:31,078 | INFO     | 
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | job summary report
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | --------------------------------------------------
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | PanDA job id: 6970539346
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | task id: 48215263
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | errors: (none)
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | pilot state: finished 
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | transexitcode: 0
[2026-01-16 01:23:35] 2026-01-16 00:15:31,079 | INFO     | exeerrorcode: 0
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | exeerrordiag: 
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | exitcode: 0
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | exitmsg: OK
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | cpuconsumptiontime: 25400 s
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | nevents: 400
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | neventsw: 0
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | pid: 3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | pgrp: 3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | corecount: 12
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | event service: False
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | sizes: {0: 2283953, 8: 2284215, 11: 2284243, 3107: 2309924, 3109: 2318924, 3110: 2319008, 3139: 2319362}
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | --------------------------------------------------
[2026-01-16 01:23:35] 2026-01-16 00:15:31,080 | INFO     | 
[2026-01-16 01:23:35] 2026-01-16 00:15:31,081 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2026-01-16 01:23:35] 2026-01-16 00:15:31,116 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,116 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,116 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,116 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | job 6970539346 has completed (purged errors)
[2026-01-16 01:23:35] 2026-01-16 00:15:31,118 | INFO     | overall cleanup function is called
[2026-01-16 01:23:35] 2026-01-16 00:15:32,129 | INFO     | --- collectZombieJob: --- 10, [3946919]
[2026-01-16 01:23:35] 2026-01-16 00:15:32,129 | INFO     | zombie collector waiting for pid 3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:32,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 01:23:35] 2026-01-16 00:15:32,129 | INFO     | collected zombie processes
[2026-01-16 01:23:35] 2026-01-16 00:15:32,129 | INFO     | will attempt to kill all subprocesses of pid=3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:32,592 | INFO     | process IDs to be killed: [3946919] (in reverse order)
[2026-01-16 01:23:35] 2026-01-16 00:15:32,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 01:23:35] 2026-01-16 00:15:32,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 01:23:35] 2026-01-16 00:15:32,979 | INFO     | did not find any defunct processes belonging to 3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:32,999 | INFO     | did not find any defunct processes belonging to 3946919
[2026-01-16 01:23:35] 2026-01-16 00:15:32,999 | INFO     | ready for new job
[2026-01-16 01:23:35] 2026-01-16 00:15:33,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 01:23:35] 2026-01-16 00:15:33,006 | INFO     | ***************************************
[2026-01-16 01:23:35] 2026-01-16 00:15:33,006 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 01:23:35] 2026-01-16 00:15:33,007 | INFO     | ***************************************
[2026-01-16 01:23:35] 2026-01-16 00:15:33,007 | INFO     | 
[2026-01-16 01:23:35] 2026-01-16 00:15:33,013 | INFO     | architecture information:
[2026-01-16 01:23:35] 2026-01-16 00:15:33,026 | INFO     | executing command: cat /etc/os-release
[2026-01-16 01:23:35] 2026-01-16 00:15:33,070 | INFO     | cat /etc/os-release:
[2026-01-16 01:23:35] NAME="CentOS Linux"
[2026-01-16 01:23:35] VERSION="7 (Core)"
[2026-01-16 01:23:35] ID="centos"
[2026-01-16 01:23:35] ID_LIKE="rhel fedora"
[2026-01-16 01:23:35] VERSION_ID="7"
[2026-01-16 01:23:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 01:23:35] ANSI_COLOR="0;31"
[2026-01-16 01:23:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 01:23:35] HOME_URL="https://www.centos.org/"
[2026-01-16 01:23:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 01:23:35] 
