Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:21 (2794099): wrapper (7.7.26015): starting
11:13:21 (2794099): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 11:13:21] Arguments: --nthreads 10
[2026-01-15 11:13:21] Threads: 10
[2026-01-15 11:13:21] Checking for CVMFS
[2026-01-15 11:13:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:13:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:13:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:13:22] 2.13.3.0 12357 102228 206464 155177 1 802 29763699 32503808 37920 16776704 0 1428807413 99.600 1462024621 48508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 11:13:22] CVMFS is ok
[2026-01-15 11:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:13:22] Further information can be found at the LHC@home message board.
[2026-01-15 11:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:13:22] Checking for apptainer binary...
[2026-01-15 11:13:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:13:22] Running /usr/bin/apptainer --version
[2026-01-15 11:13:22] apptainer version 1.4.5-2.el9
[2026-01-15 11:13:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:13:22] c8-7-2.aglt2.org
[2026-01-15 11:13:22] apptainer works
[2026-01-15 11:13:22] Set ATHENA_PROC_NUMBER=10
[2026-01-15 11:13:22] Set ATHENA_CORE_NUMBER=10
[2026-01-15 11:13:22] Starting ATLAS job with PandaID=6970456119
[2026-01-15 11:13:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:09:04]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:09:04]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970456119/log.48215263._048909.job.log.tgz.1
[2026-01-15 12:09:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/f8/log.48215263._048909.job.log.tgz.1
[2026-01-15 12:09:04]  workdir=None
[2026-01-15 12:09:04] ]
[2026-01-15 12:09:04] 2026-01-15 17:08:22,036 | INFO     | transferring file log.48215263._048909.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970456119/log.48215263._048909.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 12:09:04] 2026-01-15 17:08:22,037 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970456119/log.48215263._048909.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._048909.job
[2026-01-15 12:09:04] 2026-01-15 17:08:22,054 | INFO     | adding to output.list: log.48215263._048909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/f8/log.48215263._048909.job.log.tg
[2026-01-15 12:09:04] 2026-01-15 17:08:22,055 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 12:09:04] 2026-01-15 17:08:22,055 | INFO     | summary of transferred files:
[2026-01-15 12:09:04] 2026-01-15 17:08:22,055 | INFO     |  -- lfn=log.48215263._048909.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 12:09:04] 2026-01-15 17:08:22,055 | INFO     | stage-out finished correctly
[2026-01-15 12:09:04] 2026-01-15 17:08:22,156 | INFO     | time since job start (3280s) is within the limit (349056.0s)
[2026-01-15 12:09:04] 2026-01-15 17:08:22,156 | INFO     | 3283s have passed since pilot start - server update state is 'RUNNING'
[2026-01-15 12:09:04] 2026-01-15 17:08:22,457 | WARNING  | process 2809323 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 12:09:04] 2026-01-15 17:08:22,458 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970456119/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:09:04] 2026-01-15 17:08:22,913 | INFO     | number of running child processes to parent process 2809323: 1
[2026-01-15 12:09:04] 2026-01-15 17:08:22,913 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:09:04] 2026-01-15 17:08:23,899 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:09:04] 2026-01-15 17:08:24,163 | INFO     | time since job start (3282s) is within the limit (349056.0s)
[2026-01-15 12:09:04] 2026-01-15 17:08:25,422 | INFO     | monitor loop #233: job 0:6970456119 is in state 'finished'
[2026-01-15 12:09:04] 2026-01-15 17:08:25,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:09:04] 2026-01-15 17:08:26,172 | INFO     | time since job start (3284s) is within the limit (349056.0s)
[2026-01-15 12:09:04] 2026-01-15 17:08:26,764 | INFO     | job 6970456119 has state=finished
[2026-01-15 12:09:04] 2026-01-15 17:08:26,764 | INFO     | preparing for final server update for job 6970456119 in state='finished'
[2026-01-15 12:09:04] 2026-01-15 17:08:26,765 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:09:04] 2026-01-15 17:08:26,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:09:04] 2026-01-15 17:08:26,765 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:09:04] 2026-01-15 17:08:26,765 | INFO     | job 6970456119 has finished - writing final server update
[2026-01-15 12:09:04] 2026-01-15 17:08:26,765 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:09:04] 2026-01-15 17:08:26,766 | INFO     | executing command: lscpu
[2026-01-15 12:09:04] 2026-01-15 17:08:26,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:09:04] 2026-01-15 17:08:27,926 | INFO     | monitor loop #234: job 0:6970456119 is in state 'finished'
[2026-01-15 12:09:04] 2026-01-15 17:08:27,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:09:04] 2026-01-15 17:08:28,178 | INFO     | time since job start (3286s) is within the limit (349056.0s)
