Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:59:36 (2096481): wrapper (7.7.26015): starting
10:59:36 (2096481): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:59:36] Arguments: --nthreads 8
[2026-01-15 10:59:36] Threads: 8
[2026-01-15 10:59:36] Checking for CVMFS
[2026-01-15 10:59:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:59:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:59:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:59:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:59:38] 2.13.3.0 7314 102200 162856 155177 1 240 27632425 40960000 35602 16776704 0 1249850477 99.710 942521331 50046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:59:38] CVMFS is ok
[2026-01-15 10:59:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:59:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:59:38] Further information can be found at the LHC@home message board.
[2026-01-15 10:59:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:59:38] Checking for apptainer binary...
[2026-01-15 10:59:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:59:38] Running /usr/bin/apptainer --version
[2026-01-15 10:59:38] apptainer version 1.4.5-2.el9
[2026-01-15 10:59:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:59:39] c8-16-1.aglt2.org
[2026-01-15 10:59:39] apptainer works
[2026-01-15 10:59:39] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:59:39] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:59:39] Starting ATLAS job with PandaID=6971199834
[2026-01-15 10:59:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:32:42]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:32:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 11:32:42]  replicas=None
[2026-01-15 11:32:42]  scope=mc16_13TeV
[2026-01-15 11:32:42]  status=None
[2026-01-15 11:32:42]  status_code=0
[2026-01-15 11:32:42]  storage_token=
[2026-01-15 11:32:42]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6971199834/log.47962010._003519.job.log.tgz.1
[2026-01-15 11:32:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/a9/log.47962010._003519.job.log.tgz.1
[2026-01-15 11:32:42]  workdir=None
[2026-01-15 11:32:42] ]
[2026-01-15 11:32:42] 2026-01-15 16:31:59,103 | INFO     | transferring file log.47962010._003519.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6971199834/log.47962010._003519.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:32:42] 2026-01-15 16:31:59,103 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6971199834/log.47962010._003519.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._003519.job
[2026-01-15 11:32:42] 2026-01-15 16:31:59,133 | INFO     | adding to output.list: log.47962010._003519.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/a9/log.47962010._003519.job.log.tgz.
[2026-01-15 11:32:42] 2026-01-15 16:31:59,134 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:32:42] 2026-01-15 16:31:59,134 | INFO     | summary of transferred files:
[2026-01-15 11:32:42] 2026-01-15 16:31:59,134 | INFO     |  -- lfn=log.47962010._003519.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:32:42] 2026-01-15 16:31:59,134 | INFO     | stage-out finished correctly
[2026-01-15 11:32:42] 2026-01-15 16:31:59,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:32:42] 2026-01-15 16:31:59,918 | INFO     | job 6971199834 has state=finished
[2026-01-15 11:32:42] 2026-01-15 16:31:59,918 | INFO     | preparing for final server update for job 6971199834 in state='finished'
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | job 6971199834 has finished - writing final server update
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | total number of processed events: 50 (read)
[2026-01-15 11:32:42] 2026-01-15 16:31:59,919 | INFO     | executing command: lscpu
[2026-01-15 11:32:42] 2026-01-15 16:31:59,989 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:32:42] 2026-01-15 16:32:00,217 | INFO     | time since job start (1887s) is within the limit (349056.0s)
[2026-01-15 11:32:42] 2026-01-15 16:32:00,985 | INFO     | monitor loop #133: job 0:6971199834 is in state 'finished'
[2026-01-15 11:32:42] 2026-01-15 16:32:00,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:42] 2026-01-15 16:32:02,233 | INFO     | time since job start (1889s) is within the limit (349056.0s)
[2026-01-15 11:32:42] 2026-01-15 16:32:03,492 | INFO     | monitor loop #134: job 0:6971199834 is in state 'finished'
[2026-01-15 11:32:42] 2026-01-15 16:32:03,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:42] 2026-01-15 16:32:04,246 | INFO     | time since job start (1891s) is within the limit (349056.0s)
[2026-01-15 11:32:42] 2026-01-15 16:32:05,996 | INFO     | monitor loop #135: job 0:6971199834 is in state 'finished'
[2026-01-15 11:32:42] 2026-01-15 16:32:05,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:42] 2026-01-15 16:32:06,253 | INFO     | time since job start (1893s) is within the limit (349056.0s)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,260 | INFO     | time since job start (1895s) is within the limit (349056.0s)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,501 | INFO     | monitor loop #136: job 0:6971199834 is in state 'finished'
