Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:59:46 (2782805): wrapper (7.7.26015): starting
11:59:46 (2782805): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 11:59:46] Arguments: --nthreads 9
[2026-01-15 11:59:46] Threads: 9
[2026-01-15 11:59:46] Checking for CVMFS
[2026-01-15 11:59:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:59:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:59:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:59:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:59:47] 2.13.3.0 2295398 25792 102380 155179 2 57 34448083 37030913 1832 16776704 0 16326197 99.953 1338319 44505 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 11:59:47] CVMFS is ok
[2026-01-15 11:59:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:59:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:59:47] Further information can be found at the LHC@home message board.
[2026-01-15 11:59:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:59:47] Checking for apptainer binary...
[2026-01-15 11:59:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:59:47] Running /usr/bin/apptainer --version
[2026-01-15 11:59:47] apptainer version 1.4.5-2.el9
[2026-01-15 11:59:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:59:47] c-205-36.aglt2.org
[2026-01-15 11:59:47] apptainer works
[2026-01-15 11:59:47] Set ATHENA_PROC_NUMBER=9
[2026-01-15 11:59:47] Set ATHENA_CORE_NUMBER=9
[2026-01-15 11:59:47] Starting ATLAS job with PandaID=6971277361
[2026-01-15 11:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:46:03]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:46:03]  is_tar=False
[2026-01-15 12:46:03]  lfn=log.48215263._052090.job.log.tgz.1
[2026-01-15 12:46:03]  mtime=0
[2026-01-15 12:46:03]  protocol_id=None
[2026-01-15 12:46:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 12:46:03]  replicas=None
[2026-01-15 12:46:03]  scope=mc23_13p6TeV
[2026-01-15 12:46:03]  status=None
[2026-01-15 12:46:03]  status_code=0
[2026-01-15 12:46:03]  storage_token=
[2026-01-15 12:46:03]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6971277361/log.48215263._052090.job.log.tgz.1
[2026-01-15 12:46:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/87/log.48215263._052090.job.log.tgz.1
[2026-01-15 12:46:03]  workdir=None
[2026-01-15 12:46:03] ]
[2026-01-15 12:46:03] 2026-01-15 17:44:53,661 | INFO     | transferring file log.48215263._052090.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6971277361/log.48215263._052090.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 12:46:03] 2026-01-15 17:44:53,661 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6971277361/log.48215263._052090.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._052090.job
[2026-01-15 12:46:03] 2026-01-15 17:44:53,672 | INFO     | adding to output.list: log.48215263._052090.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/87/log.48215263._052090.job.log.tg
[2026-01-15 12:46:03] 2026-01-15 17:44:53,673 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 12:46:03] 2026-01-15 17:44:53,673 | INFO     | summary of transferred files:
[2026-01-15 12:46:03] 2026-01-15 17:44:53,673 | INFO     |  -- lfn=log.48215263._052090.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 12:46:03] 2026-01-15 17:44:53,673 | INFO     | stage-out finished correctly
[2026-01-15 12:46:03] 2026-01-15 17:44:53,727 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:46:03] 2026-01-15 17:44:54,053 | INFO     | monitor loop #206: job 0:6971277361 is in state 'finished'
[2026-01-15 12:46:03] 2026-01-15 17:44:54,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:46:03] 2026-01-15 17:44:55,467 | INFO     | time since job start (2701s) is within the limit (349056.0s)
[2026-01-15 12:46:03] 2026-01-15 17:44:56,365 | INFO     | job 6971277361 has state=finished
[2026-01-15 12:46:03] 2026-01-15 17:44:56,365 | INFO     | preparing for final server update for job 6971277361 in state='finished'
[2026-01-15 12:46:03] 2026-01-15 17:44:56,366 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:46:03] 2026-01-15 17:44:56,366 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:46:03] 2026-01-15 17:44:56,366 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:46:03] 2026-01-15 17:44:56,366 | INFO     | job 6971277361 has finished - writing final server update
[2026-01-15 12:46:03] 2026-01-15 17:44:56,366 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:46:03] 2026-01-15 17:44:56,367 | INFO     | executing command: lscpu
[2026-01-15 12:46:03] 2026-01-15 17:44:56,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:46:03] 2026-01-15 17:44:56,556 | INFO     | monitor loop #207: job 0:6971277361 is in state 'finished'
[2026-01-15 12:46:03] 2026-01-15 17:44:56,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:46:03] 2026-01-15 17:44:57,472 | INFO     | time since job start (2703s) is within the limit (349056.0s)
[2026-01-15 12:46:03] 2026-01-15 17:44:58,551 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 12:46:03] 2026-01-15 17:44:58,557 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2731.8647187500005