[2026-01-15 12:09:04] 2026-01-15 17:08:30,183 | INFO     | time since job start (3288s) is within the limit (349056.0s)
[2026-01-15 12:09:04] 2026-01-15 17:08:30,430 | INFO     | monitor loop #235: job 0:6970456119 is in state 'finished'
[2026-01-15 12:09:04] 2026-01-15 17:08:30,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:09:04] 2026-01-15 17:08:31,888 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:09:04] 2026-01-15 17:08:31,893 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3719.5996250000003
[2026-01-15 12:09:04] 2026-01-15 17:08:31,908 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970456119/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:09:04] 2026-01-15 17:08:31,909 | INFO     | extracted standard info from prmon json
[2026-01-15 12:09:04] 2026-01-15 17:08:31,909 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:09:04] 2026-01-15 17:08:31,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:09:04] 2026-01-15 17:08:31,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:09:04] 2026-01-15 17:08:31,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | sum of square deviations: 30168007.5
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | sum of deviations: 278547899.0
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | mean x: 1768495343.5
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | mean y: 2641361.9565217393
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | intersect: -16326268073.749773
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | chi2: 0.08034863069664842
[2026-01-15 12:09:04] 2026-01-15 17:08:31,910 | INFO     | current memory leak: 9.23 B/s (using 46 data points, chi2=0.08)
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | could have reported an average CPU frequency of 3738 MHz (5 samples)
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | ..............................
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . Timing measurements:
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . get job = 0 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . initial setup = 2 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . payload setup = 13 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . stage-in = 0 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . payload execution = 3240 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . stage-out = 0 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | . log creation = 0 s
[2026-01-15 12:09:04] 2026-01-15 17:08:31,911 | INFO     | ..............................
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | 
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | job summary report
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | --------------------------------------------------
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | PanDA job id: 6970456119
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | task id: 48215263
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | errors: (none)
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | pilot state: finished 
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | transexitcode: 0
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | exeerrorcode: 0
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | exeerrordiag: 
[2026-01-15 12:09:04] 2026-01-15 17:08:32,060 | INFO     | exitcode: 0
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | exitmsg: OK
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | cpuconsumptiontime: 16286 s
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | nevents: 400
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | neventsw: 0
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | pid: 2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | pgrp: 2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | corecount: 10
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | event service: False
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | sizes: {0: 2283952, 1: 2283952, 10: 2284242, 11: 2284270, 3256: 2309858, 3258: 2318856, 3260: 2319040, 3268: 2319266}
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | --------------------------------------------------
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | 
[2026-01-15 12:09:04] 2026-01-15 17:08:32,061 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:09:04] 2026-01-15 17:08:32,080 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | job 6970456119 has completed (purged errors)
[2026-01-15 12:09:04] 2026-01-15 17:08:32,081 | INFO     | overall cleanup function is called
[2026-01-15 12:09:04] 2026-01-15 17:08:33,111 | INFO     | --- collectZombieJob: --- 10, [2809323]
[2026-01-15 12:09:04] 2026-01-15 17:08:33,111 | INFO     | zombie collector waiting for pid 2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:33,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:09:04] 2026-01-15 17:08:33,111 | INFO     | collected zombie processes
[2026-01-15 12:09:04] 2026-01-15 17:08:33,111 | INFO     | will attempt to kill all subprocesses of pid=2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:33,564 | INFO     | process IDs to be killed: [2809323] (in reverse order)