[2026-01-15 11:32:42] 2026-01-15 16:32:08,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,720 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:32:42] 2026-01-15 16:32:08,724 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3763.760164062502
[2026-01-15 11:32:42] 2026-01-15 16:32:08,736 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6971199834/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,736 | INFO     | extracted standard info from prmon json
[2026-01-15 11:32:42] 2026-01-15 16:32:08,737 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:32:42] 2026-01-15 16:32:08,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:32:42] 2026-01-15 16:32:08,737 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:32:42] 2026-01-15 16:32:08,737 | INFO     | sum of square deviations: 3764807.6521739126
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | sum of deviations: -3414644992.695652
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | mean x: 1768493863.4347825
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | mean y: 2463628.8695652173
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | intersect: 1604009699404.5398
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | chi2: 1.1988021292019266
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | current memory leak: -906.99 B/s (using 23 data points, chi2=1.20)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | could have reported an average CPU frequency of 3785 MHz (5 samples)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | ..............................
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . Timing measurements:
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . get job = 0 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . initial setup = 4 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . payload setup = 12 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . stage-in = 0 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . payload execution = 1836 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . stage-out = 0 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | . log creation = 0 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,738 | INFO     | ..............................
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | 
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | job summary report
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | --------------------------------------------------
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | PanDA job id: 6971199834
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | task id: 47962010
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | errors: (none)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | pilot state: finished 
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | transexitcode: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:08,912 | INFO     | exeerrorcode: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | exeerrordiag: 
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | exitcode: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | exitmsg: OK
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | cpuconsumptiontime: 7534 s
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | nevents: 50
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | neventsw: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | pid: 2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | pgrp: 2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | corecount: 8
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | event service: False
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | sizes: {0: 2284619, 11: 2284619, 17: 2284909, 22: 2284937, 1852: 2310662, 1853: 2310661, 1854: 2319895, 1864: 2320117}
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | --------------------------------------------------
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | 
[2026-01-15 11:32:42] 2026-01-15 16:32:08,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-15 11:32:42] 2026-01-15 16:32:08,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | job 6971199834 has completed (purged errors)
[2026-01-15 11:32:42] 2026-01-15 16:32:08,980 | INFO     | overall cleanup function is called
[2026-01-15 11:32:42] 2026-01-15 16:32:09,994 | INFO     | --- collectZombieJob: --- 10, [2129130]
[2026-01-15 11:32:42] 2026-01-15 16:32:09,994 | INFO     | zombie collector waiting for pid 2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:09,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:32:42] 2026-01-15 16:32:09,994 | INFO     | collected zombie processes
[2026-01-15 11:32:42] 2026-01-15 16:32:09,994 | INFO     | will attempt to kill all subprocesses of pid=2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:10,575 | INFO     | process IDs to be killed: [2129130] (in reverse order)
