Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:24:15 (989847): wrapper (7.7.26015): starting
15:24:15 (989847): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 15:24:15] Arguments: --nthreads 4
[2026-01-15 15:24:15] Threads: 4
[2026-01-15 15:24:15] Checking for CVMFS
[2026-01-15 15:24:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 15:24:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 15:24:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 15:24:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 15:24:15] 2.13.3.0 3426809 2158 52664 155185 0 188 3630648 6144000 6454 130560 0 14243331 99.998 85508 951 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-15 15:24:15] CVMFS is ok
[2026-01-15 15:24:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 15:24:15] Checking for apptainer binary...
[2026-01-15 15:24:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 15:24:15] Running /usr/bin/apptainer --version
[2026-01-15 15:24:15] apptainer version 1.4.5
[2026-01-15 15:24:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 15:24:15] Starfish-Cruncher
[2026-01-15 15:24:15] apptainer works
[2026-01-15 15:24:15] Set ATHENA_PROC_NUMBER=4
[2026-01-15 15:24:15] Set ATHENA_CORE_NUMBER=4
[2026-01-15 15:24:15] Starting ATLAS job with PandaID=6970457098
[2026-01-15 15:24:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 16:56:01]  *** The last 200 lines of the pilot log: ***
[2026-01-15 16:56:01]  replicas=None
[2026-01-15 16:56:01]  scope=mc23_13p6TeV
[2026-01-15 16:56:01]  status=None
[2026-01-15 16:56:01]  status_code=0
[2026-01-15 16:56:01]  storage_token=
[2026-01-15 16:56:01]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6970457098/log.48188632._000032.job.log.tgz.1
[2026-01-15 16:56:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/64/log.48188632._000032.job.log.tgz.1
[2026-01-15 16:56:01]  workdir=None
[2026-01-15 16:56:01] ]
[2026-01-15 16:56:01] 2026-01-15 22:55:22,021 | INFO     | transferring file log.48188632._000032.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6970457098/log.48188632._000032.job.log.tgz.1 to /var/lib/boinc
[2026-01-15 16:56:01] 2026-01-15 22:55:22,021 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6970457098/log.48188632._000032.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.481886
[2026-01-15 16:56:01] 2026-01-15 22:55:22,031 | INFO     | adding to output.list: log.48188632._000032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/64/log.48188632._000032.job.log.tg
[2026-01-15 16:56:01] 2026-01-15 22:55:22,031 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 16:56:01] 2026-01-15 22:55:22,032 | INFO     | summary of transferred files:
[2026-01-15 16:56:01] 2026-01-15 22:55:22,032 | INFO     |  -- lfn=log.48188632._000032.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 16:56:01] 2026-01-15 22:55:22,032 | INFO     | stage-out finished correctly
[2026-01-15 16:56:01] 2026-01-15 22:55:22,790 | INFO     | monitor loop #410: job 0:6970457098 is in state 'finished'
[2026-01-15 16:56:01] 2026-01-15 22:55:22,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:56:01] 2026-01-15 22:55:23,722 | INFO     | time since job start (5458s) is within the limit (349056.0s)
[2026-01-15 16:56:01] 2026-01-15 22:55:24,645 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 16:56:01] 2026-01-15 22:55:25,293 | INFO     | monitor loop #411: job 0:6970457098 is in state 'finished'
[2026-01-15 16:56:01] 2026-01-15 22:55:25,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:56:01] 2026-01-15 22:55:25,727 | INFO     | time since job start (5460s) is within the limit (349056.0s)
[2026-01-15 16:56:01] 2026-01-15 22:55:26,826 | INFO     | PID=993737 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 16:56:01] 2026-01-15 22:55:26,826 | INFO     | .. there are 2 such processes running
[2026-01-15 16:56:01] 2026-01-15 22:55:26,909 | INFO     | job 6970457098 has state=finished
[2026-01-15 16:56:01] 2026-01-15 22:55:26,909 | INFO     | preparing for final server update for job 6970457098 in state='finished'
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | this job has now completed (state=finished)
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | log transfer has been attempted: DONE
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | job 6970457098 has finished - writing final server update
[2026-01-15 16:56:01] 2026-01-15 22:55:27,138 | INFO     | total number of processed events: 400 (read)
[2026-01-15 16:56:01] 2026-01-15 22:55:27,139 | INFO     | executing command: lscpu
[2026-01-15 16:56:01] 2026-01-15 22:55:27,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 16:56:01] 2026-01-15 22:55:27,796 | INFO     | monitor loop #412: job 0:6970457098 is in state 'finished'
[2026-01-15 16:56:01] 2026-01-15 22:55:27,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:56:01] 2026-01-15 22:55:27,826 | INFO     | time since job start (5462s) is within the limit (349056.0s)
[2026-01-15 16:56:01] 2026-01-15 22:55:28,956 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 16:56:01] 2026-01-15 22:55:28,959 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3524.09778125
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6970457098/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | INFO     | extracted standard info from prmon json
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 16:56:01] 2026-01-15 22:55:28,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | fitting pss+swap vs Time
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | sum of square deviations: 177275882.0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | sum of deviations: -5845906024.999999
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | mean x: 1768515094.0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | mean y: 2410170.048192771
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | intersect: 58321527957.98304
[2026-01-15 16:56:01] 2026-01-15 22:55:28,962 | INFO     | chi2: 0.011354842703086562
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | current memory leak: -32.98 B/s (using 83 data points, chi2=0.01)
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | could have reported an average CPU frequency of 3585 MHz (7 samples)
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | ..............................
