Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:26:07 (1639307): wrapper (7.7.26015): starting
11:26:07 (1639307): wrapper: running run_atlas (--nthreads 11)
[2026-01-15 11:26:07] Arguments: --nthreads 11
[2026-01-15 11:26:07] Threads: 11
[2026-01-15 11:26:07] Checking for CVMFS
[2026-01-15 11:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:26:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:26:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:26:07] 2.13.3.0 7100 102225 157592 155179 3 148 24607208 40960000 31552 16776704 0 1146420871 99.700 866062914 49376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 11:26:07] CVMFS is ok
[2026-01-15 11:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:26:07] Further information can be found at the LHC@home message board.
[2026-01-15 11:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:26:07] Checking for apptainer binary...
[2026-01-15 11:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:26:07] Running /usr/bin/apptainer --version
[2026-01-15 11:26:07] apptainer version 1.4.5-2.el9
[2026-01-15 11:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:26:08] c8-6-10.aglt2.org
[2026-01-15 11:26:08] apptainer works
[2026-01-15 11:26:08] Set ATHENA_PROC_NUMBER=11
[2026-01-15 11:26:08] Set ATHENA_CORE_NUMBER=11
[2026-01-15 11:26:08] Starting ATLAS job with PandaID=6970457142
[2026-01-15 11:26:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:37:41]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:37:42] 2026-01-15 17:36:20,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:37:42] 2026-01-15 17:36:21,513 | INFO     | time since job start (4194s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:23,097 | INFO     | monitor loop #270: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:23,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:23,520 | INFO     | time since job start (4196s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:25,527 | INFO     | time since job start (4198s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:25,602 | INFO     | monitor loop #271: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:25,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:28,121 | INFO     | monitor loop #272: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:28,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:28,284 | INFO     | PID=1645699 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 12:37:42] 2026-01-15 17:36:28,284 | INFO     | .. there are 25 such processes running
[2026-01-15 12:37:42] 2026-01-15 17:36:29,288 | INFO     | time since job start (4202s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:30,625 | INFO     | monitor loop #273: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:30,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:31,295 | INFO     | time since job start (4204s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:33,137 | INFO     | monitor loop #274: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:33,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:33,302 | INFO     | time since job start (4206s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:35,309 | INFO     | time since job start (4208s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:35,646 | INFO     | monitor loop #275: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:35,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:37,325 | INFO     | time since job start (4210s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:38,165 | INFO     | monitor loop #276: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:38,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:39,332 | INFO     | time since job start (4212s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:40,677 | INFO     | monitor loop #277: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:40,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:41,348 | INFO     | time since job start (4214s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:43,186 | INFO     | monitor loop #278: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:43,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:43,360 | INFO     | time since job start (4216s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:45,367 | INFO     | time since job start (4218s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:45,691 | INFO     | monitor loop #279: job 0:6970457142 is in state 'finished'
[2026-01-15 12:37:42] 2026-01-15 17:36:45,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:37:42] 2026-01-15 17:36:47,374 | INFO     | time since job start (4220s) is within the limit (349056.0s)
[2026-01-15 12:37:42] 2026-01-15 17:36:47,374 | INFO     | 4222s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 12:37:42] 2026-01-15 17:36:48,002 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:37:42] 2026-01-15 17:36:48,007 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3736.7821640624998
[2026-01-15 12:37:42] 2026-01-15 17:36:48,021 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970457142/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,022 | INFO     | extracted standard info from prmon json
[2026-01-15 12:37:42] 2026-01-15 17:36:48,022 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:37:42] 2026-01-15 17:36:48,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:37:42] 2026-01-15 17:36:48,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:37:42] 2026-01-15 17:36:48,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | sum of square deviations: 73882315.5
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | sum of deviations: -5388262095.5
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | mean x: 1768496586.5
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | mean y: 2781806.209677419
[2026-01-15 12:37:42] 2026-01-15 17:36:48,023 | INFO     | intersect: 128979832113.4525
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | chi2: 0.01399164999969105
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | current memory leak: -72.93 B/s (using 62 data points, chi2=0.01)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | could have reported an average CPU frequency of 3774 MHz (6 samples)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | ..............................
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . Timing measurements:
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . get job = 0 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . initial setup = 2 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . payload setup = 8 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . stage-in = 0 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . payload execution = 4155 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . stage-out = 3 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | . log creation = 0 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,024 | INFO     | ..............................
