Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:24:00 (272150): wrapper (7.7.26015): starting
20:24:00 (272150): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 20:24:00] Arguments: --nthreads 12
[2026-01-15 20:24:00] Threads: 12
[2026-01-15 20:24:00] Checking for CVMFS
[2026-01-15 20:24:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 20:24:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 20:24:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 20:24:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 20:24:01] 2.13.3.0 9099 8883 232040 155181 3 430 36986053 46080000 12645 130560 0 50806614 99.769 27548185 27784 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 20:24:01] CVMFS is ok
[2026-01-15 20:24:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 20:24:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 20:24:01] Further information can be found at the LHC@home message board.
[2026-01-15 20:24:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 20:24:01] Checking for apptainer binary...
[2026-01-15 20:24:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 20:24:01] Running /usr/bin/apptainer --version
[2026-01-15 20:24:01] apptainer version 1.4.5-2.el9
[2026-01-15 20:24:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 20:24:01] mff2104.farm.particle.cz
[2026-01-15 20:24:01] apptainer works
[2026-01-15 20:24:01] Set ATHENA_PROC_NUMBER=12
[2026-01-15 20:24:01] Set ATHENA_CORE_NUMBER=12
[2026-01-15 20:24:01] Starting ATLAS job with PandaID=6970539119
[2026-01-15 20:24:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:05:33]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:05:33]  workdir=None
[2026-01-15 22:05:33] ]
[2026-01-15 22:05:33] 2026-01-15 20:34:43,853 | INFO     | transferring file log.48215263._050729.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6970539119/log.48215263._050729.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-15 22:05:33] 2026-01-15 20:34:43,853 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6970539119/log.48215263._050729.job.log.tgz.1 /scratch/.boinc/slots/5/log.48215263._050729.j
[2026-01-15 22:05:33] 2026-01-15 20:34:43,890 | INFO     | adding to output.list: log.48215263._050729.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/f6/log.48215263._050729.job.log.tg
[2026-01-15 22:05:33] 2026-01-15 20:34:43,891 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 22:05:33] 2026-01-15 20:34:43,891 | INFO     | summary of transferred files:
[2026-01-15 22:05:33] 2026-01-15 20:34:43,891 | INFO     |  -- lfn=log.48215263._050729.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 22:05:33] 2026-01-15 20:34:43,891 | INFO     | stage-out finished correctly
[2026-01-15 22:05:33] 2026-01-15 20:34:44,323 | WARNING  | process 331010 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 22:05:33] 2026-01-15 20:34:44,323 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6970539119/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:05:33] 2026-01-15 20:34:44,735 | INFO     | number of running child processes to parent process 331010: 1
[2026-01-15 22:05:33] 2026-01-15 20:34:44,735 | INFO     | maximum number of monitored processes: 6
[2026-01-15 22:05:33] 2026-01-15 20:34:44,759 | INFO     | time since job start (4229s) is within the limit (349056.0s)
[2026-01-15 22:05:33] 2026-01-15 20:34:46,183 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 22:05:33] 2026-01-15 20:34:46,765 | INFO     | time since job start (4231s) is within the limit (349056.0s)
[2026-01-15 22:05:33] 2026-01-15 20:34:47,239 | INFO     | monitor loop #286: job 0:6970539119 is in state 'finished'
[2026-01-15 22:05:33] 2026-01-15 20:34:47,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:05:33] 2026-01-15 20:34:48,226 | INFO     | PID=293659 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:05:33] 2026-01-15 20:34:48,226 | INFO     | .. there are 17 such processes running
[2026-01-15 22:05:33] 2026-01-15 20:34:48,585 | INFO     | job 6970539119 has state=finished
[2026-01-15 22:05:33] 2026-01-15 20:34:48,585 | INFO     | preparing for final server update for job 6970539119 in state='finished'
[2026-01-15 22:05:33] 2026-01-15 20:34:48,586 | INFO     | this job has now completed (state=finished)
[2026-01-15 22:05:33] 2026-01-15 20:34:48,586 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 22:05:33] 2026-01-15 20:34:48,586 | INFO     | log transfer has been attempted: DONE
[2026-01-15 22:05:33] 2026-01-15 20:34:48,586 | INFO     | job 6970539119 has finished - writing final server update
[2026-01-15 22:05:33] 2026-01-15 20:34:48,586 | INFO     | total number of processed events: 400 (read)
[2026-01-15 22:05:33] 2026-01-15 20:34:48,593 | INFO     | executing command: lscpu
[2026-01-15 22:05:33] 2026-01-15 20:34:48,672 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 22:05:33] 2026-01-15 20:34:49,227 | INFO     | time since job start (4234s) is within the limit (349056.0s)
[2026-01-15 22:05:33] 2026-01-15 20:34:49,743 | INFO     | monitor loop #287: job 0:6970539119 is in state 'finished'
[2026-01-15 22:05:33] 2026-01-15 20:34:49,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:05:33] 2026-01-15 20:34:51,232 | INFO     | time since job start (4236s) is within the limit (349056.0s)
[2026-01-15 22:05:33] 2026-01-15 20:34:52,246 | INFO     | monitor loop #288: job 0:6970539119 is in state 'finished'
