Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:05:43 (600790): wrapper (7.7.26015): starting
22:05:43 (600790): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 22:05:43] Arguments: --nthreads 12
[2026-01-15 22:05:43] Threads: 12
[2026-01-15 22:05:43] Checking for CVMFS
[2026-01-15 22:05:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:05:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:05:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:05:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:05:44] 2.13.3.0 9099 8985 227208 155184 1 280 38238091 46080001 10318 130560 0 51370769 99.779 27976998 27678 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 22:05:44] CVMFS is ok
[2026-01-15 22:05:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:05:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:05:44] Further information can be found at the LHC@home message board.
[2026-01-15 22:05:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:05:44] Checking for apptainer binary...
[2026-01-15 22:05:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:05:44] Running /usr/bin/apptainer --version
[2026-01-15 22:05:44] apptainer version 1.4.5-2.el9
[2026-01-15 22:05:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:05:44] mff2104.farm.particle.cz
[2026-01-15 22:05:44] apptainer works
[2026-01-15 22:05:44] Set ATHENA_PROC_NUMBER=12
[2026-01-15 22:05:44] Set ATHENA_CORE_NUMBER=12
[2026-01-15 22:05:44] Starting ATLAS job with PandaID=6969419450
[2026-01-15 22:05:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:51:08]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:51:08]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6969419450/log.48215263._019680.job.log.tgz.1
[2026-01-15 22:51:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/33/log.48215263._019680.job.log.tgz.1
[2026-01-15 22:51:08]  workdir=None
[2026-01-15 22:51:08] ]
[2026-01-15 22:51:08] 2026-01-15 21:50:23,065 | INFO     | transferring file log.48215263._019680.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6969419450/log.48215263._019680.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-15 22:51:08] 2026-01-15 21:50:23,066 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6969419450/log.48215263._019680.job.log.tgz.1 /scratch/.boinc/slots/1/log.48215263._019680.j
[2026-01-15 22:51:08] 2026-01-15 21:50:23,094 | INFO     | adding to output.list: log.48215263._019680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/33/log.48215263._019680.job.log.tg
[2026-01-15 22:51:08] 2026-01-15 21:50:23,095 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 22:51:08] 2026-01-15 21:50:23,095 | INFO     | summary of transferred files:
[2026-01-15 22:51:08] 2026-01-15 21:50:23,095 | INFO     |  -- lfn=log.48215263._019680.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 22:51:08] 2026-01-15 21:50:23,095 | INFO     | stage-out finished correctly
[2026-01-15 22:51:08] 2026-01-15 21:50:23,228 | INFO     | time since job start (2666s) is within the limit (349056.0s)
[2026-01-15 22:51:08] 2026-01-15 21:50:23,633 | INFO     | monitor loop #191: job 0:6969419450 is in state 'finished'
[2026-01-15 22:51:08] 2026-01-15 21:50:23,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:51:08] 2026-01-15 21:50:23,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 22:51:08] 2026-01-15 21:50:25,234 | INFO     | time since job start (2668s) is within the limit (349056.0s)
[2026-01-15 22:51:08] 2026-01-15 21:50:26,136 | INFO     | monitor loop #192: job 0:6969419450 is in state 'finished'
[2026-01-15 22:51:08] 2026-01-15 21:50:26,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:51:08] 2026-01-15 21:50:26,373 | INFO     | job 6969419450 has state=finished
[2026-01-15 22:51:08] 2026-01-15 21:50:26,373 | INFO     | preparing for final server update for job 6969419450 in state='finished'
[2026-01-15 22:51:08] 2026-01-15 21:50:26,374 | INFO     | this job has now completed (state=finished)
[2026-01-15 22:51:08] 2026-01-15 21:50:26,374 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 22:51:08] 2026-01-15 21:50:26,374 | INFO     | log transfer has been attempted: DONE
[2026-01-15 22:51:08] 2026-01-15 21:50:26,374 | INFO     | job 6969419450 has finished - writing final server update
[2026-01-15 22:51:08] 2026-01-15 21:50:26,374 | INFO     | total number of processed events: 400 (read)
[2026-01-15 22:51:08] 2026-01-15 21:50:26,375 | INFO     | executing command: lscpu
[2026-01-15 22:51:08] 2026-01-15 21:50:26,453 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 22:51:08] 2026-01-15 21:50:27,240 | INFO     | time since job start (2670s) is within the limit (349056.0s)
[2026-01-15 22:51:08] 2026-01-15 21:50:28,639 | INFO     | monitor loop #193: job 0:6969419450 is in state 'finished'
[2026-01-15 22:51:08] 2026-01-15 21:50:28,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:51:08] 2026-01-15 21:50:29,245 | INFO     | time since job start (2672s) is within the limit (349056.0s)
[2026-01-15 22:51:08] 2026-01-15 21:50:30,666 | INFO     | PID=614478 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:51:08] 2026-01-15 21:50:30,666 | INFO     | .. there are 17 such processes running
[2026-01-15 22:51:08] 2026-01-15 21:50:31,142 | INFO     | monitor loop #194: job 0:6969419450 is in state 'finished'