[2026-01-15 12:09:04] 2026-01-15 17:08:33,717 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:09:04] 2026-01-15 17:08:33,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:09:04] 2026-01-15 17:08:33,740 | INFO     | did not find any defunct processes belonging to 2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:33,762 | INFO     | did not find any defunct processes belonging to 2809323
[2026-01-15 12:09:04] 2026-01-15 17:08:33,763 | INFO     | ready for new job
[2026-01-15 12:09:04] 2026-01-15 17:08:33,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:09:04] 2026-01-15 17:08:33,764 | INFO     | ***************************************
[2026-01-15 12:09:04] 2026-01-15 17:08:33,764 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:09:04] 2026-01-15 17:08:33,764 | INFO     | ***************************************
[2026-01-15 12:09:04] 2026-01-15 17:08:33,764 | INFO     | 
[2026-01-15 12:09:04] 2026-01-15 17:08:33,768 | INFO     | architecture information:
[2026-01-15 12:09:04] 2026-01-15 17:08:33,768 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:09:04] 2026-01-15 17:08:33,785 | INFO     | cat /etc/os-release:
[2026-01-15 12:09:04] NAME="CentOS Linux"
[2026-01-15 12:09:04] VERSION="7 (Core)"
[2026-01-15 12:09:04] ID="centos"
[2026-01-15 12:09:04] ID_LIKE="rhel fedora"
[2026-01-15 12:09:04] VERSION_ID="7"
[2026-01-15 12:09:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:09:04] ANSI_COLOR="0;31"
[2026-01-15 12:09:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:09:04] HOME_URL="https://www.centos.org/"
[2026-01-15 12:09:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:09:04] 
[2026-01-15 12:09:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:09:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:09:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:09:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:09:04] 
[2026-01-15 12:09:04] 2026-01-15 17:08:33,785 | INFO     | ***************************************
[2026-01-15 12:09:04] 2026-01-15 17:08:34,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:09:04] 2026-01-15 17:08:34,319 | INFO     | sufficient remaining disk space (92193947648 B)
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | INFO     | update_server=False
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:09:04] 2026-01-15 17:08:34,320 | INFO     | aborting loop
[2026-01-15 12:09:04] 2026-01-15 17:08:34,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:09:04] 2026-01-15 17:08:34,725 | INFO     | all job control threads have been joined
[2026-01-15 12:09:04] 2026-01-15 17:08:34,800 | INFO     | all data control threads have been joined
[2026-01-15 12:09:04] 2026-01-15 17:08:34,928 | INFO     | all payload control threads have been joined
[2026-01-15 12:09:04] 2026-01-15 17:08:35,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:09:04] 2026-01-15 17:08:35,325 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,326 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,563 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,622 | INFO     | [job] validate thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,730 | INFO     | [job] control thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,805 | INFO     | [data] control thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,819 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:35,933 | INFO     | [payload] control thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:36,114 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:36,380 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:36,639 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:36,825 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:36,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:09:04] 2026-01-15 17:08:37,145 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:37,989 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:38,478 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:44,720 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:09:04] 2026-01-15 17:08:45,725 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:09:04] 2026-01-15 17:08:47,123 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:09:04] 2026-01-15 17:08:49,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843735332672)>', '<ExcThread(monitor, started 139842650367744)>']
[2026-01-15 12:09:04] 2026-01-15 17:08:54,027 | INFO     | all workflow threads have been joined
[2026-01-15 12:09:04] 2026-01-15 17:08:54,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:09:04] 2026-01-15 17:08:54,027 | INFO     | traces error code: 0
[2026-01-15 12:09:04] 2026-01-15 17:08:54,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:09:04] 2026-01-15 17:09:03,837 | INFO     | PID=2798966 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:09:04] 2026-01-15 17:09:03,838 | INFO     | .. there are 31 such processes running