[2026-01-15 22:05:33] 2026-01-15 20:34:52,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:05:33] 2026-01-15 20:34:53,237 | INFO     | time since job start (4238s) is within the limit (349056.0s)
[2026-01-15 22:05:33] 2026-01-15 20:34:54,750 | INFO     | monitor loop #289: job 0:6970539119 is in state 'finished'
[2026-01-15 22:05:33] 2026-01-15 20:34:54,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,010 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:05:33] 2026-01-15 20:34:55,022 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2783.867864583333
[2026-01-15 22:05:33] 2026-01-15 20:34:55,036 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6970539119/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,037 | INFO     | extracted standard info from prmon json
[2026-01-15 22:05:33] 2026-01-15 20:34:55,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:05:33] 2026-01-15 20:34:55,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:05:33] 2026-01-15 20:34:55,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:05:33] 2026-01-15 20:34:55,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:05:33] 2026-01-15 20:34:55,039 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:05:33] 2026-01-15 20:34:55,039 | INFO     | sum of square deviations: 73880791.48387094
[2026-01-15 22:05:33] 2026-01-15 20:34:55,039 | INFO     | sum of deviations: 14120187.096774168
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | mean x: 1768507253.516129
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | mean y: 2733885.4032258065
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | intersect: -335265380.7132123
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | chi2: 0.0023395182048590885
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | current memory leak: 0.19 B/s (using 62 data points, chi2=0.00)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | could have reported an average CPU frequency of 2774 MHz (6 samples)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | ..............................
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | . Timing measurements:
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | . get job = 0 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | . initial setup = 1 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | . payload setup = 8 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,040 | INFO     | . stage-in = 0 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,041 | INFO     | . payload execution = 4197 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,041 | INFO     | . stage-out = 0 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,041 | INFO     | . log creation = 0 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,041 | INFO     | ..............................
[2026-01-15 22:05:33] 2026-01-15 20:34:55,116 | INFO     | 
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | job summary report
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | --------------------------------------------------
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | PanDA job id: 6970539119
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | task id: 48215263
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | errors: (none)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | pilot state: finished 
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | transexitcode: 0
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | exeerrorcode: 0
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | exeerrordiag: 
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | exitcode: 0
[2026-01-15 22:05:33] 2026-01-15 20:34:55,117 | INFO     | exitmsg: OK
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | cpuconsumptiontime: 25458 s
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | nevents: 400
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | neventsw: 0
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | pid: 331010
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | pgrp: 331010
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | corecount: 12
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | event service: False
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | sizes: {0: 2283726, 1: 2283981, 7: 2284243, 12: 2284271, 4209: 2310355, 4211: 2319355, 4213: 2319539, 4222: 2319733}
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | --------------------------------------------------
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | 
[2026-01-15 22:05:33] 2026-01-15 20:34:55,118 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-01-15 22:05:33] 2026-01-15 20:34:55,145 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | job 6970539119 has completed (purged errors)
[2026-01-15 22:05:33] 2026-01-15 20:34:55,147 | INFO     | overall cleanup function is called
[2026-01-15 22:05:33] 2026-01-15 20:34:56,156 | INFO     | --- collectZombieJob: --- 10, [331010]
[2026-01-15 22:05:33] 2026-01-15 20:34:56,156 | INFO     | zombie collector waiting for pid 331010
[2026-01-15 22:05:33] 2026-01-15 20:34:56,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:05:33] 2026-01-15 20:34:56,156 | INFO     | collected zombie processes
[2026-01-15 22:05:33] 2026-01-15 20:34:56,156 | INFO     | will attempt to kill all subprocesses of pid=331010