[2026-01-15 22:51:08] 2026-01-15 21:50:31,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,667 | INFO     | time since job start (2674s) is within the limit (349056.0s)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,723 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:51:08] 2026-01-15 21:50:31,735 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2893.145520833335
[2026-01-15 22:51:08] 2026-01-15 21:50:31,752 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6969419450/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,753 | INFO     | extracted standard info from prmon json
[2026-01-15 22:51:08] 2026-01-15 21:50:31,753 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:51:08] 2026-01-15 21:50:31,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:51:08] 2026-01-15 21:50:31,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:51:08] 2026-01-15 21:50:31,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | sum of square deviations: 15695178.0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | sum of deviations: 82401667.0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | mean x: 1768512590.0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | mean y: 2742136.5675675673
[2026-01-15 22:51:08] 2026-01-15 21:50:31,755 | INFO     | intersect: -9282172346.497711
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | chi2: 0.002348563449723912
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | current memory leak: 5.25 B/s (using 37 data points, chi2=0.00)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | could have reported an average CPU frequency of 2813 MHz (5 samples)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | ..............................
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . Timing measurements:
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . get job = 0 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . initial setup = 1 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . payload setup = 7 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . stage-in = 0 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . payload execution = 2637 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,756 | INFO     | . stage-out = 0 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,757 | INFO     | . log creation = 0 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,757 | INFO     | ..............................
[2026-01-15 22:51:08] 2026-01-15 21:50:31,841 | INFO     | 
[2026-01-15 22:51:08] 2026-01-15 21:50:31,841 | INFO     | job summary report
[2026-01-15 22:51:08] 2026-01-15 21:50:31,841 | INFO     | --------------------------------------------------
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | PanDA job id: 6969419450
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | task id: 48215263
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | errors: (none)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | pilot state: finished 
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | transexitcode: 0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | exeerrorcode: 0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | exeerrordiag: 
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | exitcode: 0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | exitmsg: OK
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | cpuconsumptiontime: 25519 s
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | nevents: 400
[2026-01-15 22:51:08] 2026-01-15 21:50:31,842 | INFO     | neventsw: 0
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | pid: 645757
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | pgrp: 645757
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | corecount: 12
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | event service: False
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | sizes: {0: 2283772, 1: 2283971, 6: 2284233, 11: 2284261, 2648: 2309621, 2649: 2318621, 2650: 2318805, 2658: 2319031}
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | --------------------------------------------------
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | 
[2026-01-15 22:51:08] 2026-01-15 21:50:31,843 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2026-01-15 22:51:08] 2026-01-15 21:50:31,867 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,867 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,867 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,867 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,869 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,869 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:51:08] 2026-01-15 21:50:31,869 | INFO     | job 6969419450 has completed (purged errors)
[2026-01-15 22:51:08] 2026-01-15 21:50:31,869 | INFO     | overall cleanup function is called
[2026-01-15 22:51:08] 2026-01-15 21:50:32,878 | INFO     | --- collectZombieJob: --- 10, [645757]
[2026-01-15 22:51:08] 2026-01-15 21:50:32,878 | INFO     | zombie collector waiting for pid 645757
[2026-01-15 22:51:08] 2026-01-15 21:50:32,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:51:08] 2026-01-15 21:50:32,878 | INFO     | collected zombie processes
[2026-01-15 22:51:08] 2026-01-15 21:50:32,878 | INFO     | will attempt to kill all subprocesses of pid=645757
[2026-01-15 22:51:08] 2026-01-15 21:50:33,275 | INFO     | process IDs to be killed: [645757] (in reverse order)
