Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:05:45 (602914): wrapper (7.7.26015): starting
22:05:45 (602914): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 22:05:45] Arguments: --nthreads 12
[2026-01-15 22:05:45] Threads: 12
[2026-01-15 22:05:45] Checking for CVMFS
[2026-01-15 22:05:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:05:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:05:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:05:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:05:46] 2.13.3.0 9099 8985 227176 155184 1 280 38238091 46080001 10340 130560 0 51376587 99.779 27976998 27678 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 22:05:46] CVMFS is ok
[2026-01-15 22:05:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:05:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:05:46] Further information can be found at the LHC@home message board.
[2026-01-15 22:05:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:05:46] Checking for apptainer binary...
[2026-01-15 22:05:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:05:46] Running /usr/bin/apptainer --version
[2026-01-15 22:05:46] apptainer version 1.4.5-2.el9
[2026-01-15 22:05:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:05:46] mff2104.farm.particle.cz
[2026-01-15 22:05:46] apptainer works
[2026-01-15 22:05:46] Set ATHENA_PROC_NUMBER=12
[2026-01-15 22:05:46] Set ATHENA_CORE_NUMBER=12
[2026-01-15 22:05:46] Starting ATLAS job with PandaID=6970288051
[2026-01-15 22:05:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:50:09]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:50:09] 2026-01-15 21:49:02,350 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 22:50:09] 2026-01-15 21:49:02,350 | INFO     | summary of transferred files:
[2026-01-15 22:50:09] 2026-01-15 21:49:02,350 | INFO     |  -- lfn=log.48215263._044708.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 22:50:09] 2026-01-15 21:49:02,350 | INFO     | stage-out finished correctly
[2026-01-15 22:50:09] 2026-01-15 21:49:02,552 | INFO     | time since job start (2583s) is within the limit (349056.0s)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,705 | INFO     | PID=616991 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:50:09] 2026-01-15 21:49:04,705 | INFO     | .. there are 19 such processes running
[2026-01-15 22:50:09] 2026-01-15 21:49:04,751 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 22:50:09] 2026-01-15 21:49:04,851 | INFO     | job 6970288051 has state=finished
[2026-01-15 22:50:09] 2026-01-15 21:49:04,852 | INFO     | preparing for final server update for job 6970288051 in state='finished'
[2026-01-15 22:50:09] 2026-01-15 21:49:04,853 | INFO     | this job has now completed (state=finished)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,854 | INFO     | log transfer has been attempted: DONE
[2026-01-15 22:50:09] 2026-01-15 21:49:04,854 | INFO     | job 6970288051 has finished - writing final server update
[2026-01-15 22:50:09] 2026-01-15 21:49:04,855 | INFO     | total number of processed events: 400 (read)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,855 | INFO     | executing command: lscpu
[2026-01-15 22:50:09] 2026-01-15 21:49:04,890 | WARNING  | process 653716 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 22:50:09] 2026-01-15 21:49:04,890 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6970288051/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,892 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4597790 B
[2026-01-15 22:50:09] 2026-01-15 21:49:04,892 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15600 B
[2026-01-15 22:50:09] 2026-01-15 21:49:04,892 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-01-15 22:50:09] 2026-01-15 21:49:04,917 | INFO     | sufficient remaining disk space (1572447715328 B)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,918 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,918 | INFO     | size of work directory /scratch/.boinc/slots/0/PanDA_Pilot-6970288051: 4881708 B (within 4404019200 B limit)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,919 | INFO     | pfn file=/scratch/.boinc/slots/0/PanDA_Pilot-6970288051/HITS.48215263._044708.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,919 | INFO     | total size of present files: 0 B (workdir size: 4881708 B)
[2026-01-15 22:50:09] 2026-01-15 21:49:04,919 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/0/PanDA_Pilot-6970288051/HITS.48215263._044708.pool.root.1 since it does not exist
[2026-01-15 22:50:09] 2026-01-15 21:49:04,934 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 22:50:09] 2026-01-15 21:49:05,339 | INFO     | number of running child processes to parent process 653716: 1
[2026-01-15 22:50:09] 2026-01-15 21:49:05,340 | INFO     | maximum number of monitored processes: 6
[2026-01-15 22:50:09] 2026-01-15 21:49:05,707 | INFO     | time since job start (2586s) is within the limit (349056.0s)
[2026-01-15 22:50:09] 2026-01-15 21:49:07,713 | INFO     | time since job start (2588s) is within the limit (349056.0s)
[2026-01-15 22:50:09] 2026-01-15 21:49:07,844 | INFO     | monitor loop #184: job 0:6970288051 is in state 'finished'
