Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:58 (2067822): wrapper (7.7.26015): starting
10:54:58 (2067822): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:54:58] Arguments: --nthreads 8
[2026-01-15 10:54:58] Threads: 8
[2026-01-15 10:54:58] Checking for CVMFS
[2026-01-15 10:54:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:54:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:54:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:54:59] 2.13.3.0 7314 102196 162856 155177 2 232 27632377 40960000 36876 16776704 0 1249792217 99.710 942521330 50046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:54:59] CVMFS is ok
[2026-01-15 10:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:54:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:54:59] Further information can be found at the LHC@home message board.
[2026-01-15 10:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:54:59] Checking for apptainer binary...
[2026-01-15 10:54:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:54:59] Running /usr/bin/apptainer --version
[2026-01-15 10:54:59] apptainer version 1.4.5-2.el9
[2026-01-15 10:54:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:54:59] c8-16-1.aglt2.org
[2026-01-15 10:54:59] apptainer works
[2026-01-15 10:54:59] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:54:59] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:54:59] Starting ATLAS job with PandaID=6971197409
[2026-01-15 10:54:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:37:23]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:37:23] 2026-01-15 16:36:25,101 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:37:23] 2026-01-15 16:36:25,101 | INFO     | summary of transferred files:
[2026-01-15 11:37:23] 2026-01-15 16:36:25,101 | INFO     |  -- lfn=log.48215263._051977.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:37:23] 2026-01-15 16:36:25,101 | INFO     | stage-out finished correctly
[2026-01-15 11:37:23] 2026-01-15 16:36:25,177 | INFO     | time since job start (2472s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:25,254 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:37:23] 2026-01-15 16:36:26,215 | INFO     | job 6971197409 has state=finished
[2026-01-15 11:37:23] 2026-01-15 16:36:26,215 | INFO     | preparing for final server update for job 6971197409 in state='finished'
[2026-01-15 11:37:23] 2026-01-15 16:36:26,216 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:37:23] 2026-01-15 16:36:26,216 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:37:23] 2026-01-15 16:36:26,216 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:37:23] 2026-01-15 16:36:26,216 | INFO     | job 6971197409 has finished - writing final server update
[2026-01-15 11:37:23] 2026-01-15 16:36:26,216 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:37:23] 2026-01-15 16:36:26,220 | INFO     | executing command: lscpu
[2026-01-15 11:37:23] 2026-01-15 16:36:26,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:37:23] 2026-01-15 16:36:27,184 | INFO     | time since job start (2474s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:29,191 | INFO     | time since job start (2476s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:30,934 | WARNING  | process 2078973 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:37:23] 2026-01-15 16:36:30,934 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6971197409/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:37:23] 2026-01-15 16:36:31,203 | INFO     | time since job start (2478s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:31,615 | INFO     | number of running child processes to parent process 2078973: 1
[2026-01-15 11:37:23] 2026-01-15 16:36:31,615 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:37:23] 2026-01-15 16:36:33,210 | INFO     | time since job start (2480s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:34,126 | INFO     | monitor loop #171: job 0:6971197409 is in state 'finished'
[2026-01-15 11:37:23] 2026-01-15 16:36:34,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:37:23] 2026-01-15 16:36:35,217 | INFO     | time since job start (2482s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:36,631 | INFO     | monitor loop #172: job 0:6971197409 is in state 'finished'
[2026-01-15 11:37:23] 2026-01-15 16:36:36,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:37:23] 2026-01-15 16:36:37,223 | INFO     | time since job start (2484s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:39,137 | INFO     | monitor loop #173: job 0:6971197409 is in state 'finished'
[2026-01-15 11:37:23] 2026-01-15 16:36:39,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:37:23] 2026-01-15 16:36:39,230 | INFO     | time since job start (2486s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:41,237 | INFO     | time since job start (2488s) is within the limit (349056.0s)
[2026-01-15 11:37:23] 2026-01-15 16:36:41,653 | INFO     | monitor loop #174: job 0:6971197409 is in state 'finished'
[2026-01-15 11:37:23] 2026-01-15 16:36:41,653 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:37:23] 2026-01-15 16:36:42,907 | INFO     | PID=2072433 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:37:23] 2026-01-15 16:36:42,907 | INFO     | .. there are 31 such processes running