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . Timing measurements:
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . get job = 0 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . initial setup = 2 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . payload setup = 4 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . stage-in = 0 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . payload execution = 5434 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . stage-out = 0 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | . log creation = 0 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,963 | INFO     | ..............................
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | 
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | job summary report
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | --------------------------------------------------
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | PanDA job id: 6970457098
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | task id: 48188632
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | errors: (none)
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | pilot state: finished 
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | transexitcode: 0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | exeerrorcode: 0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | exeerrordiag: 
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | exitcode: 0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | exitmsg: OK
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | cpuconsumptiontime: 20736 s
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | nevents: 400
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | neventsw: 0
[2026-01-15 16:56:01] 2026-01-15 22:55:28,992 | INFO     | pid: 1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | pgrp: 1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | corecount: 4
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | event service: False
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | sizes: {0: 2284112, 4: 2284374, 11: 2284402, 5442: 2311083, 5443: 2320095, 5445: 2320151, 5450: 2320473}
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | --------------------------------------------------
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | 
[2026-01-15 16:56:01] 2026-01-15 22:55:28,993 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-15 16:56:01] 2026-01-15 22:55:29,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,003 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | job 6970457098 has completed (purged errors)
[2026-01-15 16:56:01] 2026-01-15 22:55:29,004 | INFO     | overall cleanup function is called
[2026-01-15 16:56:01] 2026-01-15 22:55:30,011 | INFO     | --- collectZombieJob: --- 10, [1000569]
[2026-01-15 16:56:01] 2026-01-15 22:55:30,011 | INFO     | zombie collector waiting for pid 1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:30,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 16:56:01] 2026-01-15 22:55:30,011 | INFO     | collected zombie processes
[2026-01-15 16:56:01] 2026-01-15 22:55:30,011 | INFO     | will attempt to kill all subprocesses of pid=1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:30,089 | INFO     | process IDs to be killed: [1000569] (in reverse order)
[2026-01-15 16:56:01] 2026-01-15 22:55:30,120 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 16:56:01] 2026-01-15 22:55:30,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 16:56:01] 2026-01-15 22:55:30,123 | INFO     | did not find any defunct processes belonging to 1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:30,125 | INFO     | did not find any defunct processes belonging to 1000569
[2026-01-15 16:56:01] 2026-01-15 22:55:30,125 | INFO     | ready for new job
[2026-01-15 16:56:01] 2026-01-15 22:55:30,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 16:56:01] 2026-01-15 22:55:30,126 | INFO     | ***************************************
[2026-01-15 16:56:01] 2026-01-15 22:55:30,126 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 16:56:01] 2026-01-15 22:55:30,126 | INFO     | ***************************************
[2026-01-15 16:56:01] 2026-01-15 22:55:30,126 | INFO     | 
[2026-01-15 16:56:01] 2026-01-15 22:55:30,127 | INFO     | architecture information:
[2026-01-15 16:56:01] 2026-01-15 22:55:30,127 | INFO     | executing command: cat /etc/os-release
[2026-01-15 16:56:01] 2026-01-15 22:55:30,134 | INFO     | cat /etc/os-release:
[2026-01-15 16:56:01] NAME="CentOS Linux"
[2026-01-15 16:56:01] VERSION="7 (Core)"
[2026-01-15 16:56:01] ID="centos"