[2026-01-15 22:50:09] 2026-01-15 21:49:07,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:50:09] 2026-01-15 21:49:09,719 | INFO     | time since job start (2590s) is within the limit (349056.0s)
[2026-01-15 22:50:09] 2026-01-15 21:49:10,349 | INFO     | monitor loop #185: job 0:6970288051 is in state 'finished'
[2026-01-15 22:50:09] 2026-01-15 21:49:10,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,016 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:50:09] 2026-01-15 21:49:11,029 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2850.4964583333335
[2026-01-15 22:50:09] 2026-01-15 21:49:11,046 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6970288051/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,047 | INFO     | extracted standard info from prmon json
[2026-01-15 22:50:09] 2026-01-15 21:49:11,047 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:50:09] 2026-01-15 21:49:11,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:50:09] 2026-01-15 21:49:11,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:50:09] 2026-01-15 21:49:11,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | sum of square deviations: 13283970.0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | sum of deviations: 51222554.00000001
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | mean x: 1768512532.0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | mean y: 2749388.8857142855
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | intersect: -6816577112.9090605
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | chi2: 0.0030891223508129825
[2026-01-15 22:50:09] 2026-01-15 21:49:11,049 | INFO     | current memory leak: 3.86 B/s (using 35 data points, chi2=0.00)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | could have reported an average CPU frequency of 2813 MHz (5 samples)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | ..............................
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . Timing measurements:
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . get job = 0 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . initial setup = 1 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . payload setup = 7 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . stage-in = 0 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . payload execution = 2553 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . stage-out = 0 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,050 | INFO     | . log creation = 0 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,051 | INFO     | ..............................
[2026-01-15 22:50:09] 2026-01-15 21:49:11,137 | INFO     | 
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | job summary report
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | --------------------------------------------------
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | PanDA job id: 6970288051
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | task id: 48215263
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | errors: (none)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | pilot state: finished 
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | transexitcode: 0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,138 | INFO     | exeerrorcode: 0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | exeerrordiag: 
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | exitcode: 0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | exitmsg: OK
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | cpuconsumptiontime: 24876 s
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | nevents: 400
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | neventsw: 0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | pid: 653716
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | pgrp: 653716
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | corecount: 12
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | event service: False
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | sizes: {0: 2283782, 1: 2283981, 6: 2284243, 11: 2284271, 2564: 2309572, 2565: 2309571, 2567: 2318755, 2569: 2318811, 2575: 2319129}
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | --------------------------------------------------
[2026-01-15 22:50:09] 2026-01-15 21:49:11,139 | INFO     | 
[2026-01-15 22:50:09] 2026-01-15 21:49:11,140 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-01-15 22:50:09] 2026-01-15 21:49:11,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:50:09] 2026-01-15 21:49:11,174 | INFO     | job 6970288051 has completed (purged errors)
[2026-01-15 22:50:09] 2026-01-15 21:49:11,174 | INFO     | overall cleanup function is called
[2026-01-15 22:50:09] 2026-01-15 21:49:12,184 | INFO     | --- collectZombieJob: --- 10, [653716]
[2026-01-15 22:50:09] 2026-01-15 21:49:12,184 | INFO     | zombie collector waiting for pid 653716
[2026-01-15 22:50:09] 2026-01-15 21:49:12,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:50:09] 2026-01-15 21:49:12,185 | INFO     | collected zombie processes
[2026-01-15 22:50:09] 2026-01-15 21:49:12,185 | INFO     | will attempt to kill all subprocesses of pid=653716
[2026-01-15 22:50:09] 2026-01-15 21:49:12,508 | INFO     | process IDs to be killed: [653716] (in reverse order)