[2026-01-15 22:51:08] 2026-01-15 21:50:33,411 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:51:08] 2026-01-15 21:50:33,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:51:08] 2026-01-15 21:50:33,426 | INFO     | did not find any defunct processes belonging to 645757
[2026-01-15 22:51:08] 2026-01-15 21:50:33,439 | INFO     | did not find any defunct processes belonging to 645757
[2026-01-15 22:51:08] 2026-01-15 21:50:33,439 | INFO     | ready for new job
[2026-01-15 22:51:08] 2026-01-15 21:50:33,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:51:08] 2026-01-15 21:50:33,441 | INFO     | ***************************************
[2026-01-15 22:51:08] 2026-01-15 21:50:33,441 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:51:08] 2026-01-15 21:50:33,441 | INFO     | ***************************************
[2026-01-15 22:51:08] 2026-01-15 21:50:33,441 | INFO     | 
[2026-01-15 22:51:08] 2026-01-15 21:50:33,447 | INFO     | architecture information:
[2026-01-15 22:51:08] 2026-01-15 21:50:33,447 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:51:08] 2026-01-15 21:50:33,470 | INFO     | cat /etc/os-release:
[2026-01-15 22:51:08] NAME="CentOS Linux"
[2026-01-15 22:51:08] VERSION="7 (Core)"
[2026-01-15 22:51:08] ID="centos"
[2026-01-15 22:51:08] ID_LIKE="rhel fedora"
[2026-01-15 22:51:08] VERSION_ID="7"
[2026-01-15 22:51:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:51:08] ANSI_COLOR="0;31"
[2026-01-15 22:51:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:51:08] HOME_URL="https://www.centos.org/"
[2026-01-15 22:51:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:51:08] 
[2026-01-15 22:51:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:51:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:51:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:51:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:51:08] 
[2026-01-15 22:51:08] 2026-01-15 21:50:33,470 | INFO     | ***************************************
[2026-01-15 22:51:08] 2026-01-15 21:50:33,973 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2026-01-15 22:51:08] 2026-01-15 21:50:34,000 | INFO     | sufficient remaining disk space (1572551524352 B)
[2026-01-15 22:51:08] 2026-01-15 21:50:34,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:51:08] 2026-01-15 21:50:34,001 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:51:08] 2026-01-15 21:50:34,002 | INFO     | update_server=False
[2026-01-15 22:51:08] 2026-01-15 21:50:34,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:51:08] 2026-01-15 21:50:34,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:51:08] 2026-01-15 21:50:34,300 | INFO     | all data control threads have been joined
[2026-01-15 22:51:08] 2026-01-15 21:50:34,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:51:08] 2026-01-15 21:50:34,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:51:08] 2026-01-15 21:50:34,650 | INFO     | aborting loop
[2026-01-15 22:51:08] 2026-01-15 21:50:34,699 | INFO     | all payload control threads have been joined
[2026-01-15 22:51:08] 2026-01-15 21:50:35,007 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,295 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,305 | INFO     | [data] control thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,320 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,538 | INFO     | [job] validate thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,636 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,655 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,703 | INFO     | all job control threads have been joined
[2026-01-15 22:51:08] 2026-01-15 21:50:35,704 | INFO     | [payload] control thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:35,735 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:36,008 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:36,257 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:36,478 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:36,708 | INFO     | [job] control thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:36,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:51:08] 2026-01-15 21:50:37,856 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:38,537 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:44,240 | INFO     | job.realtimelogging is not enabled
[2026-01-15 22:51:08] 2026-01-15 21:50:45,245 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:51:08] 2026-01-15 21:50:55,000 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-01-15 22:51:08] 2026-01-15 21:51:01,015 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:51:08] 2026-01-15 21:51:02,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627688576832)>', '<ExcThread(monitor, started 139627172198144)>']
[2026-01-15 22:51:08] 2026-01-15 21:51:05,166 | INFO     | PID=614478 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 22:51:08] 2026-01-15 21:51:05,166 | INFO     | .. there are 17 such processes running
[2026-01-15 22:51:08] 2026-01-15 21:51:05,167 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:51:08] 2026-01-15 21:51:05,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:51:08] 2026-01-15 21:51:05,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:51:08] 2026-01-15 21:51:05,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:51:08] 2026-01-15 21:51:05,168 | INFO     | [monitor] control thread has ended