[2026-01-15 12:46:03] 2026-01-15 17:44:58,564 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6971277361/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:46:03] 2026-01-15 17:44:58,565 | INFO     | extracted standard info from prmon json
[2026-01-15 12:46:03] 2026-01-15 17:44:58,565 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:46:03] 2026-01-15 17:44:58,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:46:03] 2026-01-15 17:44:58,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:46:03] 2026-01-15 17:44:58,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:46:03] 2026-01-15 17:44:58,567 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:46:03] 2026-01-15 17:44:58,567 | INFO     | sum of square deviations: 15695178.0
[2026-01-15 12:46:03] 2026-01-15 17:44:58,567 | INFO     | sum of deviations: -3687758598.9999995
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | mean x: 1768497817.0
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | mean y: 2767172.243243243
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | intersect: 415531220048.3098
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | chi2: 0.0593954121772352
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | current memory leak: -234.96 B/s (using 37 data points, chi2=0.06)
[2026-01-15 12:46:03] 2026-01-15 17:44:58,568 | INFO     | could have reported an average CPU frequency of 2690 MHz (5 samples)
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | ..............................
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . Timing measurements:
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . get job = 0 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . initial setup = 2 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . payload setup = 3 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . stage-in = 0 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,569 | INFO     | . payload execution = 2678 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,570 | INFO     | . stage-out = 0 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,570 | INFO     | . log creation = 0 s
[2026-01-15 12:46:03] 2026-01-15 17:44:58,570 | INFO     | ..............................
[2026-01-15 12:46:03] 2026-01-15 17:44:59,045 | INFO     | 
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | job summary report
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | --------------------------------------------------
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | PanDA job id: 6971277361
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | task id: 48215263
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | errors: (none)
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | pilot state: finished 
[2026-01-15 12:46:03] 2026-01-15 17:44:59,046 | INFO     | transexitcode: 0
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | exeerrorcode: 0
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | exeerrordiag: 
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | exitcode: 0
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | exitmsg: OK
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | cpuconsumptiontime: 21549 s
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | nevents: 400
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | neventsw: 0
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | pid: 2794389
[2026-01-15 12:46:03] 2026-01-15 17:44:59,047 | INFO     | pgrp: 2794389
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | corecount: 9
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | event service: False
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | sizes: {0: 2283672, 1: 2283927, 3: 2284189, 11: 2284217, 2684: 2309590, 2686: 2318772, 2690: 2318942}
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | --------------------------------------------------
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | 
[2026-01-15 12:46:03] 2026-01-15 17:44:59,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 12:46:03] 2026-01-15 17:44:59,060 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,060 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,060 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,060 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,062 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:46:03] 2026-01-15 17:44:59,063 | INFO     | job 6971277361 has completed (purged errors)
[2026-01-15 12:46:03] 2026-01-15 17:44:59,063 | INFO     | overall cleanup function is called
[2026-01-15 12:46:03] 2026-01-15 17:45:00,070 | INFO     | --- collectZombieJob: --- 10, [2794389]
[2026-01-15 12:46:03] 2026-01-15 17:45:00,070 | INFO     | zombie collector waiting for pid 2794389
[2026-01-15 12:46:03] 2026-01-15 17:45:00,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:46:03] 2026-01-15 17:45:00,070 | INFO     | collected zombie processes
[2026-01-15 12:46:03] 2026-01-15 17:45:00,070 | INFO     | will attempt to kill all subprocesses of pid=2794389
[2026-01-15 12:46:03] 2026-01-15 17:45:00,193 | INFO     | process IDs to be killed: [2794389] (in reverse order)