[2026-01-15 16:56:01] ID_LIKE="rhel fedora"
[2026-01-15 16:56:01] VERSION_ID="7"
[2026-01-15 16:56:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 16:56:01] ANSI_COLOR="0;31"
[2026-01-15 16:56:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 16:56:01] HOME_URL="https://www.centos.org/"
[2026-01-15 16:56:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 16:56:01] 
[2026-01-15 16:56:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 16:56:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 16:56:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 16:56:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 16:56:01] 
[2026-01-15 16:56:01] 2026-01-15 22:55:30,135 | INFO     | ***************************************
[2026-01-15 16:56:01] 2026-01-15 22:55:30,637 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | INFO     | sufficient remaining disk space (1819369537536 B)
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | INFO     | update_server=False
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 16:56:01] 2026-01-15 22:55:30,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:56:01] 2026-01-15 22:55:30,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 16:56:01] 2026-01-15 22:55:30,914 | INFO     | all data control threads have been joined
[2026-01-15 16:56:01] 2026-01-15 22:55:31,197 | INFO     | all payload control threads have been joined
[2026-01-15 16:56:01] 2026-01-15 22:55:31,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:56:01] 2026-01-15 22:55:31,305 | INFO     | aborting loop
[2026-01-15 16:56:01] 2026-01-15 22:55:31,651 | INFO     | [job] retrieve thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:31,652 | INFO     | [job] queue monitor thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:31,851 | INFO     | [payload] validate_post thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:31,919 | INFO     | [data] control thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,128 | INFO     | [job] validate thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,202 | INFO     | [payload] control thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,305 | INFO     | all job control threads have been joined
[2026-01-15 16:56:01] 2026-01-15 22:55:32,310 | INFO     | [job] job monitor thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,381 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,519 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,521 | INFO     | [data] copytool_in thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,521 | INFO     | [payload] failed_post thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,652 | INFO     | [data] copytool_out thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,720 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:32,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:33,108 | INFO     | [monitor] cgroup control has ended
[2026-01-15 16:56:01] 2026-01-15 22:55:33,311 | INFO     | [job] control thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:34,687 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 16:56:01] 2026-01-15 22:55:35,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129127549871936)>', '<ExcThread(monitor, started 129127268976384)>']
[2026-01-15 16:56:01] 2026-01-15 22:55:40,978 | INFO     | all workflow threads have been joined
[2026-01-15 16:56:01] 2026-01-15 22:55:40,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 16:56:01] 2026-01-15 22:55:40,978 | INFO     | traces error code: 0
[2026-01-15 16:56:01] 2026-01-15 22:55:40,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 16:56:01] 2026-01-15 22:56:00,986 | INFO     | PID=993737 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 16:56:01] 2026-01-15 22:56:00,986 | INFO     | .. there are 2 such processes running
[2026-01-15 16:56:01] 2026-01-15 22:56:00,987 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 16:56:01] 2026-01-15 22:56:00,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 16:56:01] 2026-01-15 22:56:00,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 16:56:01] 2026-01-15 22:56:00,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 16:56:01] 2026-01-15 22:56:00,987 | INFO     | [monitor] control thread has ended
[2026-01-15 16:56:01] 2026-01-15 22:56:01,032 [wrapper] ==== pilot stdout END ====
[2026-01-15 16:56:01] 2026-01-15 22:56:01,034 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 16:56:01] 2026-01-15 22:56:01,035 [wrapper] pilotpid: 993737
[2026-01-15 16:56:01] 2026-01-15 22:56:01,037 [wrapper] Pilot exit status: 0
[2026-01-15 16:56:01] 2026-01-15 22:56:01,042 [wrapper] pandaids: 6970457098