[2026-01-15 22:50:09] 2026-01-15 21:49:12,650 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:50:09] 2026-01-15 21:49:12,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:50:09] 2026-01-15 21:49:12,663 | INFO     | did not find any defunct processes belonging to 653716
[2026-01-15 22:50:09] 2026-01-15 21:49:12,676 | INFO     | did not find any defunct processes belonging to 653716
[2026-01-15 22:50:09] 2026-01-15 21:49:12,676 | INFO     | ready for new job
[2026-01-15 22:50:09] 2026-01-15 21:49:12,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:50:09] 2026-01-15 21:49:12,678 | INFO     | ***************************************
[2026-01-15 22:50:09] 2026-01-15 21:49:12,678 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:50:09] 2026-01-15 21:49:12,678 | INFO     | ***************************************
[2026-01-15 22:50:09] 2026-01-15 21:49:12,678 | INFO     | 
[2026-01-15 22:50:09] 2026-01-15 21:49:12,684 | INFO     | architecture information:
[2026-01-15 22:50:09] 2026-01-15 21:49:12,684 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:50:09] 2026-01-15 21:49:12,706 | INFO     | cat /etc/os-release:
[2026-01-15 22:50:09] NAME="CentOS Linux"
[2026-01-15 22:50:09] VERSION="7 (Core)"
[2026-01-15 22:50:09] ID="centos"
[2026-01-15 22:50:09] ID_LIKE="rhel fedora"
[2026-01-15 22:50:09] VERSION_ID="7"
[2026-01-15 22:50:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:50:09] ANSI_COLOR="0;31"
[2026-01-15 22:50:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:50:09] HOME_URL="https://www.centos.org/"
[2026-01-15 22:50:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:50:09] 
[2026-01-15 22:50:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:50:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:50:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:50:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:50:09] 
[2026-01-15 22:50:09] 2026-01-15 21:49:12,706 | INFO     | ***************************************
[2026-01-15 22:50:09] 2026-01-15 21:49:13,210 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-01-15 22:50:09] 2026-01-15 21:49:13,235 | INFO     | sufficient remaining disk space (1572447715328 B)
[2026-01-15 22:50:09] 2026-01-15 21:49:13,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:50:09] 2026-01-15 21:49:13,235 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:50:09] 2026-01-15 21:49:13,235 | INFO     | update_server=False
[2026-01-15 22:50:09] 2026-01-15 21:49:13,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:50:09] 2026-01-15 21:49:13,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:50:09] 2026-01-15 21:49:13,309 | INFO     | all data control threads have been joined
[2026-01-15 22:50:09] 2026-01-15 21:49:13,705 | INFO     | all job control threads have been joined
[2026-01-15 22:50:09] 2026-01-15 21:49:13,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:50:09] 2026-01-15 21:49:13,860 | INFO     | aborting loop
[2026-01-15 22:50:09] 2026-01-15 21:49:14,241 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,315 | INFO     | [data] control thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,523 | INFO     | [job] validate thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,576 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,634 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,678 | INFO     | all payload control threads have been joined
[2026-01-15 22:50:09] 2026-01-15 21:49:14,711 | INFO     | [job] control thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,865 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:14,935 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:15,026 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:15,241 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:15,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:50:09] 2026-01-15 21:49:15,381 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:15,683 | INFO     | [payload] control thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:15,703 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:16,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:50:09] 2026-01-15 21:49:17,157 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:19,370 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:23,861 | INFO     | job.realtimelogging is not enabled
[2026-01-15 22:50:09] 2026-01-15 21:49:24,866 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:50:09] 2026-01-15 21:49:43,332 | INFO     | PID=616991 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 22:50:09] 2026-01-15 21:49:43,333 | INFO     | .. there are 19 such processes running
[2026-01-15 22:50:09] 2026-01-15 21:49:43,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:50:09] 2026-01-15 21:49:43,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:50:09] 2026-01-15 21:49:43,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:50:09] 2026-01-15 21:50:02,826 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:50:09] 2026-01-15 21:50:04,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461006694208)>', '<ExcThread(monitor, started 140460647503616)>']
[2026-01-15 22:50:09] 2026-01-15 21:50:04,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:50:09] 2026-01-15 21:50:04,441 | INFO     | [monitor] control thread has ended