[2026-01-15 11:37:23] 2026-01-15 16:36:43,345 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:37:23] 2026-01-15 16:36:43,350 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3771.23590625
[2026-01-15 11:37:23] 2026-01-15 16:36:43,362 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6971197409/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,363 | INFO     | extracted standard info from prmon json
[2026-01-15 11:37:23] 2026-01-15 16:36:43,363 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:37:23] 2026-01-15 16:36:43,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:37:23] 2026-01-15 16:36:43,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:37:23] 2026-01-15 16:36:43,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | sum of square deviations: 12176972.5
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | sum of deviations: -327812413.99999994
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | mean x: 1768493852.5
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | mean y: 2552717.1764705884
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | intersect: 47611614734.20779
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | chi2: 0.0011814895682429182
[2026-01-15 11:37:23] 2026-01-15 16:36:43,364 | INFO     | current memory leak: -26.92 B/s (using 34 data points, chi2=0.00)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | could have reported an average CPU frequency of 3782 MHz (5 samples)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | ..............................
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . Timing measurements:
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . get job = 0 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . initial setup = 2 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . payload setup = 6 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . stage-in = 0 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . payload execution = 2448 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . stage-out = 0 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | . log creation = 0 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,365 | INFO     | ..............................
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | 
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | job summary report
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | --------------------------------------------------
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | PanDA job id: 6971197409
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | task id: 48215263
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | errors: (none)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | pilot state: finished 
[2026-01-15 11:37:23] 2026-01-15 16:36:43,445 | INFO     | transexitcode: 0
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | exeerrorcode: 0
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | exeerrordiag: 
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | exitcode: 0
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | exitmsg: OK
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | cpuconsumptiontime: 14872 s
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | nevents: 400
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | neventsw: 0
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | pid: 2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | pgrp: 2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | corecount: 8
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | event service: False
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | sizes: {0: 2283730, 1: 2283929, 6: 2284191, 11: 2284219, 2455: 2309539, 2456: 2318720, 2475: 2318890}
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | --------------------------------------------------
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | 
[2026-01-15 11:37:23] 2026-01-15 16:36:43,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 11:37:23] 2026-01-15 16:36:43,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,496 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | job 6971197409 has completed (purged errors)
[2026-01-15 11:37:23] 2026-01-15 16:36:43,497 | INFO     | overall cleanup function is called
[2026-01-15 11:37:23] 2026-01-15 16:36:44,506 | INFO     | --- collectZombieJob: --- 10, [2078973]
[2026-01-15 11:37:23] 2026-01-15 16:36:44,506 | INFO     | zombie collector waiting for pid 2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:44,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:37:23] 2026-01-15 16:36:44,506 | INFO     | collected zombie processes
[2026-01-15 11:37:23] 2026-01-15 16:36:44,506 | INFO     | will attempt to kill all subprocesses of pid=2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:45,209 | INFO     | process IDs to be killed: [2078973] (in reverse order)
