Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:08:09 (3215085): wrapper (7.7.26015): starting
11:08:09 (3215085): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 11:08:09] Arguments: --nthreads 8
[2026-01-15 11:08:09] Threads: 8
[2026-01-15 11:08:09] Checking for CVMFS
[2026-01-15 11:08:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:08:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:08:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:08:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:08:10] 2.13.3.0 14328 102248 170632 155177 0 878 37948836 40960000 35696 16776704 0 1042920261 99.705 815958840 50271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 11:08:10] CVMFS is ok
[2026-01-15 11:08:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:08:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:08:10] Further information can be found at the LHC@home message board.
[2026-01-15 11:08:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:08:10] Checking for apptainer binary...
[2026-01-15 11:08:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:08:10] Running /usr/bin/apptainer --version
[2026-01-15 11:08:10] apptainer version 1.4.5-2.el9
[2026-01-15 11:08:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:08:10] c8-16-2.aglt2.org
[2026-01-15 11:08:10] apptainer works
[2026-01-15 11:08:10] Set ATHENA_PROC_NUMBER=8
[2026-01-15 11:08:10] Set ATHENA_CORE_NUMBER=8
[2026-01-15 11:08:10] Starting ATLAS job with PandaID=6970457185
[2026-01-15 11:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:03:39]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:03:39] 2026-01-15 17:02:53,900 | INFO     |  -- lfn=log.48188632._000119.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 12:03:39] 2026-01-15 17:02:53,900 | INFO     | stage-out finished correctly
[2026-01-15 12:03:39] 2026-01-15 17:02:54,841 | INFO     | time since job start (3270s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:02:56,225 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:03:39] 2026-01-15 17:02:56,277 | INFO     | job 6970457185 has state=finished
[2026-01-15 12:03:39] 2026-01-15 17:02:56,277 | INFO     | preparing for final server update for job 6970457185 in state='finished'
[2026-01-15 12:03:39] 2026-01-15 17:02:56,278 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:03:39] 2026-01-15 17:02:56,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:03:39] 2026-01-15 17:02:56,278 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:03:39] 2026-01-15 17:02:56,278 | INFO     | job 6970457185 has finished - writing final server update
[2026-01-15 12:03:39] 2026-01-15 17:02:56,278 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:03:39] 2026-01-15 17:02:56,288 | INFO     | executing command: lscpu
[2026-01-15 12:03:39] 2026-01-15 17:02:56,409 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:03:39] 2026-01-15 17:02:56,847 | INFO     | time since job start (3272s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:02:58,853 | INFO     | time since job start (3274s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:03:00,187 | WARNING  | process 3227538 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 12:03:39] 2026-01-15 17:03:00,187 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6970457185/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:03:39] 2026-01-15 17:03:00,188 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6970457185/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:03:39] 2026-01-15 17:03:00,188 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-15 12:03:39] 2026-01-15 17:03:00,188 | WARNING  | maxPSS not found in memory monitor output
[2026-01-15 12:03:39] 2026-01-15 17:03:00,188 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3730709 B
[2026-01-15 12:03:39] 2026-01-15 17:03:00,188 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15823 B
[2026-01-15 12:03:39] 2026-01-15 17:03:00,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-15 12:03:39] 2026-01-15 17:03:00,860 | INFO     | time since job start (3276s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:03:02,867 | INFO     | time since job start (3278s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:03:04,873 | INFO     | time since job start (3280s) is within the limit (349056.0s)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,253 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:03:39] 2026-01-15 17:03:05,258 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3775.0276484375004
[2026-01-15 12:03:39] 2026-01-15 17:03:05,275 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6970457185/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,275 | INFO     | extracted standard info from prmon json
[2026-01-15 12:03:39] 2026-01-15 17:03:05,276 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:03:39] 2026-01-15 17:03:05,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:03:39] 2026-01-15 17:03:05,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:03:39] 2026-01-15 17:03:05,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | sum of square deviations: 30168007.5
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | sum of deviations: 572456086.0
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | mean x: 1768495015.5
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | mean y: 2516831.4782608696
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | intersect: -33555739698.51098
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | chi2: 0.0032129165780916706
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | current memory leak: 18.98 B/s (using 46 data points, chi2=0.00)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,279 | INFO     | could have reported an average CPU frequency of 3781 MHz (5 samples)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | ..............................