[2026-01-15 22:50:09] 2026-01-15 21:50:09,096 | INFO     | all workflow threads have been joined
[2026-01-15 22:50:09] 2026-01-15 21:50:09,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:50:09] 2026-01-15 21:50:09,096 | INFO     | traces error code: 0
[2026-01-15 22:50:09] 2026-01-15 21:50:09,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:50:09] 2026-01-15 21:50:09,323 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:50:09] 2026-01-15 21:50:09,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:50:09] 2026-01-15 21:50:09,330 [wrapper] pilotpid: 616991
[2026-01-15 22:50:09] 2026-01-15 21:50:09,335 [wrapper] Pilot exit status: 0
[2026-01-15 22:50:09] 2026-01-15 21:50:09,347 [wrapper] pandaids: 6970288051
[2026-01-15 22:50:09] 2026-01-15 21:50:09,478 [wrapper] cleanup supervisor_pilot  699116 616993
[2026-01-15 22:50:09] 2026-01-15 21:50:09,481 [wrapper] Test setup, not cleaning
[2026-01-15 22:50:09] 2026-01-15 21:50:09,485 [wrapper] apfmon messages muted
[2026-01-15 22:50:09] 2026-01-15 21:50:09,490 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:50:09] 2026-01-15 21:50:09,494 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:50:09]  *** Error codes and diagnostics ***
[2026-01-15 22:50:09]     "exeErrorCode": 0,
[2026-01-15 22:50:09]     "exeErrorDiag": "",
[2026-01-15 22:50:09]     "pilotErrorCode": 0,
[2026-01-15 22:50:09]     "pilotErrorDiag": "",
[2026-01-15 22:50:09]  *** Listing of results directory ***
[2026-01-15 22:50:09] total 732368
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc    579449 Jan 15 05:50 pilot3.tar.gz
[2026-01-15 22:50:09] -rwx------ 1 boinc boinc     36322 Jan 15 05:53 runpilot2-wrapper.sh
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc      5112 Jan 15 05:54 queuedata.json
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc       100 Jan 15 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:50:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 22:05 run_atlas
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc       105 Jan 15 22:05 job.xml
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc 592330740 Jan 15 22:05 EVNT.32794306._001740.pool.root.1
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc      6676 Jan 15 22:05 init_data.xml
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:05 start_atlas.sh
[2026-01-15 22:50:09] drwxrwx--x 2 boinc boinc      4096 Jan 15 22:05 shared
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc    592408 Jan 15 22:05 input.tar.gz
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc         0 Jan 15 22:05 boinc_lockfile
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc      2509 Jan 15 22:05 pandaJob.out
[2026-01-15 22:50:09] -rw------- 1 boinc boinc   1004075 Jan 15 22:05 agis_schedconf.cvmfs.json
[2026-01-15 22:50:09] -rw------- 1 boinc boinc   1516246 Jan 15 22:05 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:50:09] drwx------ 5 boinc boinc      4096 Jan 15 22:05 pilot3
[2026-01-15 22:50:09] -rw------- 1 boinc boinc 152148512 Jan 15 22:48 HITS.48215263._044708.pool.root.1
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc       527 Jan 15 22:48 boinc_task_state.xml
[2026-01-15 22:50:09] -rw------- 1 boinc boinc      1033 Jan 15 22:48 memory_monitor_summary.json
[2026-01-15 22:50:09] -rw------- 1 boinc boinc    367822 Jan 15 22:49 log.48215263._044708.job.log.tgz.1
[2026-01-15 22:50:09] -rw------- 1 boinc boinc      7775 Jan 15 22:49 heartbeat.json
[2026-01-15 22:50:09] -rw------- 1 boinc boinc        95 Jan 15 22:49 pilot_heartbeat.json
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:50 boinc_mmap_file
[2026-01-15 22:50:09] -rw------- 1 boinc boinc      4898 Jan 15 22:50 pilotlog.txt
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc        27 Jan 15 22:50 wrapper_checkpoint.txt
[2026-01-15 22:50:09] -rw------- 1 boinc boinc    398558 Jan 15 22:50 log.48215263._044708.job.log.1
[2026-01-15 22:50:09] -rw------- 1 boinc boinc       357 Jan 15 22:50 output.list
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc       620 Jan 15 22:50 runtime_log
[2026-01-15 22:50:09] -rw------- 1 boinc boinc    788480 Jan 15 22:50 result.tar.gz
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc      8880 Jan 15 22:50 runtime_log.err
[2026-01-15 22:50:09] -rw------- 1 boinc boinc       663 Jan 15 22:50 lETMDmrXU08n9Rq4apOajLDm4fhM0noT9bVo0NGKDma2nKDmr1SBun.diag
[2026-01-15 22:50:09] -rw-r--r-- 1 boinc boinc     22569 Jan 15 22:50 stderr.txt
[2026-01-15 22:50:09] HITS file was successfully produced:
[2026-01-15 22:50:09] -rw------- 1 boinc boinc 152148512 Jan 15 22:48 shared/HITS.pool.root.1
[2026-01-15 22:50:09]  *** Contents of shared directory: ***
[2026-01-15 22:50:09] total 728408
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc 592330740 Jan 15 22:05 ATLAS.root_0
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:05 start_atlas.sh
[2026-01-15 22:50:09] -rw-r--r-- 2 boinc boinc    592408 Jan 15 22:05 input.tar.gz
[2026-01-15 22:50:09] -rw------- 1 boinc boinc 152148512 Jan 15 22:48 HITS.pool.root.1
[2026-01-15 22:50:09] -rw------- 1 boinc boinc    788480 Jan 15 22:50 result.tar.gz
22:50:11 (602914): run_atlas exited; CPU time 24922.627767
22:50:11 (602914): called boinc_finish(0)

</stderr_txt>
]]>

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