[2026-01-15 22:05:33] 2026-01-15 20:34:56,562 | INFO     | process IDs to be killed: [331010] (in reverse order)
[2026-01-15 22:05:33] 2026-01-15 20:34:56,707 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:05:33] 2026-01-15 20:34:56,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:05:33] 2026-01-15 20:34:56,723 | INFO     | did not find any defunct processes belonging to 331010
[2026-01-15 22:05:33] 2026-01-15 20:34:56,739 | INFO     | did not find any defunct processes belonging to 331010
[2026-01-15 22:05:33] 2026-01-15 20:34:56,739 | INFO     | ready for new job
[2026-01-15 22:05:33] 2026-01-15 20:34:56,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:05:33] 2026-01-15 20:34:56,742 | INFO     | ***************************************
[2026-01-15 22:05:33] 2026-01-15 20:34:56,742 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:05:33] 2026-01-15 20:34:56,742 | INFO     | ***************************************
[2026-01-15 22:05:33] 2026-01-15 20:34:56,742 | INFO     | 
[2026-01-15 22:05:33] 2026-01-15 20:34:56,749 | INFO     | architecture information:
[2026-01-15 22:05:33] 2026-01-15 20:34:56,749 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:05:33] 2026-01-15 20:34:56,770 | INFO     | cat /etc/os-release:
[2026-01-15 22:05:33] NAME="CentOS Linux"
[2026-01-15 22:05:33] VERSION="7 (Core)"
[2026-01-15 22:05:33] ID="centos"
[2026-01-15 22:05:33] ID_LIKE="rhel fedora"
[2026-01-15 22:05:33] VERSION_ID="7"
[2026-01-15 22:05:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:05:33] ANSI_COLOR="0;31"
[2026-01-15 22:05:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:05:33] HOME_URL="https://www.centos.org/"
[2026-01-15 22:05:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:05:33] 
[2026-01-15 22:05:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:05:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:05:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:05:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:05:33] 
[2026-01-15 22:05:33] 2026-01-15 20:34:56,771 | INFO     | ***************************************
[2026-01-15 22:05:33] 2026-01-15 20:34:57,273 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-01-15 22:05:33] 2026-01-15 20:34:57,294 | INFO     | sufficient remaining disk space (1509455560704 B)
[2026-01-15 22:05:33] 2026-01-15 20:34:57,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:05:33] 2026-01-15 20:34:57,294 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:05:33] 2026-01-15 20:34:57,294 | INFO     | update_server=False
[2026-01-15 22:05:33] 2026-01-15 20:34:57,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:05:33] 2026-01-15 20:34:57,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:05:33] 2026-01-15 20:34:57,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:05:33] 2026-01-15 20:34:58,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:05:33] 2026-01-15 20:34:58,263 | INFO     | aborting loop
[2026-01-15 22:05:33] 2026-01-15 20:34:58,301 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:58,390 | INFO     | all data control threads have been joined
[2026-01-15 22:05:33] 2026-01-15 20:34:58,392 | INFO     | all payload control threads have been joined
[2026-01-15 22:05:33] 2026-01-15 20:34:58,484 | INFO     | all job control threads have been joined
[2026-01-15 22:05:33] 2026-01-15 20:34:58,520 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:58,763 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,239 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,269 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,301 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,385 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,396 | INFO     | [data] control thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,400 | INFO     | [payload] control thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,489 | INFO     | [job] control thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,505 | INFO     | [job] validate thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,723 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,742 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:34:59,753 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:35:00,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:05:33] 2026-01-15 20:35:01,132 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:35:01,302 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:05:33] 2026-01-15 20:35:21,784 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:05:33] 2026-01-15 20:35:22,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914587133760)>', '<ExcThread(monitor, started 139914230347520)>']
[2026-01-15 22:05:33] 2026-01-15 20:35:26,645 | INFO     | PID=293659 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 22:05:33] 2026-01-15 20:35:26,645 | INFO     | .. there are 17 such processes running
[2026-01-15 22:05:33] 2026-01-15 20:35:26,646 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:05:33] 2026-01-15 20:35:26,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:05:33] 2026-01-15 20:35:26,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:05:33] 2026-01-15 20:35:26,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:05:33] 2026-01-15 20:35:26,648 | INFO     | [monitor] control thread has ended