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . Timing measurements:
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . get job = 0 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . initial setup = 2 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . payload setup = 8 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . stage-in = 0 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . payload execution = 3238 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . stage-out = 0 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | . log creation = 0 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,280 | INFO     | ..............................
[2026-01-15 12:03:39] 2026-01-15 17:03:05,332 | INFO     | sufficient remaining disk space (168901476352 B)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,333 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,333 | INFO     | size of work directory /tmp/boinchome/slots/8/PanDA_Pilot-6970457185: 4021392 B (within 4404019200 B limit)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,333 | INFO     | pfn file=/tmp/boinchome/slots/8/PanDA_Pilot-6970457185/HITS.48188632._000119.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,333 | INFO     | total size of present files: 0 B (workdir size: 4021392 B)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,333 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/8/PanDA_Pilot-6970457185/HITS.48188632._000119.pool.root.1 since it does not exist
[2026-01-15 12:03:39] 2026-01-15 17:03:05,688 | INFO     | 
[2026-01-15 12:03:39] 2026-01-15 17:03:05,688 | INFO     | job summary report
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | --------------------------------------------------
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | PanDA job id: 6970457185
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | task id: 48188632
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | errors: (none)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | pilot state: finished 
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | transexitcode: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:05,699 | INFO     | exeerrorcode: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | exeerrordiag: 
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | exitcode: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | exitmsg: OK
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | cpuconsumptiontime: 20103 s
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | nevents: 400
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | neventsw: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | pid: 3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | pgrp: 3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | corecount: 8
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | event service: False
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | sizes: {0: 2284109, 6: 2284371, 10: 2284399, 3251: 2309993, 3252: 2318991, 3254: 2319047, 3263: 2319401}
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | --------------------------------------------------
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | 
[2026-01-15 12:03:39] 2026-01-15 17:03:05,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-01-15 12:03:39] 2026-01-15 17:03:05,723 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,726 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,727 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,732 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:03:39] 2026-01-15 17:03:05,732 | INFO     | job 6970457185 has completed (purged errors)
[2026-01-15 12:03:39] 2026-01-15 17:03:05,732 | INFO     | overall cleanup function is called
[2026-01-15 12:03:39] 2026-01-15 17:03:05,805 | INFO     | number of running child processes to parent process 3227538: 1
[2026-01-15 12:03:39] 2026-01-15 17:03:05,805 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:03:39] 2026-01-15 17:03:05,805 | INFO     | aborting job monitoring since job object (job id=6970457185) has expired
[2026-01-15 12:03:39] 2026-01-15 17:03:06,742 | INFO     | --- collectZombieJob: --- 10, [3227538]
[2026-01-15 12:03:39] 2026-01-15 17:03:06,742 | INFO     | zombie collector waiting for pid 3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:06,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:03:39] 2026-01-15 17:03:06,742 | INFO     | collected zombie processes
[2026-01-15 12:03:39] 2026-01-15 17:03:06,742 | INFO     | will attempt to kill all subprocesses of pid=3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:07,196 | INFO     | process IDs to be killed: [3227538] (in reverse order)
[2026-01-15 12:03:39] 2026-01-15 17:03:07,395 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:03:39] 2026-01-15 17:03:07,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:03:39] 2026-01-15 17:03:07,419 | INFO     | did not find any defunct processes belonging to 3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:07,441 | INFO     | did not find any defunct processes belonging to 3227538