[2026-01-15 11:37:23] 2026-01-15 16:36:45,412 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:37:23] 2026-01-15 16:36:45,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:37:23] 2026-01-15 16:36:45,463 | INFO     | did not find any defunct processes belonging to 2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:45,510 | INFO     | did not find any defunct processes belonging to 2078973
[2026-01-15 11:37:23] 2026-01-15 16:36:45,510 | INFO     | ready for new job
[2026-01-15 11:37:23] 2026-01-15 16:36:45,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:37:23] 2026-01-15 16:36:45,511 | INFO     | ***************************************
[2026-01-15 11:37:23] 2026-01-15 16:36:45,511 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:37:23] 2026-01-15 16:36:45,511 | INFO     | ***************************************
[2026-01-15 11:37:23] 2026-01-15 16:36:45,511 | INFO     | 
[2026-01-15 11:37:23] 2026-01-15 16:36:45,520 | INFO     | architecture information:
[2026-01-15 11:37:23] 2026-01-15 16:36:45,524 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:37:23] 2026-01-15 16:36:45,587 | INFO     | cat /etc/os-release:
[2026-01-15 11:37:23] NAME="CentOS Linux"
[2026-01-15 11:37:23] VERSION="7 (Core)"
[2026-01-15 11:37:23] ID="centos"
[2026-01-15 11:37:23] ID_LIKE="rhel fedora"
[2026-01-15 11:37:23] VERSION_ID="7"
[2026-01-15 11:37:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:37:23] ANSI_COLOR="0;31"
[2026-01-15 11:37:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:37:23] HOME_URL="https://www.centos.org/"
[2026-01-15 11:37:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:37:23] 
[2026-01-15 11:37:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:37:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:37:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:37:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:37:23] 
[2026-01-15 11:37:23] 2026-01-15 16:36:45,587 | INFO     | ***************************************
[2026-01-15 11:37:23] 2026-01-15 16:36:46,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 11:37:23] 2026-01-15 16:36:46,129 | INFO     | sufficient remaining disk space (163676422144 B)
[2026-01-15 11:37:23] 2026-01-15 16:36:46,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:37:23] 2026-01-15 16:36:46,130 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:37:23] 2026-01-15 16:36:46,130 | INFO     | update_server=False
[2026-01-15 11:37:23] 2026-01-15 16:36:46,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:37:23] 2026-01-15 16:36:46,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:37:23] 2026-01-15 16:36:46,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:37:23] 2026-01-15 16:36:46,134 | INFO     | aborting loop
[2026-01-15 11:37:23] 2026-01-15 16:36:46,554 | INFO     | all payload control threads have been joined
[2026-01-15 11:37:23] 2026-01-15 16:36:47,071 | INFO     | all data control threads have been joined
[2026-01-15 11:37:23] 2026-01-15 16:36:47,135 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:47,140 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:47,196 | INFO     | all job control threads have been joined
[2026-01-15 11:37:23] 2026-01-15 16:36:47,228 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:47,560 | INFO     | [payload] control thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,043 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,077 | INFO     | [data] control thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,137 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,197 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,202 | INFO     | [job] control thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:37:23] 2026-01-15 16:36:48,480 | INFO     | [job] validate thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,542 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:48,658 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:49,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:37:23] 2026-01-15 16:36:49,471 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:53,392 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:36:56,463 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:37:23] 2026-01-15 16:36:57,469 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:37:23] 2026-01-15 16:37:15,704 | INFO     | PID=2072433 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:37:23] 2026-01-15 16:37:15,704 | INFO     | .. there are 31 such processes running
[2026-01-15 11:37:23] 2026-01-15 16:37:15,705 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:37:23] 2026-01-15 16:37:15,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:37:23] 2026-01-15 16:37:15,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:37:23] 2026-01-15 16:37:16,895 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:37:23] 2026-01-15 16:37:17,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185906247488)>', '<ExcThread(monitor, started 140185048184576)>']
[2026-01-15 11:37:23] 2026-01-15 16:37:17,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:37:23] 2026-01-15 16:37:17,717 | INFO     | [monitor] control thread has ended
[2026-01-15 11:37:23] 2026-01-15 16:37:22,714 | INFO     | all workflow threads have been joined