[2026-01-15 16:56:01] 2026-01-15 22:56:01,062 [wrapper] cleanup supervisor_pilot 1122392 993738
[2026-01-15 16:56:01] 2026-01-15 22:56:01,064 [wrapper] Test setup, not cleaning
[2026-01-15 16:56:01] 2026-01-15 22:56:01,065 [wrapper] apfmon messages muted
[2026-01-15 16:56:01] 2026-01-15 22:56:01,066 [wrapper] ==== wrapper stdout END ====
[2026-01-15 16:56:01] 2026-01-15 22:56:01,068 [wrapper] ==== wrapper stderr END ====
[2026-01-15 16:56:01]  *** Error codes and diagnostics ***
[2026-01-15 16:56:01]     "exeErrorCode": 0,
[2026-01-15 16:56:01]     "exeErrorDiag": "",
[2026-01-15 16:56:01]     "pilotErrorCode": 0,
[2026-01-15 16:56:01]     "pilotErrorDiag": "",
[2026-01-15 16:56:01]  *** Listing of results directory ***
[2026-01-15 16:56:01] total 479732
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc    584422 Jan 15 04:40 pilot3.tar.gz
[2026-01-15 16:56:01] -rwx------ 1 boinc boinc     36322 Jan 15 04:44 runpilot2-wrapper.sh
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc      5111 Jan 15 04:44 queuedata.json
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc       100 Jan 15 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 16:56:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 15:24 run_atlas
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc       105 Jan 15 15:24 job.xml
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc      9664 Jan 15 15:24 init_data.xml
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc 288941216 Jan 15 15:24 EVNT.48188630._000002.pool.root.1
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc     15845 Jan 15 15:24 start_atlas.sh
[2026-01-15 16:56:01] drwxrwx--x 2 boinc boinc      4096 Jan 15 15:24 shared
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc    592399 Jan 15 15:24 input.tar.gz
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc         0 Jan 15 15:24 boinc_lockfile
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc      2615 Jan 15 15:24 pandaJob.out
[2026-01-15 16:56:01] -rw------- 1 boinc boinc   1004083 Jan 15 15:24 agis_schedconf.cvmfs.json
[2026-01-15 16:56:01] -rw------- 1 boinc boinc   1516246 Jan 15 15:24 agis_ddmendpoints.agis.ALL.json
[2026-01-15 16:56:01] drwx------ 5 boinc boinc      4096 Jan 15 15:24 pilot3
[2026-01-15 16:56:01] -rw------- 1 boinc boinc 196153093 Jan 15 16:55 HITS.48188632._000032.pool.root.1
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc       530 Jan 15 16:55 boinc_task_state.xml
[2026-01-15 16:56:01] -rw------- 1 boinc boinc      1019 Jan 15 16:55 memory_monitor_summary.json
[2026-01-15 16:56:01] -rw------- 1 boinc boinc    299852 Jan 15 16:55 log.48188632._000032.job.log.tgz.1
[2026-01-15 16:56:01] -rw------- 1 boinc boinc      7742 Jan 15 16:55 heartbeat.json
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc      8192 Jan 15 16:55 boinc_mmap_file
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc        27 Jan 15 16:55 wrapper_checkpoint.txt
[2026-01-15 16:56:01] -rw------- 1 boinc boinc       821 Jan 15 16:56 pilotlog.txt
[2026-01-15 16:56:01] -rw------- 1 boinc boinc        95 Jan 15 16:56 pilot_heartbeat.json
[2026-01-15 16:56:01] -rw------- 1 boinc boinc    809866 Jan 15 16:56 log.48188632._000032.job.log.1
[2026-01-15 16:56:01] -rw------- 1 boinc boinc       357 Jan 15 16:56 output.list
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc       620 Jan 15 16:56 runtime_log
[2026-01-15 16:56:01] -rw------- 1 boinc boinc   1126400 Jan 15 16:56 result.tar.gz
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc      8932 Jan 15 16:56 runtime_log.err
[2026-01-15 16:56:01] -rw------- 1 boinc boinc       651 Jan 15 16:56 pVQODmD1Z08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjroKDmyHr8Un.diag
[2026-01-15 16:56:01] -rw-r--r-- 1 boinc boinc     21703 Jan 15 16:56 stderr.txt
[2026-01-15 16:56:01] HITS file was successfully produced:
[2026-01-15 16:56:01] -rw------- 1 boinc boinc 196153093 Jan 15 16:55 shared/HITS.pool.root.1
[2026-01-15 16:56:01]  *** Contents of shared directory: ***
[2026-01-15 16:56:01] total 475432
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc 288941216 Jan 15 15:24 ATLAS.root_0
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc     15845 Jan 15 15:24 start_atlas.sh
[2026-01-15 16:56:01] -rw-r--r-- 2 boinc boinc    592399 Jan 15 15:24 input.tar.gz
[2026-01-15 16:56:01] -rw------- 1 boinc boinc 196153093 Jan 15 16:55 HITS.pool.root.1
[2026-01-15 16:56:01] -rw------- 1 boinc boinc   1126400 Jan 15 16:56 result.tar.gz
16:56:02 (989847): run_atlas exited; CPU time 20804.515641
16:56:02 (989847): called boinc_finish(0)

</stderr_txt>
]]>

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