[2026-01-15 22:05:33] 2026-01-15 20:35:27,688 | INFO     | all workflow threads have been joined
[2026-01-15 22:05:33] 2026-01-15 20:35:27,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:05:33] 2026-01-15 20:35:27,689 | INFO     | traces error code: 0
[2026-01-15 22:05:33] 2026-01-15 20:35:27,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:05:33] 2026-01-15 20:35:27,847 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:05:33] 2026-01-15 20:35:27,851 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:05:33] 2026-01-15 20:35:27,855 [wrapper] pilotpid: 293659
[2026-01-15 22:05:33] 2026-01-15 20:35:27,859 [wrapper] Pilot exit status: 0
[2026-01-15 22:05:33] 2026-01-15 20:35:27,876 [wrapper] pandaids: 6970539119
[2026-01-15 22:05:33] 2026-01-15 20:35:27,975 [wrapper] cleanup supervisor_pilot  504084 293660
[2026-01-15 22:05:33] 2026-01-15 20:35:27,980 [wrapper] Test setup, not cleaning
[2026-01-15 22:05:33] 2026-01-15 20:35:27,984 [wrapper] apfmon messages muted
[2026-01-15 22:05:33] 2026-01-15 20:35:27,988 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:05:33] 2026-01-15 20:35:27,991 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:05:33]  *** Error codes and diagnostics ***
[2026-01-15 22:05:33]     "exeErrorCode": 0,
[2026-01-15 22:05:33]     "exeErrorDiag": "",
[2026-01-15 22:05:33]     "pilotErrorCode": 0,
[2026-01-15 22:05:33]     "pilotErrorDiag": "",
[2026-01-15 22:05:33]  *** Listing of results directory ***
[2026-01-15 22:05:33] total 738460
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc    579449 Jan 15 09:34 pilot3.tar.gz
[2026-01-15 22:05:33] -rwx------ 1 boinc boinc     36322 Jan 15 09:36 runpilot2-wrapper.sh
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc      5112 Jan 15 09:38 queuedata.json
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc       100 Jan 15 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:05:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 20:23 run_atlas
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc       105 Jan 15 20:23 job.xml
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc      6676 Jan 15 20:24 init_data.xml
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc 596920387 Jan 15 20:24 EVNT.32794306._001971.pool.root.1
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc     15847 Jan 15 20:24 start_atlas.sh
[2026-01-15 22:05:33] drwxrwx--x 2 boinc boinc      4096 Jan 15 20:24 shared
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc    592403 Jan 15 20:24 input.tar.gz
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc         0 Jan 15 20:24 boinc_lockfile
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc      2509 Jan 15 20:24 pandaJob.out
[2026-01-15 22:05:33] -rw------- 1 boinc boinc   1004083 Jan 15 20:24 agis_schedconf.cvmfs.json
[2026-01-15 22:05:33] -rw------- 1 boinc boinc   1516246 Jan 15 20:24 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:05:33] drwx------ 5 boinc boinc      4096 Jan 15 20:24 pilot3
[2026-01-15 22:05:33] -rw------- 1 boinc boinc 153380448 Jan 15 21:34 HITS.48215263._050729.pool.root.1
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc       530 Jan 15 21:34 boinc_task_state.xml
[2026-01-15 22:05:33] -rw------- 1 boinc boinc      1040 Jan 15 21:34 memory_monitor_summary.json
[2026-01-15 22:05:33] -rw------- 1 boinc boinc    367670 Jan 15 21:34 log.48215263._050729.job.log.tgz.1
[2026-01-15 22:05:33] -rw------- 1 boinc boinc      7772 Jan 15 21:34 heartbeat.json
[2026-01-15 22:05:33] -rw------- 1 boinc boinc        95 Jan 15 21:35 pilot_heartbeat.json
[2026-01-15 22:05:33] -rw------- 1 boinc boinc      4826 Jan 15 21:35 pilotlog.txt
[2026-01-15 22:05:33] -rw------- 1 boinc boinc    609215 Jan 15 21:35 log.48215263._050729.job.log.1
[2026-01-15 22:05:33] -rw------- 1 boinc boinc       357 Jan 15 21:35 output.list
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc       620 Jan 15 21:35 runtime_log
[2026-01-15 22:05:33] -rw------- 1 boinc boinc    993280 Jan 15 21:35 result.tar.gz
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc      8880 Jan 15 21:35 runtime_log.err
[2026-01-15 22:05:33] -rw------- 1 boinc boinc       663 Jan 15 21:35 KZgNDm00X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNXoKDmzkB88m.diag
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc        26 Jan 15 22:05 wrapper_checkpoint.txt
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:05 boinc_mmap_file
[2026-01-15 22:05:33] -rw-r--r-- 1 boinc boinc     22485 Jan 15 22:05 stderr.txt
[2026-01-15 22:05:33] HITS file was successfully produced:
[2026-01-15 22:05:33] -rw------- 1 boinc boinc 153380448 Jan 15 21:34 shared/HITS.pool.root.1
[2026-01-15 22:05:33]  *** Contents of shared directory: ***
[2026-01-15 22:05:33] total 734296
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc 596920387 Jan 15 20:24 ATLAS.root_0
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc     15847 Jan 15 20:24 start_atlas.sh
[2026-01-15 22:05:33] -rw-r--r-- 2 boinc boinc    592403 Jan 15 20:24 input.tar.gz
[2026-01-15 22:05:33] -rw------- 1 boinc boinc 153380448 Jan 15 21:34 HITS.pool.root.1
[2026-01-15 22:05:33] -rw------- 1 boinc boinc    993280 Jan 15 21:35 result.tar.gz
22:05:35 (272150): run_atlas exited; CPU time 25557.234634
22:05:35 (272150): called boinc_finish(0)

</stderr_txt>
]]>

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