[2026-01-15 22:51:08] 2026-01-15 21:51:07,648 | INFO     | all workflow threads have been joined
[2026-01-15 22:51:08] 2026-01-15 21:51:07,649 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:51:08] 2026-01-15 21:51:07,649 | INFO     | traces error code: 0
[2026-01-15 22:51:08] 2026-01-15 21:51:07,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:51:08] 2026-01-15 21:51:07,780 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:51:08] 2026-01-15 21:51:07,784 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:51:08] 2026-01-15 21:51:07,788 [wrapper] pilotpid: 614478
[2026-01-15 22:51:08] 2026-01-15 21:51:07,791 [wrapper] Pilot exit status: 0
[2026-01-15 22:51:08] 2026-01-15 21:51:07,806 [wrapper] pandaids: 6969419450
[2026-01-15 22:51:08] 2026-01-15 21:51:07,912 [wrapper] cleanup supervisor_pilot  719928 614479
[2026-01-15 22:51:08] 2026-01-15 21:51:07,916 [wrapper] Test setup, not cleaning
[2026-01-15 22:51:08] 2026-01-15 21:51:07,920 [wrapper] apfmon messages muted
[2026-01-15 22:51:08] 2026-01-15 21:51:07,924 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:51:08] 2026-01-15 21:51:07,928 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:51:08]  *** Error codes and diagnostics ***
[2026-01-15 22:51:08]     "exeErrorCode": 0,
[2026-01-15 22:51:08]     "exeErrorDiag": "",
[2026-01-15 22:51:08]     "pilotErrorCode": 0,
[2026-01-15 22:51:08]     "pilotErrorDiag": "",
[2026-01-15 22:51:08]  *** Listing of results directory ***
[2026-01-15 22:51:08] total 733716
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc    579449 Jan 14 10:29 pilot3.tar.gz
[2026-01-15 22:51:08] -rwx------ 1 boinc boinc     36322 Jan 14 10:31 runpilot2-wrapper.sh
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc      5112 Jan 14 10:31 queuedata.json
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc       100 Jan 15 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:51:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 22:05 run_atlas
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc       105 Jan 15 22:05 job.xml
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc 592499107 Jan 15 22:05 EVNT.32794306._000789.pool.root.1
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc      6676 Jan 15 22:05 init_data.xml
[2026-01-15 22:51:08] drwxrwx--x 2 boinc boinc      4096 Jan 15 22:05 shared
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc    592403 Jan 15 22:05 input.tar.gz
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:05 start_atlas.sh
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc         0 Jan 15 22:05 boinc_lockfile
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc      2503 Jan 15 22:05 pandaJob.out
[2026-01-15 22:51:08] -rw------- 1 boinc boinc   1004075 Jan 15 22:05 agis_schedconf.cvmfs.json
[2026-01-15 22:51:08] -rw------- 1 boinc boinc   1516246 Jan 15 22:05 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:51:08] drwx------ 5 boinc boinc      4096 Jan 15 22:05 pilot3
[2026-01-15 22:51:08] -rw------- 1 boinc boinc 153392369 Jan 15 22:49 HITS.48215263._019680.pool.root.1
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc       527 Jan 15 22:49 boinc_task_state.xml
[2026-01-15 22:51:08] -rw------- 1 boinc boinc      1023 Jan 15 22:50 memory_monitor_summary.json
[2026-01-15 22:51:08] -rw------- 1 boinc boinc    340623 Jan 15 22:50 log.48215263._019680.job.log.tgz.1
[2026-01-15 22:51:08] -rw------- 1 boinc boinc      7769 Jan 15 22:50 heartbeat.json
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc        27 Jan 15 22:51 wrapper_checkpoint.txt
[2026-01-15 22:51:08] -rw------- 1 boinc boinc        95 Jan 15 22:51 pilot_heartbeat.json
[2026-01-15 22:51:08] -rw------- 1 boinc boinc      4898 Jan 15 22:51 pilotlog.txt
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:51 boinc_mmap_file
[2026-01-15 22:51:08] -rw------- 1 boinc boinc    408831 Jan 15 22:51 log.48215263._019680.job.log.1
[2026-01-15 22:51:08] -rw------- 1 boinc boinc       357 Jan 15 22:51 output.list
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc       620 Jan 15 22:51 runtime_log
[2026-01-15 22:51:08] -rw------- 1 boinc boinc    768000 Jan 15 22:51 result.tar.gz
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc      8880 Jan 15 22:51 runtime_log.err
[2026-01-15 22:51:08] -rw------- 1 boinc boinc       663 Jan 15 22:51 GkJMDmiOC08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1bkKDmJbqCan.diag
[2026-01-15 22:51:08] -rw-r--r-- 1 boinc boinc     22386 Jan 15 22:51 stderr.txt
[2026-01-15 22:51:08] HITS file was successfully produced:
[2026-01-15 22:51:08] -rw------- 1 boinc boinc 153392369 Jan 15 22:49 shared/HITS.pool.root.1
[2026-01-15 22:51:08]  *** Contents of shared directory: ***
[2026-01-15 22:51:08] total 729772
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc 592499107 Jan 15 22:05 ATLAS.root_0
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc    592403 Jan 15 22:05 input.tar.gz
[2026-01-15 22:51:08] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:05 start_atlas.sh
[2026-01-15 22:51:08] -rw------- 1 boinc boinc 153392369 Jan 15 22:49 HITS.pool.root.1
[2026-01-15 22:51:08] -rw------- 1 boinc boinc    768000 Jan 15 22:51 result.tar.gz
22:51:09 (600790): run_atlas exited; CPU time 25556.599782
22:51:09 (600790): called boinc_finish(0)

</stderr_txt>
]]>

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