[2026-01-15 12:03:39] 2026-01-15 17:03:07,441 | INFO     | ready for new job
[2026-01-15 12:03:39] 2026-01-15 17:03:07,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:03:39] 2026-01-15 17:03:07,443 | INFO     | ***************************************
[2026-01-15 12:03:39] 2026-01-15 17:03:07,443 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:03:39] 2026-01-15 17:03:07,443 | INFO     | ***************************************
[2026-01-15 12:03:39] 2026-01-15 17:03:07,443 | INFO     | 
[2026-01-15 12:03:39] 2026-01-15 17:03:07,447 | INFO     | architecture information:
[2026-01-15 12:03:39] 2026-01-15 17:03:07,447 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:03:39] 2026-01-15 17:03:07,462 | INFO     | cat /etc/os-release:
[2026-01-15 12:03:39] NAME="CentOS Linux"
[2026-01-15 12:03:39] VERSION="7 (Core)"
[2026-01-15 12:03:39] ID="centos"
[2026-01-15 12:03:39] ID_LIKE="rhel fedora"
[2026-01-15 12:03:39] VERSION_ID="7"
[2026-01-15 12:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:03:39] ANSI_COLOR="0;31"
[2026-01-15 12:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:03:39] HOME_URL="https://www.centos.org/"
[2026-01-15 12:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:03:39] 
[2026-01-15 12:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:03:39] 
[2026-01-15 12:03:39] 2026-01-15 17:03:07,462 | INFO     | ***************************************
[2026-01-15 12:03:39] 2026-01-15 17:03:07,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-15 12:03:39] 2026-01-15 17:03:07,979 | INFO     | sufficient remaining disk space (168905670656 B)
[2026-01-15 12:03:39] 2026-01-15 17:03:07,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:03:39] 2026-01-15 17:03:07,982 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:03:39] 2026-01-15 17:03:07,982 | INFO     | update_server=False
[2026-01-15 12:03:39] 2026-01-15 17:03:07,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:03:39] 2026-01-15 17:03:07,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:03:39] 2026-01-15 17:03:08,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 12:03:39] 2026-01-15 17:03:08,308 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 12:03:39] 2026-01-15 17:03:08,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:03:39] 2026-01-15 17:03:08,309 | INFO     | will abort loop
[2026-01-15 12:03:39] 2026-01-15 17:03:08,597 | INFO     | all payload control threads have been joined
[2026-01-15 12:03:39] 2026-01-15 17:03:08,603 | INFO     | all data control threads have been joined
[2026-01-15 12:03:39] 2026-01-15 17:03:08,991 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,003 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,207 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,314 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,425 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,458 | INFO     | all job control threads have been joined
[2026-01-15 12:03:39] 2026-01-15 17:03:09,485 | INFO     | [job] validate thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,606 | INFO     | [payload] control thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,609 | INFO     | [data] control thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:09,990 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:10,058 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:10,266 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:10,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:03:39] 2026-01-15 17:03:10,427 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:10,464 | INFO     | [job] control thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:11,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:03:39] 2026-01-15 17:03:11,363 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:15,312 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:18,185 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:03:39] 2026-01-15 17:03:19,190 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:03:39] 2026-01-15 17:03:29,362 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:03:39] 2026-01-15 17:03:29,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331078653760)>', '<ExcThread(monitor, started 140330590525184)>']
[2026-01-15 12:03:39] 2026-01-15 17:03:34,974 | INFO     | all workflow threads have been joined
[2026-01-15 12:03:39] 2026-01-15 17:03:34,974 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:03:39] 2026-01-15 17:03:34,975 | INFO     | traces error code: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:34,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:03:39] 2026-01-15 17:03:38,567 | INFO     | PID=3220127 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:03:39] 2026-01-15 17:03:38,569 | INFO     | .. there are 28 such processes running
[2026-01-15 12:03:39] 2026-01-15 17:03:38,569 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:03:39] 2026-01-15 17:03:38,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:03:39] 2026-01-15 17:03:38,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:03:39] 2026-01-15 17:03:38,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:03:39] 2026-01-15 17:03:38,570 | INFO     | [monitor] control thread has ended
