Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:15:15 (943066): wrapper (7.7.26015): starting
15:15:15 (943066): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 15:15:15] Arguments: --nthreads 4
[2026-01-15 15:15:15] Threads: 4
[2026-01-15 15:15:15] Checking for CVMFS
[2026-01-15 15:15:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 15:15:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 15:15:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 15:15:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 15:15:15] 2.13.3.0 3426809 2149 52088 155184 0 188 3627467 6144000 6454 130560 0 14120794 99.998 84170 941 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-15 15:15:15] CVMFS is ok
[2026-01-15 15:15:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 15:15:15] Checking for apptainer binary...
[2026-01-15 15:15:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 15:15:15] Running /usr/bin/apptainer --version
[2026-01-15 15:15:15] apptainer version 1.4.5
[2026-01-15 15:15:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 15:15:15] Starfish-Cruncher
[2026-01-15 15:15:15] apptainer works
[2026-01-15 15:15:15] Set ATHENA_PROC_NUMBER=4
[2026-01-15 15:15:15] Set ATHENA_CORE_NUMBER=4
[2026-01-15 15:15:16] Starting ATLAS job with PandaID=6970457191
[2026-01-15 15:15:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 16:50:00]  *** The last 200 lines of the pilot log: ***
[2026-01-15 16:50:00]  is_tar=False
[2026-01-15 16:50:00]  lfn=log.48188632._000125.job.log.tgz.1
[2026-01-15 16:50:00]  mtime=0
[2026-01-15 16:50:00]  protocol_id=None
[2026-01-15 16:50:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 16:50:00]  replicas=None
[2026-01-15 16:50:00]  scope=mc23_13p6TeV
[2026-01-15 16:50:00]  status=None
[2026-01-15 16:50:00]  status_code=0
[2026-01-15 16:50:00]  storage_token=
[2026-01-15 16:50:00]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6970457191/log.48188632._000125.job.log.tgz.1
[2026-01-15 16:50:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0d/log.48188632._000125.job.log.tgz.1
[2026-01-15 16:50:00]  workdir=None
[2026-01-15 16:50:00] ]
[2026-01-15 16:50:00] 2026-01-15 22:49:25,618 | INFO     | transferring file log.48188632._000125.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6970457191/log.48188632._000125.job.log.tgz.1 to /var/lib/boinc
[2026-01-15 16:50:00] 2026-01-15 22:49:25,618 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6970457191/log.48188632._000125.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.481886
[2026-01-15 16:50:00] 2026-01-15 22:49:25,628 | INFO     | adding to output.list: log.48188632._000125.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0d/log.48188632._000125.job.log.tg
[2026-01-15 16:50:00] 2026-01-15 22:49:25,629 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 16:50:00] 2026-01-15 22:49:25,629 | INFO     | summary of transferred files:
[2026-01-15 16:50:00] 2026-01-15 22:49:25,629 | INFO     |  -- lfn=log.48188632._000125.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 16:50:00] 2026-01-15 22:49:25,629 | INFO     | stage-out finished correctly
[2026-01-15 16:50:00] 2026-01-15 22:49:25,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 16:50:00] 2026-01-15 22:49:26,688 | INFO     | PID=946963 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 16:50:00] 2026-01-15 22:49:26,688 | INFO     | .. there are 4 such processes running
[2026-01-15 16:50:00] 2026-01-15 22:49:27,361 | INFO     | monitor loop #421: job 0:6970457191 is in state 'finished'
[2026-01-15 16:50:00] 2026-01-15 22:49:27,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:50:00] 2026-01-15 22:49:27,367 | INFO     | job 6970457191 has state=finished
[2026-01-15 16:50:00] 2026-01-15 22:49:27,367 | INFO     | preparing for final server update for job 6970457191 in state='finished'
[2026-01-15 16:50:00] 2026-01-15 22:49:27,597 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 16:50:00] 2026-01-15 22:49:27,597 | INFO     | this job has now completed (state=finished)
[2026-01-15 16:50:00] 2026-01-15 22:49:27,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 16:50:00] 2026-01-15 22:49:27,597 | INFO     | log transfer has been attempted: DONE
[2026-01-15 16:50:00] 2026-01-15 22:49:27,598 | INFO     | job 6970457191 has finished - writing final server update
[2026-01-15 16:50:00] 2026-01-15 22:49:27,598 | INFO     | total number of processed events: 400 (read)
[2026-01-15 16:50:00] 2026-01-15 22:49:27,598 | INFO     | executing command: lscpu
[2026-01-15 16:50:00] 2026-01-15 22:49:27,616 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 16:50:00] 2026-01-15 22:49:27,688 | INFO     | time since job start (5642s) is within the limit (349056.0s)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,479 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 16:50:00] 2026-01-15 22:49:29,482 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3702.6352500000003
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6970457191/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | INFO     | extracted standard info from prmon json
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 16:50:00] 2026-01-15 22:49:29,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 16:50:00] 2026-01-15 22:49:29,486 | INFO     | fitting pss+swap vs Time
[2026-01-15 16:50:00] 2026-01-15 22:49:29,486 | INFO     | sum of square deviations: 197203697.5
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | sum of deviations: -1244943815.0
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | mean x: 1768514644.5
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | mean y: 2346787.1860465114
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | intersect: 11166951692.259892
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | chi2: 0.0008517103446036285
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | current memory leak: -6.31 B/s (using 86 data points, chi2=0.00)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | could have reported an average CPU frequency of 3607 MHz (7 samples)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | ..............................