[2026-01-15 12:37:42] 2026-01-15 17:36:48,188 | INFO     | 
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | job summary report
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | --------------------------------------------------
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | PanDA job id: 6970457142
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | task id: 48188632
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | errors: (none)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | pilot state: finished 
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | transexitcode: 0
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | exeerrorcode: 0
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | exeerrordiag: 
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | exitcode: 0
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | exitmsg: OK
[2026-01-15 12:37:42] 2026-01-15 17:36:48,189 | INFO     | cpuconsumptiontime: 21682 s
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | nevents: 400
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | neventsw: 0
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | pid: 1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | pgrp: 1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | corecount: 11
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | event service: False
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | sizes: {0: 2284099, 9: 2284361, 11: 2284389, 4168: 2310316, 4172: 2319370, 4202: 2319508}
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | --------------------------------------------------
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | 
[2026-01-15 12:37:42] 2026-01-15 17:36:48,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 12:37:42] 2026-01-15 17:36:48,334 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,334 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,334 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | job 6970457142 has completed (purged errors)
[2026-01-15 12:37:42] 2026-01-15 17:36:48,335 | INFO     | overall cleanup function is called
[2026-01-15 12:37:42] 2026-01-15 17:36:49,353 | INFO     | --- collectZombieJob: --- 10, [1657567]
[2026-01-15 12:37:42] 2026-01-15 17:36:49,353 | INFO     | zombie collector waiting for pid 1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:49,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:37:42] 2026-01-15 17:36:49,353 | INFO     | collected zombie processes
[2026-01-15 12:37:42] 2026-01-15 17:36:49,353 | INFO     | will attempt to kill all subprocesses of pid=1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:50,786 | INFO     | process IDs to be killed: [1657567] (in reverse order)
[2026-01-15 12:37:42] 2026-01-15 17:36:51,044 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:37:42] 2026-01-15 17:36:51,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:37:42] 2026-01-15 17:36:51,119 | INFO     | did not find any defunct processes belonging to 1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:51,253 | INFO     | did not find any defunct processes belonging to 1657567
[2026-01-15 12:37:42] 2026-01-15 17:36:51,254 | INFO     | ready for new job
[2026-01-15 12:37:42] 2026-01-15 17:36:51,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:37:42] 2026-01-15 17:36:51,256 | INFO     | ***************************************
[2026-01-15 12:37:42] 2026-01-15 17:36:51,256 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:37:42] 2026-01-15 17:36:51,256 | INFO     | ***************************************
[2026-01-15 12:37:42] 2026-01-15 17:36:51,257 | INFO     | 
[2026-01-15 12:37:42] 2026-01-15 17:36:51,278 | INFO     | architecture information:
[2026-01-15 12:37:42] 2026-01-15 17:36:51,279 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:37:42] 2026-01-15 17:36:51,347 | INFO     | cat /etc/os-release:
[2026-01-15 12:37:42] NAME="CentOS Linux"
[2026-01-15 12:37:42] VERSION="7 (Core)"
[2026-01-15 12:37:42] ID="centos"
[2026-01-15 12:37:42] ID_LIKE="rhel fedora"
[2026-01-15 12:37:42] VERSION_ID="7"
[2026-01-15 12:37:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:37:42] ANSI_COLOR="0;31"
[2026-01-15 12:37:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:37:42] HOME_URL="https://www.centos.org/"
[2026-01-15 12:37:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:37:42] 
[2026-01-15 12:37:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:37:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:37:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:37:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:37:42] 
[2026-01-15 12:37:42] 2026-01-15 17:36:51,347 | INFO     | ***************************************
[2026-01-15 12:37:42] 2026-01-15 17:36:51,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 12:37:42] 2026-01-15 17:36:52,043 | INFO     | sufficient remaining disk space (170419814400 B)
[2026-01-15 12:37:42] 2026-01-15 17:36:52,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:37:42] 2026-01-15 17:36:52,044 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:37:42] 2026-01-15 17:36:52,044 | INFO     | update_server=False
[2026-01-15 12:37:42] 2026-01-15 17:36:52,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:37:42] 2026-01-15 17:36:52,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:37:42] 2026-01-15 17:36:52,052 | INFO     | aborting loop
[2026-01-15 12:37:42] 2026-01-15 17:36:52,447 | INFO     | all data control threads have been joined
[2026-01-15 12:37:42] 2026-01-15 17:36:52,839 | INFO     | all job control threads have been joined
[2026-01-15 12:37:42] 2026-01-15 17:36:53,050 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,058 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:37:42] 2026-01-15 17:36:53,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:37:42] 2026-01-15 17:36:53,299 | INFO     | all payload control threads have been joined
[2026-01-15 12:37:42] 2026-01-15 17:36:53,455 | INFO     | [data] control thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,489 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,509 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,524 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,845 | INFO     | [job] control thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,897 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:53,969 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:54,226 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:54,305 | INFO     | [payload] control thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:54,438 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:54,457 | INFO     | [job] validate thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:55,212 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:36:55,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:37:42] 2026-01-15 17:36:59,501 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:37:02,716 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:37:42] 2026-01-15 17:37:03,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:37:42] 2026-01-15 17:37:23,128 | INFO     | PID=1645699 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:37:42] 2026-01-15 17:37:23,129 | INFO     | .. there are 25 such processes running