[2026-01-15 11:32:42] 2026-01-15 16:32:10,759 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:32:42] 2026-01-15 16:32:10,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:32:42] 2026-01-15 16:32:10,782 | INFO     | did not find any defunct processes belonging to 2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:10,806 | INFO     | did not find any defunct processes belonging to 2129130
[2026-01-15 11:32:42] 2026-01-15 16:32:10,806 | INFO     | ready for new job
[2026-01-15 11:32:42] 2026-01-15 16:32:10,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:32:42] 2026-01-15 16:32:10,807 | INFO     | ***************************************
[2026-01-15 11:32:42] 2026-01-15 16:32:10,807 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:32:42] 2026-01-15 16:32:10,807 | INFO     | ***************************************
[2026-01-15 11:32:42] 2026-01-15 16:32:10,807 | INFO     | 
[2026-01-15 11:32:42] 2026-01-15 16:32:10,812 | INFO     | architecture information:
[2026-01-15 11:32:42] 2026-01-15 16:32:10,813 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:32:42] 2026-01-15 16:32:10,825 | INFO     | cat /etc/os-release:
[2026-01-15 11:32:42] NAME="CentOS Linux"
[2026-01-15 11:32:42] VERSION="7 (Core)"
[2026-01-15 11:32:42] ID="centos"
[2026-01-15 11:32:42] ID_LIKE="rhel fedora"
[2026-01-15 11:32:42] VERSION_ID="7"
[2026-01-15 11:32:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:32:42] ANSI_COLOR="0;31"
[2026-01-15 11:32:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:32:42] HOME_URL="https://www.centos.org/"
[2026-01-15 11:32:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:32:42] 
[2026-01-15 11:32:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:32:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:32:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:32:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:32:42] 
[2026-01-15 11:32:42] 2026-01-15 16:32:10,826 | INFO     | ***************************************
[2026-01-15 11:32:42] 2026-01-15 16:32:11,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-15 11:32:42] 2026-01-15 16:32:11,424 | INFO     | sufficient remaining disk space (164570857472 B)
[2026-01-15 11:32:42] 2026-01-15 16:32:11,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:32:42] 2026-01-15 16:32:11,425 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:32:42] 2026-01-15 16:32:11,425 | INFO     | update_server=False
[2026-01-15 11:32:42] 2026-01-15 16:32:11,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:32:42] 2026-01-15 16:32:11,557 | INFO     | all job control threads have been joined
[2026-01-15 11:32:42] 2026-01-15 16:32:11,648 | INFO     | all data control threads have been joined
[2026-01-15 11:32:42] 2026-01-15 16:32:12,003 | INFO     | all payload control threads have been joined
[2026-01-15 11:32:42] 2026-01-15 16:32:12,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:32:42] 2026-01-15 16:32:12,013 | INFO     | aborting loop
[2026-01-15 11:32:42] 2026-01-15 16:32:12,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:32:42] 2026-01-15 16:32:12,430 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:12,563 | INFO     | [job] control thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:12,654 | INFO     | [data] control thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:12,810 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:12,815 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:12,977 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,009 | INFO     | [payload] control thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,013 | INFO     | [job] validate thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,018 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,247 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,748 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:32:42] 2026-01-15 16:32:13,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:13,933 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:14,211 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:14,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:32:42] 2026-01-15 16:32:14,813 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:18,291 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:32:42] 2026-01-15 16:32:36,164 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:32:42] 2026-01-15 16:32:36,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016476481344)>', '<ExcThread(monitor, started 140015858345728)>']
[2026-01-15 11:32:42] 2026-01-15 16:32:41,339 | INFO     | all workflow threads have been joined
[2026-01-15 11:32:42] 2026-01-15 16:32:41,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:32:42] 2026-01-15 16:32:41,339 | INFO     | traces error code: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:41,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | INFO     | PID=2106686 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | INFO     | .. there are 31 such processes running
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:32:42] 2026-01-15 16:32:41,977 | INFO     | [monitor] control thread has ended