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . Timing measurements:
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . get job = 0 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . initial setup = 3 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . payload setup = 4 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . stage-in = 0 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . payload execution = 5618 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . stage-out = 0 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | . log creation = 0 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,487 | INFO     | ..............................
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | 
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | job summary report
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | --------------------------------------------------
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | PanDA job id: 6970457191
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | task id: 48188632
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | errors: (none)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | pilot state: finished 
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | transexitcode: 0
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | exeerrorcode: 0
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | exeerrordiag: 
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | exitcode: 0
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | exitmsg: OK
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | cpuconsumptiontime: 21614 s
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | nevents: 400
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | neventsw: 0
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | pid: 953817
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | pgrp: 953817
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | corecount: 4
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | event service: False
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | sizes: {0: 2284002, 1: 2284144, 4: 2284406, 11: 2284434, 5626: 2320184, 5630: 2320322}
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | --------------------------------------------------
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | 
[2026-01-15 16:50:00] 2026-01-15 22:49:29,525 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | job 6970457191 has completed (purged errors)
[2026-01-15 16:50:00] 2026-01-15 22:49:29,538 | INFO     | overall cleanup function is called
[2026-01-15 16:50:00] 2026-01-15 22:49:30,546 | INFO     | --- collectZombieJob: --- 10, [953817]
[2026-01-15 16:50:00] 2026-01-15 22:49:30,546 | INFO     | zombie collector waiting for pid 953817
[2026-01-15 16:50:00] 2026-01-15 22:49:30,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 16:50:00] 2026-01-15 22:49:30,546 | INFO     | collected zombie processes
[2026-01-15 16:50:00] 2026-01-15 22:49:30,546 | INFO     | will attempt to kill all subprocesses of pid=953817
[2026-01-15 16:50:00] 2026-01-15 22:49:30,634 | INFO     | process IDs to be killed: [953817] (in reverse order)
[2026-01-15 16:50:00] 2026-01-15 22:49:30,668 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 16:50:00] 2026-01-15 22:49:30,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 16:50:00] 2026-01-15 22:49:30,671 | INFO     | did not find any defunct processes belonging to 953817
[2026-01-15 16:50:00] 2026-01-15 22:49:30,673 | INFO     | did not find any defunct processes belonging to 953817
[2026-01-15 16:50:00] 2026-01-15 22:49:30,673 | INFO     | ready for new job
[2026-01-15 16:50:00] 2026-01-15 22:49:30,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 16:50:00] 2026-01-15 22:49:30,674 | INFO     | ***************************************
[2026-01-15 16:50:00] 2026-01-15 22:49:30,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 16:50:00] 2026-01-15 22:49:30,674 | INFO     | ***************************************
[2026-01-15 16:50:00] 2026-01-15 22:49:30,674 | INFO     | 
[2026-01-15 16:50:00] 2026-01-15 22:49:30,675 | INFO     | architecture information:
[2026-01-15 16:50:00] 2026-01-15 22:49:30,675 | INFO     | executing command: cat /etc/os-release
[2026-01-15 16:50:00] 2026-01-15 22:49:30,683 | INFO     | cat /etc/os-release:
[2026-01-15 16:50:00] NAME="CentOS Linux"
[2026-01-15 16:50:00] VERSION="7 (Core)"
[2026-01-15 16:50:00] ID="centos"
[2026-01-15 16:50:00] ID_LIKE="rhel fedora"
[2026-01-15 16:50:00] VERSION_ID="7"
[2026-01-15 16:50:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 16:50:00] ANSI_COLOR="0;31"