[2026-01-16 01:23:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 01:23:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 01:23:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 01:23:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 01:23:35] 
[2026-01-16 01:23:35] 2026-01-16 00:15:33,071 | INFO     | ***************************************
[2026-01-16 01:23:35] 2026-01-16 00:15:33,574 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-01-16 01:23:35] 2026-01-16 00:15:33,725 | INFO     | sufficient remaining disk space (1510647791616 B)
[2026-01-16 01:23:35] 2026-01-16 00:15:33,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 01:23:35] 2026-01-16 00:15:33,726 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 01:23:35] 2026-01-16 00:15:33,726 | INFO     | update_server=False
[2026-01-16 01:23:35] 2026-01-16 00:15:33,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 01:23:35] 2026-01-16 00:15:33,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 01:23:35] 2026-01-16 00:15:33,851 | INFO     | aborting loop
[2026-01-16 01:23:35] 2026-01-16 00:15:34,086 | INFO     | all job control threads have been joined
[2026-01-16 01:23:35] 2026-01-16 00:15:34,227 | INFO     | all data control threads have been joined
[2026-01-16 01:23:35] 2026-01-16 00:15:34,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 01:23:35] 2026-01-16 00:15:34,732 | INFO     | [job] retrieve thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:34,745 | INFO     | [payload] failed_post thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:34,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:34,857 | INFO     | [job] job monitor thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,040 | INFO     | all payload control threads have been joined
[2026-01-16 01:23:35] 2026-01-16 00:15:35,096 | INFO     | [job] control thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,153 | INFO     | [data] copytool_in thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,220 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,231 | INFO     | [job] validate thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,236 | INFO     | [data] control thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 01:23:35] 2026-01-16 00:15:35,491 | INFO     | [payload] validate_post thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,790 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:35,852 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:36,048 | INFO     | [payload] control thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:36,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 01:23:35] 2026-01-16 00:15:36,257 | INFO     | [data] copytool_out thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:37,102 | INFO     | [job] queue monitor thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:39,286 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 01:23:35] 2026-01-16 00:15:58,294 | INFO     | [monitor] cgroup control has ended
[2026-01-16 01:23:35] 2026-01-16 00:15:59,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910114703168)>', '<ExcThread(monitor, started 139909750839040)>']
[2026-01-16 01:23:35] 2026-01-16 00:16:03,848 | INFO     | PID=3927734 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 01:23:35] 2026-01-16 00:16:03,848 | INFO     | .. there are 17 such processes running
[2026-01-16 01:23:35] 2026-01-16 00:16:03,849 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 01:23:35] 2026-01-16 00:16:03,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 01:23:35] 2026-01-16 00:16:03,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 01:23:35] 2026-01-16 00:16:03,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 01:23:35] 2026-01-16 00:16:03,850 | INFO     | [monitor] control thread has ended
[2026-01-16 01:23:35] 2026-01-16 00:16:04,327 | INFO     | all workflow threads have been joined
[2026-01-16 01:23:35] 2026-01-16 00:16:04,327 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 01:23:35] 2026-01-16 00:16:04,327 | INFO     | traces error code: 0
[2026-01-16 01:23:35] 2026-01-16 00:16:04,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 01:23:35] 2026-01-16 00:16:04,709 [wrapper] ==== pilot stdout END ====
[2026-01-16 01:23:35] 2026-01-16 00:16:04,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 01:23:35] 2026-01-16 00:16:04,718 [wrapper] pilotpid: 3927734
[2026-01-16 01:23:35] 2026-01-16 00:16:04,722 [wrapper] Pilot exit status: 0
[2026-01-16 01:23:35] 2026-01-16 00:16:04,847 [wrapper] pandaids: 6970539346
[2026-01-16 01:23:35] 2026-01-16 00:16:04,986 [wrapper] cleanup supervisor_pilot 4049323 3927735