[2026-01-15 11:32:42] 2026-01-15 16:32:42,076 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:32:42] 2026-01-15 16:32:42,079 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:32:42] 2026-01-15 16:32:42,081 [wrapper] pilotpid: 2106686
[2026-01-15 11:32:42] 2026-01-15 16:32:42,083 [wrapper] Pilot exit status: 0
[2026-01-15 11:32:42] 2026-01-15 16:32:42,150 [wrapper] pandaids: 6971199834
[2026-01-15 11:32:42] 2026-01-15 16:32:42,273 [wrapper] cleanup supervisor_pilot 2348488 2106687
[2026-01-15 11:32:42] 2026-01-15 16:32:42,275 [wrapper] Test setup, not cleaning
[2026-01-15 11:32:42] 2026-01-15 16:32:42,278 [wrapper] apfmon messages muted
[2026-01-15 11:32:42] 2026-01-15 16:32:42,281 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:32:42] 2026-01-15 16:32:42,287 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:32:42]  *** Error codes and diagnostics ***
[2026-01-15 11:32:42]     "exeErrorCode": 0,
[2026-01-15 11:32:42]     "exeErrorDiag": "",
[2026-01-15 11:32:42]     "pilotErrorCode": 0,
[2026-01-15 11:32:42]     "pilotErrorDiag": "",
[2026-01-15 11:32:42]  *** Listing of results directory ***
[2026-01-15 11:32:42] total 431916
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:40 queuedata.json
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 11:32:42] -rwx------. 1 boincer umatlas     36322 Jan 15 05:40 runpilot2-wrapper.sh
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:32:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:59 run_atlas
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:59 job.xml
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas 392755774 Jan 15 10:59 EVNT.47962006._000073.pool.root.1
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 10:59 start_atlas.sh
[2026-01-15 11:32:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:59 shared
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas    592619 Jan 15 10:59 input.tar.gz
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:59 boinc_lockfile
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas      2890 Jan 15 10:59 pandaJob.out
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas        57 Jan 15 10:59 setup.sh.local
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas   1004083 Jan 15 11:00 agis_schedconf.cvmfs.json
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:00 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:32:42] drwx------. 5 boincer umatlas      4096 Jan 15 11:00 pilot3
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas       528 Jan 15 11:24 boinc_task_state.xml
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 11:29 init_data.xml
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas  42685008 Jan 15 11:31 HITS.47962010._003519.pool.root.1
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas      1048 Jan 15 11:31 memory_monitor_summary.json
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas   1137447 Jan 15 11:31 log.47962010._003519.job.log.tgz.1
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas        95 Jan 15 11:32 pilot_heartbeat.json
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas      8555 Jan 15 11:32 heartbeat.json
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:32 boinc_mmap_file
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas        26 Jan 15 11:32 wrapper_checkpoint.txt
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas       823 Jan 15 11:32 pilotlog.txt
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas    312565 Jan 15 11:32 log.47962010._003519.job.log.1
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas       353 Jan 15 11:32 output.list
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:32 runtime_log
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas   1474560 Jan 15 11:32 result.tar.gz
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas      9336 Jan 15 11:32 runtime_log.err
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas       654 Jan 15 11:32 8PsMDmKxZ08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi3uKDmPGiBCo.diag
[2026-01-15 11:32:42] -rw-r--r--. 1 boincer umatlas     22022 Jan 15 11:32 stderr.txt
[2026-01-15 11:32:42] HITS file was successfully produced:
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas 42685008 Jan 15 11:31 shared/HITS.pool.root.1
[2026-01-15 11:32:42]  *** Contents of shared directory: ***
[2026-01-15 11:32:42] total 427280
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas 392755774 Jan 15 10:59 ATLAS.root_0
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 10:59 start_atlas.sh
[2026-01-15 11:32:42] -rw-r--r--. 2 boincer umatlas    592619 Jan 15 10:59 input.tar.gz
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas  42685008 Jan 15 11:31 HITS.pool.root.1
[2026-01-15 11:32:42] -rw-------. 1 boincer umatlas   1474560 Jan 15 11:32 result.tar.gz
11:32:43 (2096481): run_atlas exited; CPU time 7546.693341
11:32:43 (2096481): called boinc_finish(0)

</stderr_txt>
]]>

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