[2026-01-15 12:03:39] 2026-01-15 17:03:38,801 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:03:39] 2026-01-15 17:03:38,824 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:03:39] 2026-01-15 17:03:38,830 [wrapper] pilotpid: 3220127
[2026-01-15 12:03:39] 2026-01-15 17:03:38,834 [wrapper] Pilot exit status: 0
[2026-01-15 12:03:39] 2026-01-15 17:03:38,905 [wrapper] pandaids: 6970457185
[2026-01-15 12:03:39] 2026-01-15 17:03:39,067 [wrapper] cleanup supervisor_pilot 3500160 3220128
[2026-01-15 12:03:39] 2026-01-15 17:03:39,071 [wrapper] Test setup, not cleaning
[2026-01-15 12:03:39] 2026-01-15 17:03:39,079 [wrapper] apfmon messages muted
[2026-01-15 12:03:39] 2026-01-15 17:03:39,084 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:03:39] 2026-01-15 17:03:39,091 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:03:39]  *** Error codes and diagnostics ***
[2026-01-15 12:03:39]     "exeErrorCode": 0,
[2026-01-15 12:03:39]     "exeErrorDiag": "",
[2026-01-15 12:03:39]     "pilotErrorCode": 0,
[2026-01-15 12:03:39]     "pilotErrorDiag": "",
[2026-01-15 12:03:39]  *** Listing of results directory ***
[2026-01-15 12:03:39] total 475880
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:44 queuedata.json
[2026-01-15 12:03:39] -rwx------. 1 boincer umatlas     36322 Jan 15 05:44 runpilot2-wrapper.sh
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:03:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:08 run_atlas
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:08 job.xml
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas 290169433 Jan 15 11:08 EVNT.48188630._000006.pool.root.1
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:08 start_atlas.sh
[2026-01-15 12:03:39] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:08 shared
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas    592412 Jan 15 11:08 input.tar.gz
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:08 boinc_lockfile
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas      2617 Jan 15 11:08 pandaJob.out
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas        57 Jan 15 11:08 setup.sh.local
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas   1004083 Jan 15 11:08 agis_schedconf.cvmfs.json
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:08 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:03:39] drwx------. 5 boincer umatlas      4096 Jan 15 11:08 pilot3
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas 191527218 Jan 15 12:02 HITS.48188632._000119.pool.root.1
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:02 boinc_task_state.xml
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas      1048 Jan 15 12:02 memory_monitor_summary.json
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas    341925 Jan 15 12:02 log.48188632._000119.job.log.tgz.1
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 12:02 init_data.xml
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas      7790 Jan 15 12:03 heartbeat.json
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:03 boinc_mmap_file
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:03 wrapper_checkpoint.txt
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas       823 Jan 15 12:03 pilotlog.txt
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas        95 Jan 15 12:03 pilot_heartbeat.json
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas    491678 Jan 15 12:03 log.48188632._000119.job.log.1
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas       357 Jan 15 12:03 output.list
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:03 runtime_log
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas    849920 Jan 15 12:03 result.tar.gz
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas       654 Jan 15 12:03 T9bMDmN1Z08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg5uKDm6ThnIm.diag
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas      9336 Jan 15 12:03 runtime_log.err
[2026-01-15 12:03:39] -rw-r--r--. 1 boincer umatlas     22437 Jan 15 12:03 stderr.txt
[2026-01-15 12:03:39] HITS file was successfully produced:
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas 191527218 Jan 15 12:02 shared/HITS.pool.root.1
[2026-01-15 12:03:39]  *** Contents of shared directory: ***
[2026-01-15 12:03:39] total 471848
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas 290169433 Jan 15 11:08 ATLAS.root_0
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:08 start_atlas.sh
[2026-01-15 12:03:39] -rw-r--r--. 2 boincer umatlas    592412 Jan 15 11:08 input.tar.gz
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas 191527218 Jan 15 12:02 HITS.pool.root.1
[2026-01-15 12:03:39] -rw-------. 1 boincer umatlas    849920 Jan 15 12:03 result.tar.gz
12:03:40 (3215085): run_atlas exited; CPU time 20189.342716
12:03:40 (3215085): called boinc_finish(0)

</stderr_txt>
]]>

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