[2026-01-15 16:50:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 16:50:00] HOME_URL="https://www.centos.org/"
[2026-01-15 16:50:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 16:50:00] 
[2026-01-15 16:50:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 16:50:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 16:50:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 16:50:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 16:50:00] 
[2026-01-15 16:50:00] 2026-01-15 22:49:30,683 | INFO     | ***************************************
[2026-01-15 16:50:00] 2026-01-15 22:49:31,186 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-15 16:50:00] 2026-01-15 22:49:31,195 | INFO     | sufficient remaining disk space (1817859588096 B)
[2026-01-15 16:50:00] 2026-01-15 22:49:31,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 16:50:00] 2026-01-15 22:49:31,195 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 16:50:00] 2026-01-15 22:49:31,195 | INFO     | update_server=False
[2026-01-15 16:50:00] 2026-01-15 22:49:31,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 16:50:00] 2026-01-15 22:49:31,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:50:00] 2026-01-15 22:49:31,196 | INFO     | aborting loop
[2026-01-15 16:50:00] 2026-01-15 22:49:31,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 16:50:00] 2026-01-15 22:49:31,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:50:00] 2026-01-15 22:49:31,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 16:50:00] 2026-01-15 22:49:31,717 | INFO     | all job control threads have been joined
[2026-01-15 16:50:00] 2026-01-15 22:49:31,971 | INFO     | all payload control threads have been joined
[2026-01-15 16:50:00] 2026-01-15 22:49:32,201 | INFO     | [job] retrieve thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,201 | INFO     | [job] job monitor thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,201 | INFO     | [job] queue monitor thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,209 | INFO     | all data control threads have been joined
[2026-01-15 16:50:00] 2026-01-15 22:49:32,221 | INFO     | [payload] failed_post thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,528 | INFO     | [job] validate thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,670 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,722 | INFO     | [job] control thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,747 | INFO     | [payload] validate_post thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,881 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:32,976 | INFO     | [payload] control thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:33,027 | INFO     | [data] copytool_in thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:33,201 | INFO     | [data] copytool_out thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:33,215 | INFO     | [data] control thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:33,480 | INFO     | [monitor] cgroup control has ended
[2026-01-15 16:50:00] 2026-01-15 22:49:33,523 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:35,702 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:41,524 | INFO     | job.realtimelogging is not enabled
[2026-01-15 16:50:00] 2026-01-15 22:49:42,529 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 16:50:00] 2026-01-15 22:49:42,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136925509818176)>', '<ExcThread(monitor, started 136925017003776)>']
[2026-01-15 16:50:00] 2026-01-15 22:49:47,904 | INFO     | all workflow threads have been joined
[2026-01-15 16:50:00] 2026-01-15 22:49:47,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 16:50:00] 2026-01-15 22:49:47,905 | INFO     | traces error code: 0
[2026-01-15 16:50:00] 2026-01-15 22:49:47,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 16:50:00] 2026-01-15 22:50:00,858 | INFO     | PID=946963 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | INFO     | .. there are 3 such processes running
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 16:50:00] 2026-01-15 22:50:00,859 | INFO     | [monitor] control thread has ended
[2026-01-15 16:50:00] 2026-01-15 22:50:00,906 [wrapper] ==== pilot stdout END ====
[2026-01-15 16:50:00] 2026-01-15 22:50:00,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 16:50:00] 2026-01-15 22:50:00,909 [wrapper] pilotpid: 946963
[2026-01-15 16:50:00] 2026-01-15 22:50:00,911 [wrapper] Pilot exit status: 0
[2026-01-15 16:50:00] 2026-01-15 22:50:00,916 [wrapper] pandaids: 6970457191