[2026-01-15 11:37:23] 2026-01-15 16:37:22,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:37:23] 2026-01-15 16:37:22,714 | INFO     | traces error code: 0
[2026-01-15 11:37:23] 2026-01-15 16:37:22,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:37:23] 2026-01-15 16:37:22,842 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:37:23] 2026-01-15 16:37:22,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:37:23] 2026-01-15 16:37:22,847 [wrapper] pilotpid: 2072433
[2026-01-15 11:37:23] 2026-01-15 16:37:22,849 [wrapper] Pilot exit status: 0
[2026-01-15 11:37:23] 2026-01-15 16:37:22,877 [wrapper] pandaids: 6971197409
[2026-01-15 11:37:23] 2026-01-15 16:37:23,008 [wrapper] cleanup supervisor_pilot 2305529 2072434
[2026-01-15 11:37:23] 2026-01-15 16:37:23,019 [wrapper] Test setup, not cleaning
[2026-01-15 11:37:23] 2026-01-15 16:37:23,021 [wrapper] apfmon messages muted
[2026-01-15 11:37:23] 2026-01-15 16:37:23,023 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:37:23] 2026-01-15 16:37:23,026 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:37:23]  *** Error codes and diagnostics ***
[2026-01-15 11:37:23]     "exeErrorCode": 0,
[2026-01-15 11:37:23]     "exeErrorDiag": "",
[2026-01-15 11:37:23]     "pilotErrorCode": 0,
[2026-01-15 11:37:23]     "pilotErrorDiag": "",
[2026-01-15 11:37:23]  *** Listing of results directory ***
[2026-01-15 11:37:23] total 733328
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:40 queuedata.json
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 11:37:23] -rwx------. 1 boincer umatlas     36322 Jan 15 05:40 runpilot2-wrapper.sh
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:37:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:54 run_atlas
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:54 job.xml
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas 593873198 Jan 15 10:54 EVNT.32794306._001622.pool.root.1
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 10:54 start_atlas.sh
[2026-01-15 11:37:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:54 shared
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas    592401 Jan 15 10:54 input.tar.gz
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:54 boinc_lockfile
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:54 pandaJob.out
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas        57 Jan 15 10:54 setup.sh.local
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:55 agis_schedconf.cvmfs.json
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:55 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:37:23] drwx------. 5 boincer umatlas      4096 Jan 15 10:55 pilot3
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas      7172 Jan 15 11:29 init_data.xml
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:36 boinc_task_state.xml
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas 151736863 Jan 15 11:36 HITS.48215263._051977.pool.root.1
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas      1048 Jan 15 11:36 memory_monitor_summary.json
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas    303435 Jan 15 11:36 log.48215263._051977.job.log.tgz.1
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas      7803 Jan 15 11:36 heartbeat.json
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas        95 Jan 15 11:37 pilot_heartbeat.json
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:37 boinc_mmap_file
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:37 wrapper_checkpoint.txt
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas      4897 Jan 15 11:37 pilotlog.txt
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas    383418 Jan 15 11:37 log.48215263._051977.job.log.1
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas       357 Jan 15 11:37 output.list
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:37 runtime_log
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas    706560 Jan 15 11:37 result.tar.gz
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas      9336 Jan 15 11:37 runtime_log.err
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas       655 Jan 15 11:37 bjTMDmJxZ08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN2uKDmFKN9Sm.diag
[2026-01-15 11:37:23] -rw-r--r--. 1 boincer umatlas     22297 Jan 15 11:37 stderr.txt
[2026-01-15 11:37:23] HITS file was successfully produced:
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas 151736863 Jan 15 11:36 shared/HITS.pool.root.1
[2026-01-15 11:37:23]  *** Contents of shared directory: ***
[2026-01-15 11:37:23] total 729436
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas 593873198 Jan 15 10:54 ATLAS.root_0
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 10:54 start_atlas.sh
[2026-01-15 11:37:23] -rw-r--r--. 2 boincer umatlas    592401 Jan 15 10:54 input.tar.gz
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas 151736863 Jan 15 11:36 HITS.pool.root.1
[2026-01-15 11:37:23] -rw-------. 1 boincer umatlas    706560 Jan 15 11:37 result.tar.gz
11:37:24 (2067822): run_atlas exited; CPU time 14940.786004
11:37:24 (2067822): called boinc_finish(0)

</stderr_txt>
]]>

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