[2026-01-15 12:09:04] 2026-01-15 17:09:03,838 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:09:04] 2026-01-15 17:09:03,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:09:04] 2026-01-15 17:09:03,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:09:04] 2026-01-15 17:09:03,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:09:04] 2026-01-15 17:09:03,839 | INFO     | [monitor] control thread has ended
[2026-01-15 12:09:04] 2026-01-15 17:09:03,998 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:09:04] 2026-01-15 17:09:04,003 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:09:04] 2026-01-15 17:09:04,007 [wrapper] pilotpid: 2798966
[2026-01-15 12:09:04] 2026-01-15 17:09:04,010 [wrapper] Pilot exit status: 0
[2026-01-15 12:09:04] 2026-01-15 17:09:04,037 [wrapper] pandaids: 6970456119
[2026-01-15 12:09:04] 2026-01-15 17:09:04,158 [wrapper] cleanup supervisor_pilot 3258647 2798967
[2026-01-15 12:09:04] 2026-01-15 17:09:04,163 [wrapper] Test setup, not cleaning
[2026-01-15 12:09:04] 2026-01-15 17:09:04,168 [wrapper] apfmon messages muted
[2026-01-15 12:09:04] 2026-01-15 17:09:04,172 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:09:04] 2026-01-15 17:09:04,175 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:09:04]  *** Error codes and diagnostics ***
[2026-01-15 12:09:04]     "exeErrorCode": 0,
[2026-01-15 12:09:04]     "exeErrorDiag": "",
[2026-01-15 12:09:04]     "pilotErrorCode": 0,
[2026-01-15 12:09:04]     "pilotErrorDiag": "",
[2026-01-15 12:09:04]  *** Listing of results directory ***
[2026-01-15 12:09:04] total 743888
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 12:09:04] -rwx------. 1 boincer umatlas     36322 Jan 15 01:56 runpilot2-wrapper.sh
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:09:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:13 run_atlas
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:13 job.xml
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas 601515190 Jan 15 11:13 EVNT.32794306._001898.pool.root.1
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:13 start_atlas.sh
[2026-01-15 12:09:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:13 shared
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 11:13 input.tar.gz
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:13 boinc_lockfile
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 11:13 pandaJob.out
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas        57 Jan 15 11:13 setup.sh.local
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas   1004083 Jan 15 11:13 agis_schedconf.cvmfs.json
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:13 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:09:04] drwx------. 5 boincer umatlas      4096 Jan 15 11:13 pilot3
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 12:01 init_data.xml
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas 154631897 Jan 15 12:07 HITS.48215263._048909.pool.root.1
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:08 boinc_task_state.xml
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas      1048 Jan 15 12:08 memory_monitor_summary.json
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas    337551 Jan 15 12:08 log.48215263._048909.job.log.tgz.1
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas      7804 Jan 15 12:08 heartbeat.json
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:09 wrapper_checkpoint.txt
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:09 boinc_mmap_file
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas       823 Jan 15 12:09 pilotlog.txt
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas        95 Jan 15 12:09 pilot_heartbeat.json
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas    492815 Jan 15 12:09 log.48215263._048909.job.log.1
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas       357 Jan 15 12:09 output.list
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:09 runtime_log
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas    849920 Jan 15 12:09 result.tar.gz
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas      9334 Jan 15 12:09 runtime_log.err
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas       655 Jan 15 12:09 MmDNDmMSW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcOoKDmEkcQMn.diag
[2026-01-15 12:09:04] -rw-r--r--. 1 boincer umatlas     22362 Jan 15 12:09 stderr.txt
[2026-01-15 12:09:04] HITS file was successfully produced:
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas 154631897 Jan 15 12:07 shared/HITS.pool.root.1
[2026-01-15 12:09:04]  *** Contents of shared directory: ***
[2026-01-15 12:09:04] total 739864
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas 601515190 Jan 15 11:13 ATLAS.root_0
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:13 start_atlas.sh
[2026-01-15 12:09:04] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 11:13 input.tar.gz
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas 154631897 Jan 15 12:07 HITS.pool.root.1
[2026-01-15 12:09:04] -rw-------. 1 boincer umatlas    849920 Jan 15 12:09 result.tar.gz
12:09:05 (2794099): run_atlas exited; CPU time 16350.780689
12:09:05 (2794099): called boinc_finish(0)

</stderr_txt>
]]>

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