[2026-01-15 16:50:00] 2026-01-15 22:50:00,938 [wrapper] cleanup supervisor_pilot 1109997 946964
[2026-01-15 16:50:00] 2026-01-15 22:50:00,939 [wrapper] Test setup, not cleaning
[2026-01-15 16:50:00] 2026-01-15 22:50:00,941 [wrapper] apfmon messages muted
[2026-01-15 16:50:00] 2026-01-15 22:50:00,942 [wrapper] ==== wrapper stdout END ====
[2026-01-15 16:50:00] 2026-01-15 22:50:00,944 [wrapper] ==== wrapper stderr END ====
[2026-01-15 16:50:00]  *** Error codes and diagnostics ***
[2026-01-15 16:50:00]     "exeErrorCode": 0,
[2026-01-15 16:50:00]     "exeErrorDiag": "",
[2026-01-15 16:50:00]     "pilotErrorCode": 0,
[2026-01-15 16:50:00]     "pilotErrorDiag": "",
[2026-01-15 16:50:00]  *** Listing of results directory ***
[2026-01-15 16:50:00] total 474460
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc    584422 Jan 15 04:40 pilot3.tar.gz
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc      5111 Jan 15 04:44 queuedata.json
[2026-01-15 16:50:00] -rwx------ 1 boinc boinc     36322 Jan 15 04:44 runpilot2-wrapper.sh
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc       100 Jan 15 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 16:50:00] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 15:15 run_atlas
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc       105 Jan 15 15:15 job.xml
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc      9664 Jan 15 15:15 init_data.xml
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc 290169433 Jan 15 15:15 EVNT.48188630._000006.pool.root.1
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc     15845 Jan 15 15:15 start_atlas.sh
[2026-01-15 16:50:00] drwxrwx--x 2 boinc boinc      4096 Jan 15 15:15 shared
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc    592410 Jan 15 15:15 input.tar.gz
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc         0 Jan 15 15:15 boinc_lockfile
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc      2617 Jan 15 15:15 pandaJob.out
[2026-01-15 16:50:00] -rw------- 1 boinc boinc   1004075 Jan 15 15:15 agis_schedconf.cvmfs.json
[2026-01-15 16:50:00] -rw------- 1 boinc boinc   1516246 Jan 15 15:15 agis_ddmendpoints.agis.ALL.json
[2026-01-15 16:50:00] drwx------ 5 boinc boinc      4096 Jan 15 15:15 pilot3
[2026-01-15 16:50:00] -rw------- 1 boinc boinc 189420805 Jan 15 16:49 HITS.48188632._000125.pool.root.1
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc       529 Jan 15 16:49 boinc_task_state.xml
[2026-01-15 16:50:00] -rw------- 1 boinc boinc      1034 Jan 15 16:49 memory_monitor_summary.json
[2026-01-15 16:50:00] -rw------- 1 boinc boinc    325659 Jan 15 16:49 log.48188632._000125.job.log.tgz.1
[2026-01-15 16:50:00] -rw------- 1 boinc boinc      7746 Jan 15 16:49 heartbeat.json
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc        27 Jan 15 16:49 wrapper_checkpoint.txt
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc      8192 Jan 15 16:49 boinc_mmap_file
[2026-01-15 16:50:00] -rw------- 1 boinc boinc       821 Jan 15 16:50 pilotlog.txt
[2026-01-15 16:50:00] -rw------- 1 boinc boinc        95 Jan 15 16:50 pilot_heartbeat.json
[2026-01-15 16:50:00] -rw------- 1 boinc boinc    832956 Jan 15 16:50 log.48188632._000125.job.log.1
[2026-01-15 16:50:00] -rw------- 1 boinc boinc       357 Jan 15 16:50 output.list
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc       620 Jan 15 16:50 runtime_log
[2026-01-15 16:50:00] -rw------- 1 boinc boinc   1177600 Jan 15 16:50 result.tar.gz
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc      8932 Jan 15 16:50 runtime_log.err
[2026-01-15 16:50:00] -rw------- 1 boinc boinc       652 Jan 15 16:50 F7qMDmN1Z08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmm5uKDmZCcH3n.diag
[2026-01-15 16:50:00] -rw-r--r-- 1 boinc boinc     21339 Jan 15 16:50 stderr.txt
[2026-01-15 16:50:00] HITS file was successfully produced:
[2026-01-15 16:50:00] -rw------- 1 boinc boinc 189420805 Jan 15 16:49 shared/HITS.pool.root.1
[2026-01-15 16:50:00]  *** Contents of shared directory: ***
[2026-01-15 16:50:00] total 470112
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc 290169433 Jan 15 15:15 ATLAS.root_0
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc     15845 Jan 15 15:15 start_atlas.sh
[2026-01-15 16:50:00] -rw-r--r-- 2 boinc boinc    592410 Jan 15 15:15 input.tar.gz
[2026-01-15 16:50:00] -rw------- 1 boinc boinc 189420805 Jan 15 16:49 HITS.pool.root.1
[2026-01-15 16:50:00] -rw------- 1 boinc boinc   1177600 Jan 15 16:50 result.tar.gz
16:50:02 (943066): run_atlas exited; CPU time 21686.675573
16:50:02 (943066): called boinc_finish(0)

</stderr_txt>
]]>

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