[2026-01-15 12:46:03] 2026-01-15 17:45:00,223 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:46:03] 2026-01-15 17:45:00,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:46:03] 2026-01-15 17:45:00,226 | INFO     | did not find any defunct processes belonging to 2794389
[2026-01-15 12:46:03] 2026-01-15 17:45:00,229 | INFO     | did not find any defunct processes belonging to 2794389
[2026-01-15 12:46:03] 2026-01-15 17:45:00,229 | INFO     | ready for new job
[2026-01-15 12:46:03] 2026-01-15 17:45:00,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:46:03] 2026-01-15 17:45:00,230 | INFO     | ***************************************
[2026-01-15 12:46:03] 2026-01-15 17:45:00,230 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:46:03] 2026-01-15 17:45:00,230 | INFO     | ***************************************
[2026-01-15 12:46:03] 2026-01-15 17:45:00,230 | INFO     | 
[2026-01-15 12:46:03] 2026-01-15 17:45:00,231 | INFO     | architecture information:
[2026-01-15 12:46:03] 2026-01-15 17:45:00,231 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:46:03] 2026-01-15 17:45:00,238 | INFO     | cat /etc/os-release:
[2026-01-15 12:46:03] NAME="CentOS Linux"
[2026-01-15 12:46:03] VERSION="7 (Core)"
[2026-01-15 12:46:03] ID="centos"
[2026-01-15 12:46:03] ID_LIKE="rhel fedora"
[2026-01-15 12:46:03] VERSION_ID="7"
[2026-01-15 12:46:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:46:03] ANSI_COLOR="0;31"
[2026-01-15 12:46:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:46:03] HOME_URL="https://www.centos.org/"
[2026-01-15 12:46:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:46:03] 
[2026-01-15 12:46:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:46:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:46:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:46:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:46:03] 
[2026-01-15 12:46:03] 2026-01-15 17:45:00,238 | INFO     | ***************************************
[2026-01-15 12:46:03] 2026-01-15 17:45:00,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 12:46:03] 2026-01-15 17:45:00,750 | INFO     | sufficient remaining disk space (41476423680 B)
[2026-01-15 12:46:03] 2026-01-15 17:45:00,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:46:03] 2026-01-15 17:45:00,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:46:03] 2026-01-15 17:45:00,751 | INFO     | update_server=False
[2026-01-15 12:46:03] 2026-01-15 17:45:00,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:46:03] 2026-01-15 17:45:00,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:46:03] 2026-01-15 17:45:00,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:46:03] 2026-01-15 17:45:00,751 | INFO     | aborting loop
[2026-01-15 12:46:03] 2026-01-15 17:45:00,880 | INFO     | all payload control threads have been joined
[2026-01-15 12:46:03] 2026-01-15 17:45:01,094 | INFO     | all data control threads have been joined
[2026-01-15 12:46:03] 2026-01-15 17:45:01,189 | INFO     | all job control threads have been joined
[2026-01-15 12:46:03] 2026-01-15 17:45:01,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:46:03] 2026-01-15 17:45:01,752 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:01,756 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:01,885 | INFO     | [payload] control thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:01,906 | INFO     | [job] validate thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,100 | INFO     | [data] control thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,125 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,195 | INFO     | [job] control thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,414 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,506 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:02,885 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:03,091 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:03,226 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:03,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:46:03] 2026-01-15 17:45:03,743 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:04,655 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:04,756 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:11,036 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:46:03] 2026-01-15 17:45:12,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:46:03] 2026-01-15 17:45:30,674 | INFO     | PID=2786522 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:46:03] 2026-01-15 17:45:30,674 | INFO     | .. there are 2 such processes running
[2026-01-15 12:46:03] 2026-01-15 17:45:30,675 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:46:03] 2026-01-15 17:45:30,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:46:03] 2026-01-15 17:45:30,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:46:03] 2026-01-15 17:45:57,649 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:46:03] 2026-01-15 17:45:58,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721639610176)>', '<ExcThread(monitor, started 139721275578112)>']
[2026-01-15 12:46:03] 2026-01-15 17:45:58,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:46:03] 2026-01-15 17:45:58,816 | INFO     | [monitor] control thread has ended