[2026-01-16 01:23:35] 2026-01-16 00:16:04,989 [wrapper] Test setup, not cleaning
[2026-01-16 01:23:35] 2026-01-16 00:16:05,006 [wrapper] apfmon messages muted
[2026-01-16 01:23:35] 2026-01-16 00:16:05,010 [wrapper] ==== wrapper stdout END ====
[2026-01-16 01:23:35] 2026-01-16 00:16:05,013 [wrapper] ==== wrapper stderr END ====
[2026-01-16 01:23:35]  *** Error codes and diagnostics ***
[2026-01-16 01:23:35]     "exeErrorCode": 0,
[2026-01-16 01:23:35]     "exeErrorDiag": "",
[2026-01-16 01:23:35]     "pilotErrorCode": 0,
[2026-01-16 01:23:35]     "pilotErrorDiag": "",
[2026-01-16 01:23:35]  *** Listing of results directory ***
[2026-01-16 01:23:35] total 736496
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc    579449 Jan 15 09:34 pilot3.tar.gz
[2026-01-16 01:23:35] -rwx------ 1 boinc boinc     36322 Jan 15 09:36 runpilot2-wrapper.sh
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc      5112 Jan 15 09:38 queuedata.json
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc       100 Jan 16 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 01:23:35] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 00:22 run_atlas
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc       105 Jan 16 00:22 job.xml
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc      6676 Jan 16 00:22 init_data.xml
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc 597162629 Jan 16 00:22 EVNT.32794306._001980.pool.root.1
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc     15847 Jan 16 00:22 start_atlas.sh
[2026-01-16 01:23:35] drwxrwx--x 2 boinc boinc      4096 Jan 16 00:22 shared
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc    592400 Jan 16 00:22 input.tar.gz
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc         0 Jan 16 00:22 boinc_lockfile
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc      2509 Jan 16 00:22 pandaJob.out
[2026-01-16 01:23:35] -rw------- 1 boinc boinc   1004091 Jan 16 00:22 agis_schedconf.cvmfs.json
[2026-01-16 01:23:35] -rw------- 1 boinc boinc   1516246 Jan 16 00:22 agis_ddmendpoints.agis.ALL.json
[2026-01-16 01:23:35] drwx------ 5 boinc boinc      4096 Jan 16 00:22 pilot3
[2026-01-16 01:23:35] -rw------- 1 boinc boinc 151417878 Jan 16 01:14 HITS.48215263._050956.pool.root.1
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc       529 Jan 16 01:14 boinc_task_state.xml
[2026-01-16 01:23:35] -rw------- 1 boinc boinc      1021 Jan 16 01:14 memory_monitor_summary.json
[2026-01-16 01:23:35] -rw------- 1 boinc boinc    356147 Jan 16 01:15 log.48215263._050956.job.log.tgz.1
[2026-01-16 01:23:35] -rw------- 1 boinc boinc      7774 Jan 16 01:15 heartbeat.json
[2026-01-16 01:23:35] -rw------- 1 boinc boinc        95 Jan 16 01:16 pilot_heartbeat.json
[2026-01-16 01:23:35] -rw------- 1 boinc boinc      4827 Jan 16 01:16 pilotlog.txt
[2026-01-16 01:23:35] -rw------- 1 boinc boinc    474438 Jan 16 01:16 log.48215263._050956.job.log.1
[2026-01-16 01:23:35] -rw------- 1 boinc boinc       357 Jan 16 01:16 output.list
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc       620 Jan 16 01:16 runtime_log
[2026-01-16 01:23:35] -rw------- 1 boinc boinc    849920 Jan 16 01:16 result.tar.gz
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc      8880 Jan 16 01:16 runtime_log.err
[2026-01-16 01:23:35] -rw------- 1 boinc boinc       662 Jan 16 01:16 dmyLDmC1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4XoKDm2V8EIm.diag
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc        25 Jan 16 01:23 wrapper_checkpoint.txt
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc      8192 Jan 16 01:23 boinc_mmap_file
[2026-01-16 01:23:35] -rw-r--r-- 1 boinc boinc     22397 Jan 16 01:23 stderr.txt
[2026-01-16 01:23:35] HITS file was successfully produced:
[2026-01-16 01:23:35] -rw------- 1 boinc boinc 151417878 Jan 16 01:14 shared/HITS.pool.root.1
[2026-01-16 01:23:35]  *** Contents of shared directory: ***
[2026-01-16 01:23:35] total 732476
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc 597162629 Jan 16 00:22 ATLAS.root_0
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc     15847 Jan 16 00:22 start_atlas.sh
[2026-01-16 01:23:35] -rw-r--r-- 2 boinc boinc    592400 Jan 16 00:22 input.tar.gz
[2026-01-16 01:23:35] -rw------- 1 boinc boinc 151417878 Jan 16 01:14 HITS.pool.root.1
[2026-01-16 01:23:35] -rw------- 1 boinc boinc    849920 Jan 16 01:16 result.tar.gz
01:23:37 (3917223): run_atlas exited; CPU time 25472.695886
01:23:37 (3917223): called boinc_finish(0)

</stderr_txt>
]]>

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