[2026-01-15 12:37:42] 2026-01-15 17:37:23,129 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:37:42] 2026-01-15 17:37:23,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:37:42] 2026-01-15 17:37:23,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:37:42] 2026-01-15 17:37:34,420 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:37:42] 2026-01-15 17:37:35,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136458053440)>', '<ExcThread(monitor, started 140136100644608)>']
[2026-01-15 12:37:42] 2026-01-15 17:37:36,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:37:42] 2026-01-15 17:37:36,210 | INFO     | [monitor] control thread has ended
[2026-01-15 12:37:42] 2026-01-15 17:37:40,470 | INFO     | all workflow threads have been joined
[2026-01-15 12:37:42] 2026-01-15 17:37:40,470 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:37:42] 2026-01-15 17:37:40,470 | INFO     | traces error code: 0
[2026-01-15 12:37:42] 2026-01-15 17:37:40,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:37:42] 2026-01-15 17:37:40,765 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:37:42] 2026-01-15 17:37:40,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:37:42] 2026-01-15 17:37:40,828 [wrapper] pilotpid: 1645699
[2026-01-15 12:37:42] 2026-01-15 17:37:40,851 [wrapper] Pilot exit status: 0
[2026-01-15 12:37:42] 2026-01-15 17:37:40,962 [wrapper] pandaids: 6970457142
[2026-01-15 12:37:42] 2026-01-15 17:37:41,363 [wrapper] cleanup supervisor_pilot 2096249 1645700
[2026-01-15 12:37:42] 2026-01-15 17:37:41,400 [wrapper] Test setup, not cleaning
[2026-01-15 12:37:42] 2026-01-15 17:37:41,420 [wrapper] apfmon messages muted
[2026-01-15 12:37:42] 2026-01-15 17:37:41,438 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:37:42] 2026-01-15 17:37:41,459 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:37:42]  *** Error codes and diagnostics ***
[2026-01-15 12:37:42]     "exeErrorCode": 0,
[2026-01-15 12:37:42]     "exeErrorDiag": "",
[2026-01-15 12:37:42]     "pilotErrorCode": 0,
[2026-01-15 12:37:42]     "pilotErrorDiag": "",
[2026-01-15 12:37:42]  *** Listing of results directory ***
[2026-01-15 12:37:42] total 475616
[2026-01-15 12:37:42] -rwx------. 1 boincer umatlas     36322 Jan 15 05:40 runpilot2-wrapper.sh
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:40 queuedata.json
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:37:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:26 run_atlas
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:26 job.xml
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas 290060777 Jan 15 11:26 EVNT.48188630._000004.pool.root.1
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:26 start_atlas.sh
[2026-01-15 12:37:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:26 shared
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas    592398 Jan 15 11:26 input.tar.gz
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:26 boinc_lockfile
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas      2612 Jan 15 11:26 pandaJob.out
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas        57 Jan 15 11:26 setup.sh.local
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas   1004091 Jan 15 11:26 agis_schedconf.cvmfs.json
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:26 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:37:42] drwx------. 5 boincer umatlas      4096 Jan 15 11:26 pilot3
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 12:29 init_data.xml
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas 191103910 Jan 15 12:34 HITS.48188632._000076.pool.root.1
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas       529 Jan 15 12:34 boinc_task_state.xml
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas      1051 Jan 15 12:36 memory_monitor_summary.json
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas    376360 Jan 15 12:36 log.48188632._000076.job.log.tgz.1
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas      7794 Jan 15 12:36 heartbeat.json
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas        95 Jan 15 12:37 pilot_heartbeat.json
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:37 boinc_mmap_file
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas      4897 Jan 15 12:37 pilotlog.txt
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:37 wrapper_checkpoint.txt
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas    586413 Jan 15 12:37 log.48188632._000076.job.log.1
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas       357 Jan 15 12:37 output.list
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:37 runtime_log
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas    983040 Jan 15 12:37 result.tar.gz
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas      9338 Jan 15 12:37 runtime_log.err
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas       656 Jan 15 12:37 kjZMDmJxZ08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEpoKDmmHwgWo.diag
[2026-01-15 12:37:42] -rw-r--r--. 1 boincer umatlas     22431 Jan 15 12:37 stderr.txt
[2026-01-15 12:37:42] HITS file was successfully produced:
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas 191103910 Jan 15 12:34 shared/HITS.pool.root.1
[2026-01-15 12:37:42]  *** Contents of shared directory: ***
[2026-01-15 12:37:42] total 471456
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas 290060777 Jan 15 11:26 ATLAS.root_0
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 11:26 start_atlas.sh
[2026-01-15 12:37:42] -rw-r--r--. 2 boincer umatlas    592398 Jan 15 11:26 input.tar.gz
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas 191103910 Jan 15 12:34 HITS.pool.root.1
[2026-01-15 12:37:42] -rw-------. 1 boincer umatlas    983040 Jan 15 12:37 result.tar.gz
12:37:43 (1639307): run_atlas exited; CPU time 21749.955671
12:37:43 (1639307): called boinc_finish(0)

</stderr_txt>
]]>

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