[2026-01-15 12:46:03] 2026-01-15 17:46:03,796 | INFO     | all workflow threads have been joined
[2026-01-15 12:46:03] 2026-01-15 17:46:03,796 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:46:03] 2026-01-15 17:46:03,796 | INFO     | traces error code: 0
[2026-01-15 12:46:03] 2026-01-15 17:46:03,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:46:03] 2026-01-15 17:46:03,881 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:46:03] 2026-01-15 17:46:03,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:46:03] 2026-01-15 17:46:03,885 [wrapper] pilotpid: 2786522
[2026-01-15 12:46:03] 2026-01-15 17:46:03,887 [wrapper] Pilot exit status: 0
[2026-01-15 12:46:03] 2026-01-15 17:46:03,893 [wrapper] pandaids: 6971277361
[2026-01-15 12:46:03] 2026-01-15 17:46:03,917 [wrapper] cleanup supervisor_pilot 2833172 2786523
[2026-01-15 12:46:03] 2026-01-15 17:46:03,919 [wrapper] Test setup, not cleaning
[2026-01-15 12:46:03] 2026-01-15 17:46:03,921 [wrapper] apfmon messages muted
[2026-01-15 12:46:03] 2026-01-15 17:46:03,922 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:46:03] 2026-01-15 17:46:03,924 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:46:03]  *** Error codes and diagnostics ***
[2026-01-15 12:46:03]     "exeErrorCode": 0,
[2026-01-15 12:46:03]     "exeErrorDiag": "",
[2026-01-15 12:46:03]     "pilotErrorCode": 0,
[2026-01-15 12:46:03]     "pilotErrorDiag": "",
[2026-01-15 12:46:03]  *** Listing of results directory ***
[2026-01-15 12:46:03] total 744076
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:57 queuedata.json
[2026-01-15 12:46:03] -rwx------. 1 boincer umatlas     36322 Jan 15 05:58 runpilot2-wrapper.sh
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:46:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:59 run_atlas
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:59 job.xml
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas 598661491 Jan 15 11:59 EVNT.32794306._001441.pool.root.1
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:59 start_atlas.sh
[2026-01-15 12:46:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:59 shared
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 11:59 input.tar.gz
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:59 boinc_lockfile
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas      2506 Jan 15 11:59 pandaJob.out
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas   1004091 Jan 15 11:59 agis_schedconf.cvmfs.json
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:59 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:46:03] drwx------. 5 boincer umatlas      4096 Jan 15 11:59 pilot3
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas      6529 Jan 15 12:37 init_data.xml
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas 157858071 Jan 15 12:44 HITS.48215263._052090.pool.root.1
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:44 boinc_task_state.xml
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas      1029 Jan 15 12:44 memory_monitor_summary.json
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas    318346 Jan 15 12:44 log.48215263._052090.job.log.tgz.1
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas      7818 Jan 15 12:44 heartbeat.json
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas        95 Jan 15 12:45 pilot_heartbeat.json
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:45 boinc_mmap_file
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:45 wrapper_checkpoint.txt
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas      4895 Jan 15 12:46 pilotlog.txt
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas    424526 Jan 15 12:46 log.48215263._052090.job.log.1
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas       357 Jan 15 12:46 output.list
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:46 runtime_log
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas    757760 Jan 15 12:46 result.tar.gz
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas      8816 Jan 15 12:46 runtime_log.err
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas       648 Jan 15 12:46 aqPNDmDFa08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt6uKDmKVdDym.diag
[2026-01-15 12:46:03] -rw-r--r--. 1 boincer umatlas     21582 Jan 15 12:46 stderr.txt
[2026-01-15 12:46:03] HITS file was successfully produced:
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas 157858071 Jan 15 12:44 shared/HITS.pool.root.1
[2026-01-15 12:46:03]  *** Contents of shared directory: ***
[2026-01-15 12:46:03] total 740136
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas 598661491 Jan 15 11:59 ATLAS.root_0
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:59 start_atlas.sh
[2026-01-15 12:46:03] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 11:59 input.tar.gz
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas 157858071 Jan 15 12:44 HITS.pool.root.1
[2026-01-15 12:46:03] -rw-------. 1 boincer umatlas    757760 Jan 15 12:46 result.tar.gz
12:46:05 (2782805): run_atlas exited; CPU time 21598.160537
12:46:05 (2782805): called boinc_finish(0)

</stderr_txt>
]]>

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